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The map label for this gene is 78048884

Identifier: 78048884

GI number: 78048884

Start: 3807155

End: 3807973

Strand: Reverse

Name: 78048884

Synonym: XCV3328

Alternate gene names: NA

Gene position: 3807973-3807155 (Counterclockwise)

Preceding gene: 78048885

Following gene: 78048881

Centisome position: 73.53

GC content: 66.54

Gene sequence:

>819_bases
ATGCAAAGCAAATCCTCGCGCTGGCCGTGGTTGTTGGCGGTCCCCTTGATCGCTGGCGCCGCGTGGTGGCTGTTCAGCGG
CCCGCCCGATCCGCAGGGCAACTTGCCTGCACCCATCAGCCGTACCGCCAGTGCCGTGGCCGCTGCGGTCAGCCCACAGC
CGACGCCGGCCAGTGGCGAGCCGCGTCATCCGGTGCCGGCAGCATCGGCCGACGCTGCCGATGCTGCGATTCCTGCGTTG
GCGCAAAGCGACGATGCCGCGTGGCAAGCGCTGCTGGCGTTGGTGCAGGACGATGACGCGCTGTCGATCGTATTGCGCAA
GCACCTGATCGAACGCGTGGTGGTGATGATCGACAACCTCACCCAACCCAGCATCAGCCGCCGTGCCTTGGTGCTGCAGC
CGGTGCCTGGCGAGTTGCAGGTGGCCGGCGCAGGCGATCATCCGGTGCTCGATCAGGCCAATGCGGCGCGCTATGCACCT
TACGTGGCCGCATTCACCAGCGTGGATGCGCAGGCCATGGCGCGTAGCTATGTGCGCTTCTATCCACTGTTTCAGCAGGC
GTACGCGGATCTGGGCGCGCCGGATCGTTACTTCAACGACCGCGTCATCGATGTGATCGACCACTTGCTACGCACGCCTG
AGCCGACGCAGCCGATCGGCGTGCAACGCGACGACCGTGGCCGCTACCGCTTCGTCGACCCATCGCTGGAATCGCTGTCG
GTGGGGCAGAAGGCACTGCTGCGCCTGGGGCCGACGCAAGCGGCTGCAGTCAAGGCGCAACTGCAGCGGATTCGCACGGC
CTTGCTGCAGGGGCGCTGA

Upstream 100 bases:

>100_bases
CCAGCGTCAAGCGGCTCAACGAGCGACACCGTAAATCGATGGAACCACCGCAGCATCCCACGGTCACACACTGGATGTTG
TCGATGTCAGGAGTTCCACG

Downstream 100 bases:

>100_bases
GGCCGCTGGCTTCCCACTACCGGAGAGCGAACGCCGCATGTCAGGCGACCTGCGGCCTTCGCACCTGGGTGGGTGCGTAC
GTACACGACGTAACGCTGCA

Product: putative secreted protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 272; Mature: 272

Protein sequence:

>272_residues
MQSKSSRWPWLLAVPLIAGAAWWLFSGPPDPQGNLPAPISRTASAVAAAVSPQPTPASGEPRHPVPAASADAADAAIPAL
AQSDDAAWQALLALVQDDDALSIVLRKHLIERVVVMIDNLTQPSISRRALVLQPVPGELQVAGAGDHPVLDQANAARYAP
YVAAFTSVDAQAMARSYVRFYPLFQQAYADLGAPDRYFNDRVIDVIDHLLRTPEPTQPIGVQRDDRGRYRFVDPSLESLS
VGQKALLRLGPTQAAAVKAQLQRIRTALLQGR

Sequences:

>Translated_272_residues
MQSKSSRWPWLLAVPLIAGAAWWLFSGPPDPQGNLPAPISRTASAVAAAVSPQPTPASGEPRHPVPAASADAADAAIPAL
AQSDDAAWQALLALVQDDDALSIVLRKHLIERVVVMIDNLTQPSISRRALVLQPVPGELQVAGAGDHPVLDQANAARYAP
YVAAFTSVDAQAMARSYVRFYPLFQQAYADLGAPDRYFNDRVIDVIDHLLRTPEPTQPIGVQRDDRGRYRFVDPSLESLS
VGQKALLRLGPTQAAAVKAQLQRIRTALLQGR
>Mature_272_residues
MQSKSSRWPWLLAVPLIAGAAWWLFSGPPDPQGNLPAPISRTASAVAAAVSPQPTPASGEPRHPVPAASADAADAAIPAL
AQSDDAAWQALLALVQDDDALSIVLRKHLIERVVVMIDNLTQPSISRRALVLQPVPGELQVAGAGDHPVLDQANAARYAP
YVAAFTSVDAQAMARSYVRFYPLFQQAYADLGAPDRYFNDRVIDVIDHLLRTPEPTQPIGVQRDDRGRYRFVDPSLESLS
VGQKALLRLGPTQAAAVKAQLQRIRTALLQGR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29296; Mature: 29296

Theoretical pI: Translated: 7.82; Mature: 7.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQSKSSRWPWLLAVPLIAGAAWWLFSGPPDPQGNLPAPISRTASAVAAAVSPQPTPASGE
CCCCCCCCCEEEHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCC
PRHPVPAASADAADAAIPALAQSDDAAWQALLALVQDDDALSIVLRKHLIERVVVMIDNL
CCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCC
TQPSISRRALVLQPVPGELQVAGAGDHPVLDQANAARYAPYVAAFTSVDAQAMARSYVRF
CCCCCCCCEEEEECCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
YPLFQQAYADLGAPDRYFNDRVIDVIDHLLRTPEPTQPIGVQRDDRGRYRFVDPSLESLS
HHHHHHHHHHCCCCCHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEECCCHHHHH
VGQKALLRLGPTQAAAVKAQLQRIRTALLQGR
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MQSKSSRWPWLLAVPLIAGAAWWLFSGPPDPQGNLPAPISRTASAVAAAVSPQPTPASGE
CCCCCCCCCEEEHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCC
PRHPVPAASADAADAAIPALAQSDDAAWQALLALVQDDDALSIVLRKHLIERVVVMIDNL
CCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCC
TQPSISRRALVLQPVPGELQVAGAGDHPVLDQANAARYAPYVAAFTSVDAQAMARSYVRF
CCCCCCCCEEEEECCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
YPLFQQAYADLGAPDRYFNDRVIDVIDHLLRTPEPTQPIGVQRDDRGRYRFVDPSLESLS
HHHHHHHHHHCCCCCHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEECCCHHHHH
VGQKALLRLGPTQAAAVKAQLQRIRTALLQGR
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA