| Definition | Xanthomonas campestris pv. vesicatoria str. 85-10 chromosome, complete genome. |
|---|---|
| Accession | NC_007508 |
| Length | 5,178,466 |
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The map label for this gene is pykA [H]
Identifier: 78049019
GI number: 78049019
Start: 3965722
End: 3967188
Strand: Reverse
Name: pykA [H]
Synonym: XCV3463
Alternate gene names: 78049019
Gene position: 3967188-3965722 (Counterclockwise)
Preceding gene: 78049020
Following gene: 78049018
Centisome position: 76.61
GC content: 65.1
Gene sequence:
>1467_bases ATGAAAGAACGTCAACGCCGCACCAAGATCCTCGCCACCCTCGGACCGGCAACGGATGCGCCCGGTGTGCTGGATACGCT GTTCAAGGCGGGCGTCAACGTGGTGCGCCTCAACTTCAGCCATGGCGACCCCTCTGGCCAGGCCAAGCGCGCCGCCGAAG TACGTGCCGCTGCAGCCCGCGTCGGTGCCGAGGTCGGCATCCTGGCCGACTTGCCAGGCCCGAAGATCCGTATCGAACGG TTTGCCGAAGGCAAGATCAAGCTGACCATGGGCGATCGCTTCGACCTGGTGGCCGATGCCAACGCGCCGGCTGGCGACCA GACGCAGGTTGGCGTCAGCTATCTGGGGCTGCCGCAGGACGTGACCGCCGGCGACGTGCTGCTGCTCGACGATGGCCTGA TGCAGTTGCAGGTGACCGATGTGCAGGGCGAGCGCATCGTCACCAAGGTGTTGAACGATGGTGTGCTGTCCGACCGCAAG GGCCTCAACAAGCAGGGCGGTGGTCTGTCGCTGGGCGCGTTGACCGAGCGCGACAAGGAACTGATCGGCATCGTGGCCAA GATCGGCGTGGACTTCATTGCGGTGTCGTTCTGTCGCAATGCGCAGGACATGCACGACGCGCGTCAGATCGCCCAGCAGC ACGGCTGCGATGCGCAACTGGTGTCCAAGATCGAGCGCACCGAGGCGATCGAAAACCTGGTCGAGATCGTCGAAGCCTCC GATGTGGTGATGGTGGCGCGTGGCGATCTGGGCGTTGAGATCGGTGACGCTGAATTGCCCGGCCTGCAGAAGAAGATCAT TCGCGAATCGCTGGCGCAGAATAAGGTGGTGATCACTGCCACGCAGATGCTGCAGTCGATGGTCGAAAGCCCGATCCCTA CCCGCGCCGAAGTGCTGGACGTGGCCAACGCGGTCATCGACGGTACCGATGCGGTGATGCTCTCGGCCGAGACCGCCGCC GGCGCCTATCCGGTGCGTGCGGTGGAAGCGATGGCGCGCATCTGCCTGGGGGCCGAACACCAGTTCGAATTCGACACCGA TTTCGAAGCGGCGCAACGCAATCTGCAGCGCGCCGACCAAGCGATTGCGATGGCAACCATGTTCCTGTCCGAGCACATCG GCCTGGGCGGCGTGGTGGCGTTGACCGAATCCGGCGGCACGCCGCGCTTCCTGTCGCGCTTCCGCTCCAATATGCCGATC TACGCCTTCACCCGTCACGATGGCGCGCGCCGCCAGATGGCCATGATGCGTGGCGTGTTCCCGATCAGCTTCGACAGCCG CGGCCTGACCCCGCGCGAAGCCGCGCGTGCGGCGATCCGTCTGCTGGTGGAGAACGAGCGCATGGGGCCTGGCGACCGCG TGGTCTTTACCAGTGGCGAGCACATGGAAACCCATGGCGCCACCAACACGCTGCGCCTGCTGGAAGTGGGCGAAGACGGT CGCGCCACCGGGCTGGGCGAGCTCTAA
Upstream 100 bases:
>100_bases TCTATAAGACATGCCGGAATCGGAGGAAGGCTATGCCGCAATGCCATCCTCGGTACGTGACGTGTGTGTTAAGTTTCGCG GCTTTTACAGGGAGGCCATC
Downstream 100 bases:
>100_bases CGCCTGTTGATTGCATCCGGCGCATGACCTGAGCCGGAACAGAGGCGACACACGACGGCGGCCCCAGGGCCGCCGTCGTG CTGTGTGGCGACCTGGCCGC
Product: pyruvate kinase
Products: NA
Alternate protein names: PK-2 [H]
Number of amino acids: Translated: 488; Mature: 488
Protein sequence:
>488_residues MKERQRRTKILATLGPATDAPGVLDTLFKAGVNVVRLNFSHGDPSGQAKRAAEVRAAAARVGAEVGILADLPGPKIRIER FAEGKIKLTMGDRFDLVADANAPAGDQTQVGVSYLGLPQDVTAGDVLLLDDGLMQLQVTDVQGERIVTKVLNDGVLSDRK GLNKQGGGLSLGALTERDKELIGIVAKIGVDFIAVSFCRNAQDMHDARQIAQQHGCDAQLVSKIERTEAIENLVEIVEAS DVVMVARGDLGVEIGDAELPGLQKKIIRESLAQNKVVITATQMLQSMVESPIPTRAEVLDVANAVIDGTDAVMLSAETAA GAYPVRAVEAMARICLGAEHQFEFDTDFEAAQRNLQRADQAIAMATMFLSEHIGLGGVVALTESGGTPRFLSRFRSNMPI YAFTRHDGARRQMAMMRGVFPISFDSRGLTPREAARAAIRLLVENERMGPGDRVVFTSGEHMETHGATNTLRLLEVGEDG RATGLGEL
Sequences:
>Translated_488_residues MKERQRRTKILATLGPATDAPGVLDTLFKAGVNVVRLNFSHGDPSGQAKRAAEVRAAAARVGAEVGILADLPGPKIRIER FAEGKIKLTMGDRFDLVADANAPAGDQTQVGVSYLGLPQDVTAGDVLLLDDGLMQLQVTDVQGERIVTKVLNDGVLSDRK GLNKQGGGLSLGALTERDKELIGIVAKIGVDFIAVSFCRNAQDMHDARQIAQQHGCDAQLVSKIERTEAIENLVEIVEAS DVVMVARGDLGVEIGDAELPGLQKKIIRESLAQNKVVITATQMLQSMVESPIPTRAEVLDVANAVIDGTDAVMLSAETAA GAYPVRAVEAMARICLGAEHQFEFDTDFEAAQRNLQRADQAIAMATMFLSEHIGLGGVVALTESGGTPRFLSRFRSNMPI YAFTRHDGARRQMAMMRGVFPISFDSRGLTPREAARAAIRLLVENERMGPGDRVVFTSGEHMETHGATNTLRLLEVGEDG RATGLGEL >Mature_488_residues MKERQRRTKILATLGPATDAPGVLDTLFKAGVNVVRLNFSHGDPSGQAKRAAEVRAAAARVGAEVGILADLPGPKIRIER FAEGKIKLTMGDRFDLVADANAPAGDQTQVGVSYLGLPQDVTAGDVLLLDDGLMQLQVTDVQGERIVTKVLNDGVLSDRK GLNKQGGGLSLGALTERDKELIGIVAKIGVDFIAVSFCRNAQDMHDARQIAQQHGCDAQLVSKIERTEAIENLVEIVEAS DVVMVARGDLGVEIGDAELPGLQKKIIRESLAQNKVVITATQMLQSMVESPIPTRAEVLDVANAVIDGTDAVMLSAETAA GAYPVRAVEAMARICLGAEHQFEFDTDFEAAQRNLQRADQAIAMATMFLSEHIGLGGVVALTESGGTPRFLSRFRSNMPI YAFTRHDGARRQMAMMRGVFPISFDSRGLTPREAARAAIRLLVENERMGPGDRVVFTSGEHMETHGATNTLRLLEVGEDG RATGLGEL
Specific function: Glycolysis; final step. [C]
COG id: COG0469
COG function: function code G; Pyruvate kinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the pyruvate kinase family [H]
Homologues:
Organism=Homo sapiens, GI33286422, Length=430, Percent_Identity=36.5116279069767, Blast_Score=249, Evalue=3e-66, Organism=Homo sapiens, GI33286420, Length=430, Percent_Identity=36.5116279069767, Blast_Score=249, Evalue=3e-66, Organism=Homo sapiens, GI33286418, Length=493, Percent_Identity=34.8884381338742, Blast_Score=246, Evalue=2e-65, Organism=Homo sapiens, GI10835121, Length=493, Percent_Identity=35.4969574036511, Blast_Score=243, Evalue=3e-64, Organism=Homo sapiens, GI32967597, Length=493, Percent_Identity=35.4969574036511, Blast_Score=243, Evalue=3e-64, Organism=Homo sapiens, GI310128732, Length=287, Percent_Identity=34.1463414634146, Blast_Score=147, Evalue=2e-35, Organism=Homo sapiens, GI310128730, Length=287, Percent_Identity=34.1463414634146, Blast_Score=147, Evalue=2e-35, Organism=Homo sapiens, GI310128736, Length=235, Percent_Identity=31.4893617021277, Blast_Score=119, Evalue=5e-27, Organism=Homo sapiens, GI310128734, Length=235, Percent_Identity=31.4893617021277, Blast_Score=119, Evalue=5e-27, Organism=Homo sapiens, GI310128738, Length=214, Percent_Identity=30.8411214953271, Blast_Score=104, Evalue=2e-22, Organism=Escherichia coli, GI1788160, Length=480, Percent_Identity=51.25, Blast_Score=462, Evalue=1e-131, Organism=Escherichia coli, GI1787965, Length=467, Percent_Identity=37.9014989293362, Blast_Score=300, Evalue=1e-82, Organism=Caenorhabditis elegans, GI17544584, Length=483, Percent_Identity=34.7826086956522, Blast_Score=267, Evalue=1e-71, Organism=Caenorhabditis elegans, GI17506831, Length=490, Percent_Identity=35.7142857142857, Blast_Score=238, Evalue=5e-63, Organism=Caenorhabditis elegans, GI17506829, Length=490, Percent_Identity=35.7142857142857, Blast_Score=238, Evalue=6e-63, Organism=Caenorhabditis elegans, GI71984413, Length=490, Percent_Identity=35.7142857142857, Blast_Score=238, Evalue=6e-63, Organism=Caenorhabditis elegans, GI71984406, Length=490, Percent_Identity=35.7142857142857, Blast_Score=238, Evalue=6e-63, Organism=Saccharomyces cerevisiae, GI6319279, Length=434, Percent_Identity=36.1751152073733, Blast_Score=259, Evalue=6e-70, Organism=Saccharomyces cerevisiae, GI6324923, Length=490, Percent_Identity=34.2857142857143, Blast_Score=241, Evalue=1e-64, Organism=Drosophila melanogaster, GI24648964, Length=488, Percent_Identity=36.0655737704918, Blast_Score=249, Evalue=4e-66, Organism=Drosophila melanogaster, GI28571814, Length=488, Percent_Identity=36.0655737704918, Blast_Score=248, Evalue=7e-66, Organism=Drosophila melanogaster, GI24648966, Length=406, Percent_Identity=35.2216748768473, Blast_Score=229, Evalue=4e-60, Organism=Drosophila melanogaster, GI24581235, Length=430, Percent_Identity=30.4651162790698, Blast_Score=196, Evalue=4e-50, Organism=Drosophila melanogaster, GI24646914, Length=283, Percent_Identity=37.1024734982332, Blast_Score=152, Evalue=4e-37,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001697 - InterPro: IPR015813 - InterPro: IPR011037 - InterPro: IPR015794 - InterPro: IPR018209 - InterPro: IPR015793 - InterPro: IPR015795 - InterPro: IPR015806 [H]
Pfam domain/function: PF00224 PK; PF02887 PK_C [H]
EC number: =2.7.1.40 [H]
Molecular weight: Translated: 52327; Mature: 52327
Theoretical pI: Translated: 5.16; Mature: 5.16
Prosite motif: PS00110 PYRUVATE_KINASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKERQRRTKILATLGPATDAPGVLDTLFKAGVNVVRLNFSHGDPSGQAKRAAEVRAAAAR CCCHHHHHHHHHEECCCCCCCHHHHHHHHCCCEEEEEEECCCCCCCHHHHHHHHHHHHHH VGAEVGILADLPGPKIRIERFAEGKIKLTMGDRFDLVADANAPAGDQTQVGVSYLGLPQD HCCCEEEEECCCCCCEEEEEECCCEEEEEECCCEEEEECCCCCCCCCCCCCHHEECCCCC VTAGDVLLLDDGLMQLQVTDVQGERIVTKVLNDGVLSDRKGLNKQGGGLSLGALTERDKE CCCCCEEEEECCEEEEEEECCCCHHHHHHHHCCCCCCCCCCCCCCCCCEEECCCCHHHHH LIGIVAKIGVDFIAVSFCRNAQDMHDARQIAQQHGCDAQLVSKIERTEAIENLVEIVEAS HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCC DVVMVARGDLGVEIGDAELPGLQKKIIRESLAQNKVVITATQMLQSMVESPIPTRAEVLD CEEEEEECCCCEEECCCCCCCHHHHHHHHHHHCCCEEEEHHHHHHHHHHCCCCCHHHHHH VANAVIDGTDAVMLSAETAAGAYPVRAVEAMARICLGAEHQFEFDTDFEAAQRNLQRADQ HHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHH AIAMATMFLSEHIGLGGVVALTESGGTPRFLSRFRSNMPIYAFTRHDGARRQMAMMRGVF HHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHCCCCEEEEECCCCHHHHHHHHHCCC PISFDSRGLTPREAARAAIRLLVENERMGPGDRVVFTSGEHMETHGATNTLRLLEVGEDG CEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCEECCCCCCEEEEEEECCCC RATGLGEL CCCCCCCC >Mature Secondary Structure MKERQRRTKILATLGPATDAPGVLDTLFKAGVNVVRLNFSHGDPSGQAKRAAEVRAAAAR CCCHHHHHHHHHEECCCCCCCHHHHHHHHCCCEEEEEEECCCCCCCHHHHHHHHHHHHHH VGAEVGILADLPGPKIRIERFAEGKIKLTMGDRFDLVADANAPAGDQTQVGVSYLGLPQD HCCCEEEEECCCCCCEEEEEECCCEEEEEECCCEEEEECCCCCCCCCCCCCHHEECCCCC VTAGDVLLLDDGLMQLQVTDVQGERIVTKVLNDGVLSDRKGLNKQGGGLSLGALTERDKE CCCCCEEEEECCEEEEEEECCCCHHHHHHHHCCCCCCCCCCCCCCCCCEEECCCCHHHHH LIGIVAKIGVDFIAVSFCRNAQDMHDARQIAQQHGCDAQLVSKIERTEAIENLVEIVEAS HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCC DVVMVARGDLGVEIGDAELPGLQKKIIRESLAQNKVVITATQMLQSMVESPIPTRAEVLD CEEEEEECCCCEEECCCCCCCHHHHHHHHHHHCCCEEEEHHHHHHHHHHCCCCCHHHHHH VANAVIDGTDAVMLSAETAAGAYPVRAVEAMARICLGAEHQFEFDTDFEAAQRNLQRADQ HHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHH AIAMATMFLSEHIGLGGVVALTESGGTPRFLSRFRSNMPIYAFTRHDGARRQMAMMRGVF HHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHCCCCEEEEECCCCHHHHHHHHHCCC PISFDSRGLTPREAARAAIRLLVENERMGPGDRVVFTSGEHMETHGATNTLRLLEVGEDG CEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCEECCCCCCEEEEEEECCCC RATGLGEL CCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9097040; 9278503; 1732206; 1859631; 8439398 [H]