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The map label for this gene is 78048985

Identifier: 78048985

GI number: 78048985

Start: 3915783

End: 3916427

Strand: Reverse

Name: 78048985

Synonym: XCV3429

Alternate gene names: NA

Gene position: 3916427-3915783 (Counterclockwise)

Preceding gene: 78048986

Following gene: 78048984

Centisome position: 75.63

GC content: 64.19

Gene sequence:

>645_bases
GTGCCATGCACGGTGCCTCGCACTGACGCCCCGTCTGGTACGTCAGCCAATACCGCATTGCCGTGCCGGCAATGCCAGTC
GAAACGGTCGTGGATTTGTCATCCCTGGGAGGGGACCATGAACAAGCTGCATTCGAACACCCGCCATACCCCGTTGGCCG
CCGCGCTCGCGGCTGCGCTCACCCTGCTTGCCGGCGGCGCAAGCGCGCAAGACACCGCCACCGCTCCAGGCGTCACCGAA
CTGGACAAGGTGATGGTCAAGGGCGTGCGCGGCGCGCAGGCCGAAGCCATCGAGAACAAGCGCAGCGCGGCGCAGATCAT
CGATTCGATCTCTGCCGAAGATATCGGCAAATTGCCCGACGTCACCATCACCGATTCGTTGCAGCGCGTGCCTGGCGTGC
AGATCCGGCGCTCGGCCGGCGAAGGTTCGCAGCTCAATATCCGCGGCATGCCGCAGGTGCAGACCACCATGAACGGCGAG
TTGTACCTGAGTGCAGGCGGCGGCGATCAATATGGCCAGCCGAACATCGGCCGCGCGCAGCCGGATTTCGTGGACATTCC
TCCCACGCTGTTCAGTGGCGTGGATGTGATCAAATCGCCCACTGCGCCGATCTGGATGGCGGCATCAGCGGCACCGTCTC
GTTGA

Upstream 100 bases:

>100_bases
CCTTGCGCAACGCCACGCTGCAACTGCGTGGCTGGAATGCGGAACCATCGACAGGTGTCGCCAACGGGGTTCCGTAGCGA
CGTCTGCGTGTTGCCGCGCC

Downstream 100 bases:

>100_bases
AGACGCGGCGCCCATTCGATCTGCCGGAAGGCTGGACCTTCAGCGGCCAGGCCGAAGGCTCGTACGGCGATCGGGTGCAG
AAGGCCAACGCGTTGTATTC

Product: TonB-dependent outer membrane receptor (N-terminal fragment)

Products: NA

Alternate protein names: Nb-Dependent Receptor; NB-Dependent Outer Membrane Receptor; Nb-Dependent Outer Membrane Receptor Protein; NB-Dependent Receptor Plug; NB-Dependent Receptor Subfamily; NB-Dependent Receptor Subfamily Protein; NB Dependent Receptor-Related Protein; NB-Dependent Receptor Protein; Nucleoside Diphosphate Kinase; Crossover Junction Endodeoxyribonuclease RuvC; NB-Dependent Outer Membrane Receptor Protein; NB-Dependent Maltose Outer Membrane Transporter MalA; NB-Dependent Receptor-Like Protein; NB Dependent Receptor For Iron Chelates; Outer Membrane Insertion C-Terminal Signal; Outer Membrane Receptor Proteins Mostly Fe Transport-Like; 50S Ribosomal Protein L; NB-Dependent Outer Membrane Ferripyoverdine Receptor; NB-Dependent Receptor Plug Domain; DEAD/DEAH Box Helicase-Like; Ferrienterochelin/Colicin Outer Membrane Receptor; Peptidase; NB Dependent Receptor Protein; 1-(5-Phosphoribosyl)-5-; Rhodanese-Like Protein; Argininosuccinate Synthase

Number of amino acids: Translated: 214; Mature: 213

Protein sequence:

>214_residues
MPCTVPRTDAPSGTSANTALPCRQCQSKRSWICHPWEGTMNKLHSNTRHTPLAAALAAALTLLAGGASAQDTATAPGVTE
LDKVMVKGVRGAQAEAIENKRSAAQIIDSISAEDIGKLPDVTITDSLQRVPGVQIRRSAGEGSQLNIRGMPQVQTTMNGE
LYLSAGGGDQYGQPNIGRAQPDFVDIPPTLFSGVDVIKSPTAPIWMAASAAPSR

Sequences:

>Translated_214_residues
MPCTVPRTDAPSGTSANTALPCRQCQSKRSWICHPWEGTMNKLHSNTRHTPLAAALAAALTLLAGGASAQDTATAPGVTE
LDKVMVKGVRGAQAEAIENKRSAAQIIDSISAEDIGKLPDVTITDSLQRVPGVQIRRSAGEGSQLNIRGMPQVQTTMNGE
LYLSAGGGDQYGQPNIGRAQPDFVDIPPTLFSGVDVIKSPTAPIWMAASAAPSR
>Mature_213_residues
PCTVPRTDAPSGTSANTALPCRQCQSKRSWICHPWEGTMNKLHSNTRHTPLAAALAAALTLLAGGASAQDTATAPGVTEL
DKVMVKGVRGAQAEAIENKRSAAQIIDSISAEDIGKLPDVTITDSLQRVPGVQIRRSAGEGSQLNIRGMPQVQTTMNGEL
YLSAGGGDQYGQPNIGRAQPDFVDIPPTLFSGVDVIKSPTAPIWMAASAAPSR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22384; Mature: 22252

Theoretical pI: Translated: 7.96; Mature: 7.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPCTVPRTDAPSGTSANTALPCRQCQSKRSWICHPWEGTMNKLHSNTRHTPLAAALAAAL
CCCCCCCCCCCCCCCCCCCCCHHHHHCCCCEEEECCHHHHHHHHCCCCCCHHHHHHHHHH
TLLAGGASAQDTATAPGVTELDKVMVKGVRGAQAEAIENKRSAAQIIDSISAEDIGKLPD
HHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCHHHHCCCCC
VTITDSLQRVPGVQIRRSAGEGSQLNIRGMPQVQTTMNGELYLSAGGGDQYGQPNIGRAQ
CEEHHHHHHCCCCEEEECCCCCCEEEECCCCCCCEECCCEEEEEECCCCCCCCCCCCCCC
PDFVDIPPTLFSGVDVIKSPTAPIWMAASAAPSR
CCCEECCHHHHHCCHHHCCCCCCEEEECCCCCCC
>Mature Secondary Structure 
PCTVPRTDAPSGTSANTALPCRQCQSKRSWICHPWEGTMNKLHSNTRHTPLAAALAAAL
CCCCCCCCCCCCCCCCCCCCHHHHHCCCCEEEECCHHHHHHHHCCCCCCHHHHHHHHHH
TLLAGGASAQDTATAPGVTELDKVMVKGVRGAQAEAIENKRSAAQIIDSISAEDIGKLPD
HHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCHHHHCCCCC
VTITDSLQRVPGVQIRRSAGEGSQLNIRGMPQVQTTMNGELYLSAGGGDQYGQPNIGRAQ
CEEHHHHHHCCCCEEEECCCCCCEEEECCCCCCCEECCCEEEEEECCCCCCCCCCCCCCC
PDFVDIPPTLFSGVDVIKSPTAPIWMAASAAPSR
CCCEECCHHHHHCCHHHCCCCCCEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA