| Definition | Xanthomonas campestris pv. vesicatoria str. 85-10 chromosome, complete genome. |
|---|---|
| Accession | NC_007508 |
| Length | 5,178,466 |
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The map label for this gene is 78048748
Identifier: 78048748
GI number: 78048748
Start: 3628409
End: 3629770
Strand: Reverse
Name: 78048748
Synonym: XCV3192
Alternate gene names: NA
Gene position: 3629770-3628409 (Counterclockwise)
Preceding gene: 78048750
Following gene: 78048747
Centisome position: 70.09
GC content: 64.1
Gene sequence:
>1362_bases ATGACCAGCCCCTCTGCGCCGCGATCTGCGGCTGGCCGTTTGAGCGCGGCACTGCGTAGCTCGCCACCATTGGCATGGTC GTTTCTTTACTTTTTCTGTCTGCTCAGCGGTTACTACGTGTTGCGCCCGGTGCGCGAAGCGATGGGCGCCTCGGCCGACG TAGAGGCGCTCTTTCCCACCGGCATGATCGCGTTCTTCGCCGCGCACGGTGTGCCCTTGAAGGACTTCACGCTGCAGGTG CTGTTTACCTGCACCTTCCTGATCATGGTGCTGCTGCAACCGGTCTACGGCGCTTTGGTCAGCCGCTATCCGCGGCGGGT GTTCCTGCCGGGGGTGTATGGCTTCTTCATCGCCACCCTGCTGCTGTTCTACGTGCTGTTCGACACCGGCGTGCCGGGCC GTGGCATGGCGTTCTTTTTGTGGGTGACCGTCTTCAACCTGTTTGCGGTGGCGGTGTTCTGGAGTTTCATGGCCGATGTC TTCAGCAATGCCCAAGCGCGCAGCTACTACGGCTATATCGGCGCGGCAGGCACGCTGGGTGCGTTTCTGGGCCCGGTCCT GACGCGCGTACTGGTCGAACGTATCGGCATCGCACATCTGATGTTGGTGTCGGCCGGGTTCCTGGCGGTATGCGTGCTCT GCGTGCTGCGCTTGCGGCTGTGGGCCGTTGCGCGCGAACAGGAGGGCCAGCTGAGCTCCGGCGAAGTGCCCATGGGCGGC GATGTGCTCGGCGGCCTCAAGCTGATCGTGCGTGAACCGCTGTTGCGCTGGCTGGCCTTCATGGTGTTGTTCGGCGTGGG CGTGGGGACCTTGCTCTACAACGAACAGGCGGCGCTGGTGCGGCGGCTTTACACCGATGCAGCGGCGGCCACCGCCTATT ACTCCAGCATCGACCTGGCGATCAATGCGCTCGCGCTGGTGCTGCAGCTGCTGGTGACGCGCGCGTTGCTGTCGCGCTTT GGTATCGCGCCGGCGTTGTTGATCCCGGGTGTGGCCATCATGCTGGGCTATGCGGCGTTGGCGGCGTCGCCGTTGCCACT AATGATTGCGATCGTGCAGGTGATTACCCGCTCCAGCGAATTCGCACTGGCCAAGCCCGCGCGCGAAACGCTGTACACAC GGGTAAATCGCGAGTGGCGCTACAAGGCCGGCGCCGCGATCGATACGGTGGTTTATCGCGGTGGCGATCTCACCTTCGTT TGGGTGCACAAGCTGGTCTCTGCGTTCGGCTCCAGCGCGGTGTTCGGCGTCGGCCTGGTCGTGGCGACCGGCATGACGGT CGGTGCGTTCGGCCTGTTGCGGCAAGCGCGCAAGCTACCCGCCGAGCGCGACGTGGAGACGGACAAGCGCGTTTCCGACT AA
Upstream 100 bases:
>100_bases GGCGCTGCCTCGCATCGGCTAACTTGCGCGCTTCTTTCACAGGTGCTGCCTTTGCCATGTTTTTTCTGTCGGGCCCGCCT GCGCGAGCGGCCGTTACCCC
Downstream 100 bases:
>100_bases GCACCGCGACAGCACATGCGCAGATGCAGCTTGGCGCTCGGCATCGACCAGGCAGGGGGCCTGCGTCTCACACTGGCAGC GCCAGAAGCGCAGGCGCCAG
Product: hypothetical protein
Products: NA
Alternate protein names: Inner Membrane Protein; ATP/ADP Translocase; Facilitator Superfamily Protein; Transmembrane Protein; MFS Family Protein; ADP/ATP Translocating Protein; ADP ATP Carrier Protein; ATP/ADP Translocase-Like Protein; Facilitator Family Protein
Number of amino acids: Translated: 453; Mature: 452
Protein sequence:
>453_residues MTSPSAPRSAAGRLSAALRSSPPLAWSFLYFFCLLSGYYVLRPVREAMGASADVEALFPTGMIAFFAAHGVPLKDFTLQV LFTCTFLIMVLLQPVYGALVSRYPRRVFLPGVYGFFIATLLLFYVLFDTGVPGRGMAFFLWVTVFNLFAVAVFWSFMADV FSNAQARSYYGYIGAAGTLGAFLGPVLTRVLVERIGIAHLMLVSAGFLAVCVLCVLRLRLWAVAREQEGQLSSGEVPMGG DVLGGLKLIVREPLLRWLAFMVLFGVGVGTLLYNEQAALVRRLYTDAAAATAYYSSIDLAINALALVLQLLVTRALLSRF GIAPALLIPGVAIMLGYAALAASPLPLMIAIVQVITRSSEFALAKPARETLYTRVNREWRYKAGAAIDTVVYRGGDLTFV WVHKLVSAFGSSAVFGVGLVVATGMTVGAFGLLRQARKLPAERDVETDKRVSD
Sequences:
>Translated_453_residues MTSPSAPRSAAGRLSAALRSSPPLAWSFLYFFCLLSGYYVLRPVREAMGASADVEALFPTGMIAFFAAHGVPLKDFTLQV LFTCTFLIMVLLQPVYGALVSRYPRRVFLPGVYGFFIATLLLFYVLFDTGVPGRGMAFFLWVTVFNLFAVAVFWSFMADV FSNAQARSYYGYIGAAGTLGAFLGPVLTRVLVERIGIAHLMLVSAGFLAVCVLCVLRLRLWAVAREQEGQLSSGEVPMGG DVLGGLKLIVREPLLRWLAFMVLFGVGVGTLLYNEQAALVRRLYTDAAAATAYYSSIDLAINALALVLQLLVTRALLSRF GIAPALLIPGVAIMLGYAALAASPLPLMIAIVQVITRSSEFALAKPARETLYTRVNREWRYKAGAAIDTVVYRGGDLTFV WVHKLVSAFGSSAVFGVGLVVATGMTVGAFGLLRQARKLPAERDVETDKRVSD >Mature_452_residues TSPSAPRSAAGRLSAALRSSPPLAWSFLYFFCLLSGYYVLRPVREAMGASADVEALFPTGMIAFFAAHGVPLKDFTLQVL FTCTFLIMVLLQPVYGALVSRYPRRVFLPGVYGFFIATLLLFYVLFDTGVPGRGMAFFLWVTVFNLFAVAVFWSFMADVF SNAQARSYYGYIGAAGTLGAFLGPVLTRVLVERIGIAHLMLVSAGFLAVCVLCVLRLRLWAVAREQEGQLSSGEVPMGGD VLGGLKLIVREPLLRWLAFMVLFGVGVGTLLYNEQAALVRRLYTDAAAATAYYSSIDLAINALALVLQLLVTRALLSRFG IAPALLIPGVAIMLGYAALAASPLPLMIAIVQVITRSSEFALAKPARETLYTRVNREWRYKAGAAIDTVVYRGGDLTFVW VHKLVSAFGSSAVFGVGLVVATGMTVGAFGLLRQARKLPAERDVETDKRVSD
Specific function: Unknown
COG id: COG3202
COG function: function code C; ATP/ADP translocase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 49083; Mature: 48952
Theoretical pI: Translated: 9.93; Mature: 9.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSPSAPRSAAGRLSAALRSSPPLAWSFLYFFCLLSGYYVLRPVREAMGASADVEALFPT CCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCHHHHHHHHHHCCCCCCCHHHHHH GMIAFFAAHGVPLKDFTLQVLFTCTFLIMVLLQPVYGALVSRYPRRVFLPGVYGFFIATL HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCHHHHHHHHH LLFYVLFDTGVPGRGMAFFLWVTVFNLFAVAVFWSFMADVFSNAQARSYYGYIGAAGTLG HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHH AFLGPVLTRVLVERIGIAHLMLVSAGFLAVCVLCVLRLRLWAVAREQEGQLSSGEVPMGG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC DVLGGLKLIVREPLLRWLAFMVLFGVGVGTLLYNEQAALVRRLYTDAAAATAYYSSIDLA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHH INALALVLQLLVTRALLSRFGIAPALLIPGVAIMLGYAALAASPLPLMIAIVQVITRSSE HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCC FALAKPARETLYTRVNREWRYKAGAAIDTVVYRGGDLTFVWVHKLVSAFGSSAVFGVGLV HHHHHHHHHHHHHHHCCHHHHHCCCHHHHHEEECCCCHHHHHHHHHHHHCCHHHHHHHHH VATGMTVGAFGLLRQARKLPAERDVETDKRVSD HHHCHHHHHHHHHHHHHHCCCCCCCCCCCCCCC >Mature Secondary Structure TSPSAPRSAAGRLSAALRSSPPLAWSFLYFFCLLSGYYVLRPVREAMGASADVEALFPT CCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCHHHHHHHHHHCCCCCCCHHHHHH GMIAFFAAHGVPLKDFTLQVLFTCTFLIMVLLQPVYGALVSRYPRRVFLPGVYGFFIATL HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCHHHHHHHHH LLFYVLFDTGVPGRGMAFFLWVTVFNLFAVAVFWSFMADVFSNAQARSYYGYIGAAGTLG HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHH AFLGPVLTRVLVERIGIAHLMLVSAGFLAVCVLCVLRLRLWAVAREQEGQLSSGEVPMGG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC DVLGGLKLIVREPLLRWLAFMVLFGVGVGTLLYNEQAALVRRLYTDAAAATAYYSSIDLA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHH INALALVLQLLVTRALLSRFGIAPALLIPGVAIMLGYAALAASPLPLMIAIVQVITRSSE HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCC FALAKPARETLYTRVNREWRYKAGAAIDTVVYRGGDLTFVWVHKLVSAFGSSAVFGVGLV HHHHHHHHHHHHHHHCCHHHHHCCCHHHHHEEECCCCHHHHHHHHHHHHCCHHHHHHHHH VATGMTVGAFGLLRQARKLPAERDVETDKRVSD HHHCHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA