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The map label for this gene is tolR [H]

Identifier: 78048830

GI number: 78048830

Start: 3741088

End: 3741537

Strand: Reverse

Name: tolR [H]

Synonym: XCV3274

Alternate gene names: 78048830

Gene position: 3741537-3741088 (Counterclockwise)

Preceding gene: 78048831

Following gene: 78048829

Centisome position: 72.25

GC content: 62.67

Gene sequence:

>450_bases
ATGATCTCCGGTATTTCCCGTCGTAAGAAGCGCAAGCTCAAATCCGACATCAACGTCGTGCCGTATATCGACGTGATGCT
GGTGCTGCTGATCATCTTCATGGTCACCGCACCGTTGCTGACCCTGAGTACCGACGTCAGCCTGCCCAGTTCGCGCGCCA
AGGCGCTGGAAAGCAAGCAGGACCCGGTCGTGGTGGTGGTCGCTGCCGATGGCAAATTGGCGCTGCAGCTGCCCAAGGGC
AAGCCGCAGGCGATGGACGTGGCTGCGCTGCAGGCACAGCTGGCTGCCATCGTGGCGCAGGACAAGGACGCACGTGTGGT
GGTGGCCGGCGATCGCGCCGCGCCGTACCAGAAGATCATGGATGCCATCGACGTGCTCAAGCAGGCCAAGGTCGAGAAAG
TGGGCCTGATTTCCGACTCCGGCGGCACCGCAGGCAGCGATGCACGCTGA

Upstream 100 bases:

>100_bases
GTCGCGTCGGTGCGCAGTGCCACGTGCAGGTGTCCCTTTTCGGGGCACCGTGCAAGCGCACTGCCAGCCGGCGCCGAGGA
CTAATTAGGAACGTTTCGCG

Downstream 100 bases:

>100_bases
CGCACTCCCCACGCAGACGGCGCGCGATGACGGCTGGTTTCGACCGGTCGTCCTGGCATTGGTCGTGCACGTCCTGGTCG
CGCTGGTGTTTATCGCCGGC

Product: biopolymer transport TolR protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 149; Mature: 149

Protein sequence:

>149_residues
MISGISRRKKRKLKSDINVVPYIDVMLVLLIIFMVTAPLLTLSTDVSLPSSRAKALESKQDPVVVVVAADGKLALQLPKG
KPQAMDVAALQAQLAAIVAQDKDARVVVAGDRAAPYQKIMDAIDVLKQAKVEKVGLISDSGGTAGSDAR

Sequences:

>Translated_149_residues
MISGISRRKKRKLKSDINVVPYIDVMLVLLIIFMVTAPLLTLSTDVSLPSSRAKALESKQDPVVVVVAADGKLALQLPKG
KPQAMDVAALQAQLAAIVAQDKDARVVVAGDRAAPYQKIMDAIDVLKQAKVEKVGLISDSGGTAGSDAR
>Mature_149_residues
MISGISRRKKRKLKSDINVVPYIDVMLVLLIIFMVTAPLLTLSTDVSLPSSRAKALESKQDPVVVVVAADGKLALQLPKG
KPQAMDVAALQAQLAAIVAQDKDARVVVAGDRAAPYQKIMDAIDVLKQAKVEKVGLISDSGGTAGSDAR

Specific function: Involved in the tonB-independent uptake of proteins [H]

COG id: COG0848

COG function: function code U; Biopolymer transport protein

Gene ontology:

Cell location: Cell inner membrane; Single-pass type II membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the exbD/tolR family [H]

Homologues:

Organism=Escherichia coli, GI1789380, Length=130, Percent_Identity=37.6923076923077, Blast_Score=83, Evalue=8e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014168
- InterPro:   IPR003400 [H]

Pfam domain/function: PF02472 ExbD [H]

EC number: NA

Molecular weight: Translated: 15746; Mature: 15746

Theoretical pI: Translated: 10.35; Mature: 10.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MISGISRRKKRKLKSDINVVPYIDVMLVLLIIFMVTAPLLTLSTDVSLPSSRAKALESKQ
CCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCC
DPVVVVVAADGKLALQLPKGKPQAMDVAALQAQLAAIVAQDKDARVVVAGDRAAPYQKIM
CCEEEEEECCCEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHH
DAIDVLKQAKVEKVGLISDSGGTAGSDAR
HHHHHHHHHHHHHHEEEECCCCCCCCCCC
>Mature Secondary Structure
MISGISRRKKRKLKSDINVVPYIDVMLVLLIIFMVTAPLLTLSTDVSLPSSRAKALESKQ
CCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCC
DPVVVVVAADGKLALQLPKGKPQAMDVAALQAQLAAIVAQDKDARVVVAGDRAAPYQKIM
CCEEEEEECCCEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHH
DAIDVLKQAKVEKVGLISDSGGTAGSDAR
HHHHHHHHHHHHHHEEEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8955385; 10984043 [H]