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The map label for this gene is 78048948

Identifier: 78048948

GI number: 78048948

Start: 3878569

End: 3880185

Strand: Reverse

Name: 78048948

Synonym: XCV3392

Alternate gene names: NA

Gene position: 3880185-3878569 (Counterclockwise)

Preceding gene: 78048951

Following gene: 78048947

Centisome position: 74.93

GC content: 57.7

Gene sequence:

>1617_bases
TTGGTCACCCACACCGTTACGGCTCCCGCTCAGGTATGCTCTGGCGTCGTCAAAACTCAAGGTATTCCCATGGAAGGGCT
GAAAAGTGTGACGCAGGGCCTGTTAACCGCTACGGCCTACTGCTTGGCGTTTCAACTGTCTTGGCACTGCTCACTGGATC
AGTGGTACCTGCCAGCTGGCCTTCGGATCGCAGCGTTGCTGCTCGCCCCTTCTCGCTTGCTACCTTGGATACTGATGGGC
GATGTCGCGGCGTTGCTCATGATTCGGGTTCCCGCGATCAGCAGTGTCGGTGTCAATCCTACCTGGGCCTACGCAAGCCC
CTGGATCCTGGTCCCGGCCATTGCTCTGGTCCCTATTGCTATTCGGGCAAGGTATGGGGCAGTACATCGCGCAGGAGCGT
CACTGATCCCGATGCTTCTGGTCACGGCAGTCTGGGGCGCGCTCTGCACTCTGGGGACCAACATCATGCTCGATGGACCT
TCGTCGGCAATCAGCGGCGTCAAGTTCGCCCGTTTCGCTGTAGGTGACTACCTCGGAATGTTGATGGTGGTCCTGCCGGT
GCTTCTATGGATGCGCCGCCACGACGAAGAGACGCCCAGCCGCCTGACGCCTCATTGCGCACTGGCGGTTCTGGCGACTG
CATTGATCTTTGCATTAGCAACACTGCCGCAAAGCAATGTTGCACGGTTGGGCTTAATGTCGTTGCTGATCGTTCCTGCC
GTTCTACTCACCTGGCTGCATGGCTGGCGGGGCGCGGCCATCGGCGTTGTGCTGGCGAATACCGCTCTGGCATTTTCACT
GCGAAATACGGGTGTGCTGGGGGCCTATGACTCAATAGGCTTTGTTGTGCAGGTGATGCTCGCAACAACGGCTACGGGAC
TATTCGTGCTGGGCGCGCGTATCTCCAGCACCCTTGCCGAAGTGCGCCTGCGTCTGCGAGGCGAGCAACAGGCATTGGAT
ACGGCAAAACTGAGCTACCTATGGGCTGAGCGGGAATTGCGCGAGCACGTGATCGAGTACGTCGACATCGAGGTACAGAT
GAACCGACTACGCCGCGACATCGAAAGTCATCTCAAGTCACGCGGACAACATGAAGCCGCCATGCGGATGATTCGTACGG
GCTCTATCCAATCGAAGATGCTGCACGAGTACATCAATGCTTTGTACCCGCTGGAGATCGAGACGCATGGGCTCTATCAC
GTTTTCCGTTCGCCAGGCTTCGCCAGTTCCAGTCACACAGAAATTCACCCAGTCATGCTTCGCGGCAATCCCATGCAATT
GTCTGTTGGGCTGCAGCTTGCCGTCTACAGATGCACCCAGCAGGCGATTGCCTGTCTGCCTCCAGCAAGGCGTCATACCA
TCAAGGCCAGGGTCGGAAAACTGCGCGGGCTCCAGGGCATTGCTGTATCTATTTACGGGGATAAGCCAGAGAGCAAGCCT
GCCAGTCGGACCGCTCTTGAGAACACAGCAGAGTTGTCCAGCAGGGTGCGCTCGTATGGTGGCACCTGCCGGCGCCACCA
TACGGGCAAGATCAGCTTCTTTGTTTCCGAACCAACAGGGACACGATCAATTTTTAGGTACGATGAGCCAGCTGTTACCA
CGCGGGAGTGTCTGTAG

Upstream 100 bases:

>100_bases
GGGGGCAAGGACGTCCATGTTTTTGCAGCAGGCTCTCTACATACCTGACGCGCATCTGTGGCGTACCCGTTTCACTGGGC
TGTAGGGGCATGTACCGGTC

Downstream 100 bases:

>100_bases
CAGCACCGTCATACCATCTCCTTCATATACGACTGTACCGCTCGGGCGTGAACCCGCCGCCAGGATCGTGGTGCGGTCTG
CATCGATACCAACCGGCATG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 538; Mature: 538

Protein sequence:

>538_residues
MVTHTVTAPAQVCSGVVKTQGIPMEGLKSVTQGLLTATAYCLAFQLSWHCSLDQWYLPAGLRIAALLLAPSRLLPWILMG
DVAALLMIRVPAISSVGVNPTWAYASPWILVPAIALVPIAIRARYGAVHRAGASLIPMLLVTAVWGALCTLGTNIMLDGP
SSAISGVKFARFAVGDYLGMLMVVLPVLLWMRRHDEETPSRLTPHCALAVLATALIFALATLPQSNVARLGLMSLLIVPA
VLLTWLHGWRGAAIGVVLANTALAFSLRNTGVLGAYDSIGFVVQVMLATTATGLFVLGARISSTLAEVRLRLRGEQQALD
TAKLSYLWAERELREHVIEYVDIEVQMNRLRRDIESHLKSRGQHEAAMRMIRTGSIQSKMLHEYINALYPLEIETHGLYH
VFRSPGFASSSHTEIHPVMLRGNPMQLSVGLQLAVYRCTQQAIACLPPARRHTIKARVGKLRGLQGIAVSIYGDKPESKP
ASRTALENTAELSSRVRSYGGTCRRHHTGKISFFVSEPTGTRSIFRYDEPAVTTRECL

Sequences:

>Translated_538_residues
MVTHTVTAPAQVCSGVVKTQGIPMEGLKSVTQGLLTATAYCLAFQLSWHCSLDQWYLPAGLRIAALLLAPSRLLPWILMG
DVAALLMIRVPAISSVGVNPTWAYASPWILVPAIALVPIAIRARYGAVHRAGASLIPMLLVTAVWGALCTLGTNIMLDGP
SSAISGVKFARFAVGDYLGMLMVVLPVLLWMRRHDEETPSRLTPHCALAVLATALIFALATLPQSNVARLGLMSLLIVPA
VLLTWLHGWRGAAIGVVLANTALAFSLRNTGVLGAYDSIGFVVQVMLATTATGLFVLGARISSTLAEVRLRLRGEQQALD
TAKLSYLWAERELREHVIEYVDIEVQMNRLRRDIESHLKSRGQHEAAMRMIRTGSIQSKMLHEYINALYPLEIETHGLYH
VFRSPGFASSSHTEIHPVMLRGNPMQLSVGLQLAVYRCTQQAIACLPPARRHTIKARVGKLRGLQGIAVSIYGDKPESKP
ASRTALENTAELSSRVRSYGGTCRRHHTGKISFFVSEPTGTRSIFRYDEPAVTTRECL
>Mature_538_residues
MVTHTVTAPAQVCSGVVKTQGIPMEGLKSVTQGLLTATAYCLAFQLSWHCSLDQWYLPAGLRIAALLLAPSRLLPWILMG
DVAALLMIRVPAISSVGVNPTWAYASPWILVPAIALVPIAIRARYGAVHRAGASLIPMLLVTAVWGALCTLGTNIMLDGP
SSAISGVKFARFAVGDYLGMLMVVLPVLLWMRRHDEETPSRLTPHCALAVLATALIFALATLPQSNVARLGLMSLLIVPA
VLLTWLHGWRGAAIGVVLANTALAFSLRNTGVLGAYDSIGFVVQVMLATTATGLFVLGARISSTLAEVRLRLRGEQQALD
TAKLSYLWAERELREHVIEYVDIEVQMNRLRRDIESHLKSRGQHEAAMRMIRTGSIQSKMLHEYINALYPLEIETHGLYH
VFRSPGFASSSHTEIHPVMLRGNPMQLSVGLQLAVYRCTQQAIACLPPARRHTIKARVGKLRGLQGIAVSIYGDKPESKP
ASRTALENTAELSSRVRSYGGTCRRHHTGKISFFVSEPTGTRSIFRYDEPAVTTRECL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 58703; Mature: 58703

Theoretical pI: Translated: 10.00; Mature: 10.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVTHTVTAPAQVCSGVVKTQGIPMEGLKSVTQGLLTATAYCLAFQLSWHCSLDQWYLPAG
CCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCEECCCH
LRIAALLLAPSRLLPWILMGDVAALLMIRVPAISSVGVNPTWAYASPWILVPAIALVPIA
HHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
IRARYGAVHRAGASLIPMLLVTAVWGALCTLGTNIMLDGPSSAISGVKFARFAVGDYLGM
HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHHHHHH
LMVVLPVLLWMRRHDEETPSRLTPHCALAVLATALIFALATLPQSNVARLGLMSLLIVPA
HHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
VLLTWLHGWRGAAIGVVLANTALAFSLRNTGVLGAYDSIGFVVQVMLATTATGLFVLGAR
HHHHHHHCCCCHHHHHHHHHHHHEEEECCCCCEECHHHHHHHHHHHHHHHHHHHHHHHHH
ISSTLAEVRLRLRGEQQALDTAKLSYLWAERELREHVIEYVDIEVQMNRLRRDIESHLKS
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RGQHEAAMRMIRTGSIQSKMLHEYINALYPLEIETHGLYHVFRSPGFASSSHTEIHPVML
CCCHHHHHHHHHCCCHHHHHHHHHHHHHCCEEEECCCHHHHHCCCCCCCCCCCCEEEEEE
RGNPMQLSVGLQLAVYRCTQQAIACLPPARRHTIKARVGKLRGLQGIAVSIYGDKPESKP
ECCCEEEEECHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCC
ASRTALENTAELSSRVRSYGGTCRRHHTGKISFFVSEPTGTRSIFRYDEPAVTTRECL
CHHHHHHHHHHHHHHHHHHCCCHHCCCCCEEEEEEECCCCCCCEEECCCCCCCHHHCC
>Mature Secondary Structure
MVTHTVTAPAQVCSGVVKTQGIPMEGLKSVTQGLLTATAYCLAFQLSWHCSLDQWYLPAG
CCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCEECCCH
LRIAALLLAPSRLLPWILMGDVAALLMIRVPAISSVGVNPTWAYASPWILVPAIALVPIA
HHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
IRARYGAVHRAGASLIPMLLVTAVWGALCTLGTNIMLDGPSSAISGVKFARFAVGDYLGM
HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHHHHHH
LMVVLPVLLWMRRHDEETPSRLTPHCALAVLATALIFALATLPQSNVARLGLMSLLIVPA
HHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
VLLTWLHGWRGAAIGVVLANTALAFSLRNTGVLGAYDSIGFVVQVMLATTATGLFVLGAR
HHHHHHHCCCCHHHHHHHHHHHHEEEECCCCCEECHHHHHHHHHHHHHHHHHHHHHHHHH
ISSTLAEVRLRLRGEQQALDTAKLSYLWAERELREHVIEYVDIEVQMNRLRRDIESHLKS
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RGQHEAAMRMIRTGSIQSKMLHEYINALYPLEIETHGLYHVFRSPGFASSSHTEIHPVML
CCCHHHHHHHHHCCCHHHHHHHHHHHHHCCEEEECCCHHHHHCCCCCCCCCCCCEEEEEE
RGNPMQLSVGLQLAVYRCTQQAIACLPPARRHTIKARVGKLRGLQGIAVSIYGDKPESKP
ECCCEEEEECHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCC
ASRTALENTAELSSRVRSYGGTCRRHHTGKISFFVSEPTGTRSIFRYDEPAVTTRECL
CHHHHHHHHHHHHHHHHHHCCCHHCCCCCEEEEEEECCCCCCCEEECCCCCCCHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA