Click here to switch to the map view.

The map label for this gene is 78048728

Identifier: 78048728

GI number: 78048728

Start: 3603797

End: 3604498

Strand: Reverse

Name: 78048728

Synonym: XCV3172

Alternate gene names: NA

Gene position: 3604498-3603797 (Counterclockwise)

Preceding gene: 78048731

Following gene: 78048724

Centisome position: 69.61

GC content: 67.52

Gene sequence:

>702_bases
GTGGTACGGCAGCTTCTGCCGCTTGTTCATCGGCAGGTCGCGCTTTTCGTCGAAGACGATGGCGTGCTGGCCCATCAAGG
TGATGCGCTTGCTGGTACGAATGCGCTCCAGCGTGGCGGGGATGATGTCCGGGTCGATCAGGTTGGGGCGGTGGCCCTCC
AGCCCGAGCAGCACCGCCTTGTCGGTGCCATGGCCGCGGCCGGTCAGGGCGAGCGAGCCGAAGACTTCGGCGCGGATGCG
CACCACGTCCTGCAGGCGCCCGGCATCGAGCAGCCAGCGATGCACGAAGCGCTCGGCGGCGCGCATCGGCCCCACGGTGT
GGGAGGAACTCGGGCCGATACCGATCTTGAACAGGTCGAACGTGCTGACAGCCATGCGTGCCGGAGAGGTGAGCGTAAAG
GCGGCTATTCTAGTCGTTCGGCGCTTGCGGCACGGCTGCAGCGCAGCATGAGAGCCCGGCCGATGCCCCTGACCCTGTAC
CAGCGCGACGATTGCCACCTGTGCGACCAGGCCTTGGAAGTGCTGGCGCAGGCGCGTGCAGGCGATTTCGACAGCGCGTT
CATCGACGACGACGCGGCGCTTGAGGTCGTTTACGGCGCGCGCGTGCCGGTGCTGCGCGATGCGCGTGGACGCGAGCTGG
ATTGGCCGTTCGATCGCGTGCGCTTGCGTGCATGGCTGGACGACGACGTCGCCGAGCGGTAG

Upstream 100 bases:

>100_bases
CATCCTGATTGACCACGAAGCCGCCGCCGACCGAATAGTAATCGCGTGTGGCGATGACGGCTTCATCGGCATCGTAGGCG
GTAAAGCGCATGCCGTTGGT

Downstream 100 bases:

>100_bases
GAGCGGCACGACAACGCGCCGGCTCCGCAATCTATTGCAGCCGGTGAGCACCGGCTCGCTGTTCCACGCCATGTGGGCAC
AAAAAAGCGGCGGACCCGAC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 233; Mature: 233

Protein sequence:

>233_residues
MVRQLLPLVHRQVALFVEDDGVLAHQGDALAGTNALQRGGDDVRVDQVGAVALQPEQHRLVGAMAAAGQGERAEDFGADA
HHVLQAPGIEQPAMHEALGGAHRPHGVGGTRADTDLEQVERADSHACRRGERKGGYSSRSALAARLQRSMRARPMPLTLY
QRDDCHLCDQALEVLAQARAGDFDSAFIDDDAALEVVYGARVPVLRDARGRELDWPFDRVRLRAWLDDDVAER

Sequences:

>Translated_233_residues
MVRQLLPLVHRQVALFVEDDGVLAHQGDALAGTNALQRGGDDVRVDQVGAVALQPEQHRLVGAMAAAGQGERAEDFGADA
HHVLQAPGIEQPAMHEALGGAHRPHGVGGTRADTDLEQVERADSHACRRGERKGGYSSRSALAARLQRSMRARPMPLTLY
QRDDCHLCDQALEVLAQARAGDFDSAFIDDDAALEVVYGARVPVLRDARGRELDWPFDRVRLRAWLDDDVAER
>Mature_233_residues
MVRQLLPLVHRQVALFVEDDGVLAHQGDALAGTNALQRGGDDVRVDQVGAVALQPEQHRLVGAMAAAGQGERAEDFGADA
HHVLQAPGIEQPAMHEALGGAHRPHGVGGTRADTDLEQVERADSHACRRGERKGGYSSRSALAARLQRSMRARPMPLTLY
QRDDCHLCDQALEVLAQARAGDFDSAFIDDDAALEVVYGARVPVLRDARGRELDWPFDRVRLRAWLDDDVAER

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25430; Mature: 25430

Theoretical pI: Translated: 5.55; Mature: 5.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVRQLLPLVHRQVALFVEDDGVLAHQGDALAGTNALQRGGDDVRVDQVGAVALQPEQHRL
CHHHHHHHHHHHEEEEECCCCEEEECCCCHHCCHHHHHCCCCEEHCCCCEEEECCHHHHH
VGAMAAAGQGERAEDFGADAHHVLQAPGIEQPAMHEALGGAHRPHGVGGTRADTDLEQVE
HHHHHHCCCCCCHHHCCCCHHHHHCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCHHHHHH
RADSHACRRGERKGGYSSRSALAARLQRSMRARPMPLTLYQRDDCHLCDQALEVLAQARA
HHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHC
GDFDSAFIDDDAALEVVYGARVPVLRDARGRELDWPFDRVRLRAWLDDDVAER
CCCCCHHCCCCCCEEEEECCCCCEEECCCCCCCCCCHHHHHHHHHCCHHHCCC
>Mature Secondary Structure
MVRQLLPLVHRQVALFVEDDGVLAHQGDALAGTNALQRGGDDVRVDQVGAVALQPEQHRL
CHHHHHHHHHHHEEEEECCCCEEEECCCCHHCCHHHHHCCCCEEHCCCCEEEECCHHHHH
VGAMAAAGQGERAEDFGADAHHVLQAPGIEQPAMHEALGGAHRPHGVGGTRADTDLEQVE
HHHHHHCCCCCCHHHCCCCHHHHHCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCHHHHHH
RADSHACRRGERKGGYSSRSALAARLQRSMRARPMPLTLYQRDDCHLCDQALEVLAQARA
HHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHC
GDFDSAFIDDDAALEVVYGARVPVLRDARGRELDWPFDRVRLRAWLDDDVAER
CCCCCHHCCCCCCEEEEECCCCCEEECCCCCCCCCCHHHHHHHHHCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA