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The map label for this gene is ybgC [C]

Identifier: 78048832

GI number: 78048832

Start: 3742486

End: 3742944

Strand: Reverse

Name: ybgC [C]

Synonym: XCV3276

Alternate gene names: 78048832

Gene position: 3742944-3742486 (Counterclockwise)

Preceding gene: 78048833

Following gene: 78048831

Centisome position: 72.28

GC content: 62.96

Gene sequence:

>459_bases
ATGACCATCGAATCCCCATTCTCCAATCCCCAATCCCTGCCGGTATTCAGTTGGCCGACACGCGTCTACTGGGAAGATAC
CGACGCCGGCGGGGTGGTCTACCACGCGCGCTACGTGGCCTTCATGGAACGCGCGCGCACGGAGTGGATGCGTGCGCTCG
GCTACGGGCAGGAGCGTATGCGCCAGGAGCACGACCTGGTGTTTGCGGTCCGCGCGATGCAACTGGATTTCCTCAAGCCG
GCCCGGCTCGACGACGCGCTGTCAGTGTCGGCGGTATTGCTGCGATGCAGACGGGCCAGCCTGCTGTTCGCGCAATCGGT
CCGTCGCGAAGGCGAAGTGCTGCTGACCGCCGAGGTGCGTATTGCCGCGCTCGGTACCAGCGACTTCCGTCCGCGTGGCA
TGGACGATGCGCTGTATGACGTGTTGAAAGCTCTAGAAACCCCAGAATCCGATTACTGA

Upstream 100 bases:

>100_bases
CCGCGCGAGCGCGCCCCGGGCATCGGCGAACCGGGAGACCTGTTTTGACGACGCTCTGCTGGTCGCCAACCTGGGCCGTC
ACGACCGAAATTCCGTGCCC

Downstream 100 bases:

>100_bases
GGAACGAACGGATGTCGATTGCATTGCTCCTGGCCCTGCAGGACACGGTAGTGGAAGCACTGCCGCAGGACGTCGCCGCT
GCCGCGGCGCAGACCGCCAG

Product: putative thioesterase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 152; Mature: 151

Protein sequence:

>152_residues
MTIESPFSNPQSLPVFSWPTRVYWEDTDAGGVVYHARYVAFMERARTEWMRALGYGQERMRQEHDLVFAVRAMQLDFLKP
ARLDDALSVSAVLLRCRRASLLFAQSVRREGEVLLTAEVRIAALGTSDFRPRGMDDALYDVLKALETPESDY

Sequences:

>Translated_152_residues
MTIESPFSNPQSLPVFSWPTRVYWEDTDAGGVVYHARYVAFMERARTEWMRALGYGQERMRQEHDLVFAVRAMQLDFLKP
ARLDDALSVSAVLLRCRRASLLFAQSVRREGEVLLTAEVRIAALGTSDFRPRGMDDALYDVLKALETPESDY
>Mature_151_residues
TIESPFSNPQSLPVFSWPTRVYWEDTDAGGVVYHARYVAFMERARTEWMRALGYGQERMRQEHDLVFAVRAMQLDFLKPA
RLDDALSVSAVLLRCRRASLLFAQSVRREGEVLLTAEVRIAALGTSDFRPRGMDDALYDVLKALETPESDY

Specific function: Unknown

COG id: COG0824

COG function: function code R; Predicted thioesterase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 4-hydroxybenzoyl-CoA thioesterase family [H]

Homologues:

Organism=Escherichia coli, GI1786957, Length=125, Percent_Identity=44, Blast_Score=106, Evalue=7e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006684
- InterPro:   IPR008272
- InterPro:   IPR006683
- InterPro:   IPR014166 [H]

Pfam domain/function: PF03061 4HBT [H]

EC number: NA

Molecular weight: Translated: 17408; Mature: 17277

Theoretical pI: Translated: 5.29; Mature: 5.29

Prosite motif: PS01328 4HBCOA_THIOESTERASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTIESPFSNPQSLPVFSWPTRVYWEDTDAGGVVYHARYVAFMERARTEWMRALGYGQERM
CCCCCCCCCCCCCCEEECCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
RQEHDLVFAVRAMQLDFLKPARLDDALSVSAVLLRCRRASLLFAQSVRREGEVLLTAEVR
HHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEE
IAALGTSDFRPRGMDDALYDVLKALETPESDY
EEEECCCCCCCCCCCHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
TIESPFSNPQSLPVFSWPTRVYWEDTDAGGVVYHARYVAFMERARTEWMRALGYGQERM
CCCCCCCCCCCCCEEECCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
RQEHDLVFAVRAMQLDFLKPARLDDALSVSAVLLRCRRASLLFAQSVRREGEVLLTAEVR
HHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEE
IAALGTSDFRPRGMDDALYDVLKALETPESDY
EEEECCCCCCCCCCCHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]