Click here to switch to the map view.

The map label for this gene is 78048707

Identifier: 78048707

GI number: 78048707

Start: 3574868

End: 3575392

Strand: Reverse

Name: 78048707

Synonym: XCV3151

Alternate gene names: NA

Gene position: 3575392-3574868 (Counterclockwise)

Preceding gene: 78048708

Following gene: 78048705

Centisome position: 69.04

GC content: 64.95

Gene sequence:

>525_bases
GTGCGAAGTAGCGGTGCCGCTAATTGGAGCAGGCCGTCCTTTGCGGCACACCTGCAGACGGGTGTGGGGAGCCATGCCCA
GGGGGGCGGCGGCGACAACGCCACCGCGCCGGCTCCGCCGGTCGCGCATGACAGATGCGCCAGCGCCGCGCAAGGCCTCA
GGCGCATGCAAGGCGACGCATCTTTTCCACATCCCCTGTGGATGGAAGTTGCACAAGGCTGTGGACAAGTGCGCGCAGGC
CCCGGCCTGCAACGCTGTCAAGATGGGTGGCGAAAAAATGACCAGCGGTTCGAGGGGGACTTTTTTCGTGTGTGGGTCCA
TGCGATCCCGGCAGGATCGGCAAAGTGGTCGGCGCTGGTAACGCTGTGGTCTCGGGCCGGCATCGAGCGACCCTCTCGAT
GTGGTGAACCTGGAGATCACGTCGGTCTTTGCGACCCGCCAAGCCTTGGGGCTCATTCGCGTGCTGCCATCGACCGGCCA
CGTTGCCTCGGCAATGTGGTATGGCGTCACGTCGATGCCGCGTAG

Upstream 100 bases:

>100_bases
ACTGGGCATGCGCGACGACGCTGGCCCGATCACCCGCGACACCTCGCGCTTCGTGCCGCACGTCATCACCGATTGATGTG
TATCGGCGGGTGCATCGCCA

Downstream 100 bases:

>100_bases
TCGCCGCGGACGCCATCACACCCGCCGCGCCACAAGAAAACTCGCCACCGCCAGCAACCACGCCAACGCGAACACGCTCA
GGTAGGCGGCGCGCGTGGCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 174; Mature: 174

Protein sequence:

>174_residues
MRSSGAANWSRPSFAAHLQTGVGSHAQGGGGDNATAPAPPVAHDRCASAAQGLRRMQGDASFPHPLWMEVAQGCGQVRAG
PGLQRCQDGWRKNDQRFEGDFFRVWVHAIPAGSAKWSALVTLWSRAGIERPSRCGEPGDHVGLCDPPSLGAHSRAAIDRP
RCLGNVVWRHVDAA

Sequences:

>Translated_174_residues
MRSSGAANWSRPSFAAHLQTGVGSHAQGGGGDNATAPAPPVAHDRCASAAQGLRRMQGDASFPHPLWMEVAQGCGQVRAG
PGLQRCQDGWRKNDQRFEGDFFRVWVHAIPAGSAKWSALVTLWSRAGIERPSRCGEPGDHVGLCDPPSLGAHSRAAIDRP
RCLGNVVWRHVDAA
>Mature_174_residues
MRSSGAANWSRPSFAAHLQTGVGSHAQGGGGDNATAPAPPVAHDRCASAAQGLRRMQGDASFPHPLWMEVAQGCGQVRAG
PGLQRCQDGWRKNDQRFEGDFFRVWVHAIPAGSAKWSALVTLWSRAGIERPSRCGEPGDHVGLCDPPSLGAHSRAAIDRP
RCLGNVVWRHVDAA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18534; Mature: 18534

Theoretical pI: Translated: 8.91; Mature: 8.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.4 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
3.4 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRSSGAANWSRPSFAAHLQTGVGSHAQGGGGDNATAPAPPVAHDRCASAAQGLRRMQGDA
CCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCC
SFPHPLWMEVAQGCGQVRAGPGLQRCQDGWRKNDQRFEGDFFRVWVHAIPAGSAKWSALV
CCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCHHHHHHH
TLWSRAGIERPSRCGEPGDHVGLCDPPSLGAHSRAAIDRPRCLGNVVWRHVDAA
HHHHHHCCCCCHHCCCCCCCCCCCCCCCCCCCCHHHHCCHHHHHHHHHHHHCCC
>Mature Secondary Structure
MRSSGAANWSRPSFAAHLQTGVGSHAQGGGGDNATAPAPPVAHDRCASAAQGLRRMQGDA
CCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCC
SFPHPLWMEVAQGCGQVRAGPGLQRCQDGWRKNDQRFEGDFFRVWVHAIPAGSAKWSALV
CCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCHHHHHHH
TLWSRAGIERPSRCGEPGDHVGLCDPPSLGAHSRAAIDRPRCLGNVVWRHVDAA
HHHHHHCCCCCHHCCCCCCCCCCCCCCCCCCCCHHHHCCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA