Click here to switch to the map view.

The map label for this gene is 78048936

Identifier: 78048936

GI number: 78048936

Start: 3865935

End: 3866588

Strand: Reverse

Name: 78048936

Synonym: XCV3380

Alternate gene names: NA

Gene position: 3866588-3865935 (Counterclockwise)

Preceding gene: 78048937

Following gene: 78048934

Centisome position: 74.67

GC content: 60.24

Gene sequence:

>654_bases
ATGGACAGGCAAGACACCCCCGCAATGGCGGAAATGATGGCCACGTTGAATGCATCGAACACTTCGTTGCAAGAGACGGT
CAAAGTGCTGACGACGCTGGTGGTGGCATCCATGCAGCAGCGCGAACAACGGTTGCGCGAGGTGGTCGCCGAGCAACTTC
AGGTAGTCCAACACGCGGCCAGCAGCGCCGATGCCAAGGTCAATCGGGTCTTGGAAAACGCCCTGCCGAGGCTGACGCAG
CTGACCAATCAGGCGTTGACGCAGACGCTGGAGCCAGCCGCCAAGCGATTCAACAAAGAAATGGCCACTGCGGACGAGAC
ATTGCAGCAAGCCACTCGACGTTATGCGCAGGCCCAGCAGTCCTTGGAAACAAAGATCACGCGACGCATGGGCATTGCAT
CGGCCACGATGCTCGTGGCGGGCGTGTTGGGACTGGGGGCGGTGGTCTATTCGGTTGGCATCATCACCGAAAAGCGAACC
GAACTCGCGCAGCTTCGAGCATCCATCGATTACCTGGACCGCGTGTCTCGTGCTGACCTCGCCCCCTGTGGGGAAGGAAG
GCTCTGCGCCACGCTTGAGAAGAACGGGCCGCGTTACGGCAACCAGAGGCAATACAGAGCGATCAACTTACGCGCACCAT
CGGCTGCGCGGTGA

Upstream 100 bases:

>100_bases
GGACGGCGGTGGGGGTGGAGACGGGGGAGGAGGCGGTGGTGGTGGAGGGGGTGGCGGTTAGTCAAAATCGCTCCCTGACC
AGCCGAGCTCAGGAGACCTC

Downstream 100 bases:

>100_bases
TGCCTGCTTTCCTCGTTCGGTTAGTAGAGGCATCGAGATGTCTAGCGGCTGCTTCCGTCCTCTGCTTGCCAGCTTCATTC
GATGGGAACCCTTGGCGGTC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 217; Mature: 217

Protein sequence:

>217_residues
MDRQDTPAMAEMMATLNASNTSLQETVKVLTTLVVASMQQREQRLREVVAEQLQVVQHAASSADAKVNRVLENALPRLTQ
LTNQALTQTLEPAAKRFNKEMATADETLQQATRRYAQAQQSLETKITRRMGIASATMLVAGVLGLGAVVYSVGIITEKRT
ELAQLRASIDYLDRVSRADLAPCGEGRLCATLEKNGPRYGNQRQYRAINLRAPSAAR

Sequences:

>Translated_217_residues
MDRQDTPAMAEMMATLNASNTSLQETVKVLTTLVVASMQQREQRLREVVAEQLQVVQHAASSADAKVNRVLENALPRLTQ
LTNQALTQTLEPAAKRFNKEMATADETLQQATRRYAQAQQSLETKITRRMGIASATMLVAGVLGLGAVVYSVGIITEKRT
ELAQLRASIDYLDRVSRADLAPCGEGRLCATLEKNGPRYGNQRQYRAINLRAPSAAR
>Mature_217_residues
MDRQDTPAMAEMMATLNASNTSLQETVKVLTTLVVASMQQREQRLREVVAEQLQVVQHAASSADAKVNRVLENALPRLTQ
LTNQALTQTLEPAAKRFNKEMATADETLQQATRRYAQAQQSLETKITRRMGIASATMLVAGVLGLGAVVYSVGIITEKRT
ELAQLRASIDYLDRVSRADLAPCGEGRLCATLEKNGPRYGNQRQYRAINLRAPSAAR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23857; Mature: 23857

Theoretical pI: Translated: 10.16; Mature: 10.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDRQDTPAMAEMMATLNASNTSLQETVKVLTTLVVASMQQREQRLREVVAEQLQVVQHAA
CCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SSADAKVNRVLENALPRLTQLTNQALTQTLEPAAKRFNKEMATADETLQQATRRYAQAQQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SLETKITRRMGIASATMLVAGVLGLGAVVYSVGIITEKRTELAQLRASIDYLDRVSRADL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
APCGEGRLCATLEKNGPRYGNQRQYRAINLRAPSAAR
CCCCCCCEEEEECCCCCCCCCCCHHEEEEECCCCCCC
>Mature Secondary Structure
MDRQDTPAMAEMMATLNASNTSLQETVKVLTTLVVASMQQREQRLREVVAEQLQVVQHAA
CCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SSADAKVNRVLENALPRLTQLTNQALTQTLEPAAKRFNKEMATADETLQQATRRYAQAQQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SLETKITRRMGIASATMLVAGVLGLGAVVYSVGIITEKRTELAQLRASIDYLDRVSRADL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
APCGEGRLCATLEKNGPRYGNQRQYRAINLRAPSAAR
CCCCCCCEEEEECCCCCCCCCCCHHEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA