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The map label for this gene is 78048961

Identifier: 78048961

GI number: 78048961

Start: 3892452

End: 3893045

Strand: Reverse

Name: 78048961

Synonym: XCV3405

Alternate gene names: NA

Gene position: 3893045-3892452 (Counterclockwise)

Preceding gene: 78048964

Following gene: 78048960

Centisome position: 75.18

GC content: 60.27

Gene sequence:

>594_bases
ATGTCCGTAATTTGTCGCCGACGAGACAGTACTCAAGGTTTTTTGTTAGCCGCTCTTGATCAGCCAAGCCTCGACGGCAA
TGCCGAGCATGATTTTTCAGTGCCTCCATCAAGCAGCTGTTGGCCTGACCGAGGGCTAGCACCTCGCCGCGTCGTTGACC
AGGTGGACTGCAGCACTTGGTCAACGACGGCCGTTGGCCCCGTGGACAAGCCGGGGGCGTCGCCCCGCAACGCACGGGCA
TGGCGACGGGTCGAAGAGTTCTTAGAGTGGCGCATCCAGTTCAATCAACTCGACGCAGCGGTGCCAGCGTTGCGGGCATC
AAGTCCTGATCGCCGACACTTTTGGCGAGCCTTTACAGCCATGGCCGCCGCCATTGAGAGCAAGGCAGCGATGAGCGAGG
ACGCGCAGCTCTTCGGCCGTCGGGCCGAGGAAATTTGTCCTGGCACGCGCTGGAAAACACGGACGATCACGTCTGAGTTC
ATGGTTGTTGCCAGGGCTCATCCATCCCGATGGCTGCGTGCTTCTCGTGCCCAGCGATGCAGGCATCAGGCAAGCAAGCG
CACGTCAGCGAGAGCGCCATCATTGAGGCTATGA

Upstream 100 bases:

>100_bases
TTTTGAGCGGTGCATCAGTTTAAAATCCAATTCCTTGTCAGTTTCAACACCTGAGGCAATCTCCATCAGGAGCGCAATTG
GGACTTCGTCGCAACGTGTC

Downstream 100 bases:

>100_bases
AGCTCAGCCATCGCTTGTTGATGTTCATCGGTCCCGTACATCCGAATGCCATTTCGCCAGAAAGCCTTGTGGGGCATGCA
TGGTGTTTTCTCCACCAGCG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 197; Mature: 196

Protein sequence:

>197_residues
MSVICRRRDSTQGFLLAALDQPSLDGNAEHDFSVPPSSSCWPDRGLAPRRVVDQVDCSTWSTTAVGPVDKPGASPRNARA
WRRVEEFLEWRIQFNQLDAAVPALRASSPDRRHFWRAFTAMAAAIESKAAMSEDAQLFGRRAEEICPGTRWKTRTITSEF
MVVARAHPSRWLRASRAQRCRHQASKRTSARAPSLRL

Sequences:

>Translated_197_residues
MSVICRRRDSTQGFLLAALDQPSLDGNAEHDFSVPPSSSCWPDRGLAPRRVVDQVDCSTWSTTAVGPVDKPGASPRNARA
WRRVEEFLEWRIQFNQLDAAVPALRASSPDRRHFWRAFTAMAAAIESKAAMSEDAQLFGRRAEEICPGTRWKTRTITSEF
MVVARAHPSRWLRASRAQRCRHQASKRTSARAPSLRL
>Mature_196_residues
SVICRRRDSTQGFLLAALDQPSLDGNAEHDFSVPPSSSCWPDRGLAPRRVVDQVDCSTWSTTAVGPVDKPGASPRNARAW
RRVEEFLEWRIQFNQLDAAVPALRASSPDRRHFWRAFTAMAAAIESKAAMSEDAQLFGRRAEEICPGTRWKTRTITSEFM
VVARAHPSRWLRASRAQRCRHQASKRTSARAPSLRL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22188; Mature: 22057

Theoretical pI: Translated: 11.52; Mature: 11.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVICRRRDSTQGFLLAALDQPSLDGNAEHDFSVPPSSSCWPDRGLAPRRVVDQVDCSTW
CCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCC
STTAVGPVDKPGASPRNARAWRRVEEFLEWRIQFNQLDAAVPALRASSPDRRHFWRAFTA
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
MAAAIESKAAMSEDAQLFGRRAEEICPGTRWKTRTITSEFMVVARAHPSRWLRASRAQRC
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHH
RHQASKRTSARAPSLRL
HHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
SVICRRRDSTQGFLLAALDQPSLDGNAEHDFSVPPSSSCWPDRGLAPRRVVDQVDCSTW
CCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCC
STTAVGPVDKPGASPRNARAWRRVEEFLEWRIQFNQLDAAVPALRASSPDRRHFWRAFTA
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
MAAAIESKAAMSEDAQLFGRRAEEICPGTRWKTRTITSEFMVVARAHPSRWLRASRAQRC
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHH
RHQASKRTSARAPSLRL
HHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA