Click here to switch to the map view.

The map label for this gene is ahyR [H]

Identifier: 78048691

GI number: 78048691

Start: 3554709

End: 3555473

Strand: Reverse

Name: ahyR [H]

Synonym: XCV3135

Alternate gene names: 78048691

Gene position: 3555473-3554709 (Counterclockwise)

Preceding gene: 78048694

Following gene: 78048690

Centisome position: 68.66

GC content: 64.18

Gene sequence:

>765_bases
ATGTTCGACATTCTGGCCAGCCTGGGCTGCGATCTGCAGGCATTGCAGACGCTCGATAGCTGCCTGGACCGGGTATTTCG
CGATGTCTGCGCGCTCGGTTTCCAGTCGCTGGTGTACGACTATGCGCCGGTGCCCCTGAGTCTGGAGGGAGCGCTGATCA
CGCCAACGGTGTTCATGCAGCGCAATGCGCCGGGCGATATGCAGCATGTGTGGTGCGAGCACGGCTACTACCAACATGAC
CCTGTTCAGCAGCGCGCAACGCGGCGTACCACGCCATTCGTATGGTCTTACCGCACCGACGGCCACTGCGCGGGCGTGGA
ATATGTGGGGGGCCAGCACCGGCAAGTGACCCGCTATCTCTGCGATAGCGGCATGGGCACCGGTGTCACCGTGCCGCTGC
ATTTGCCTGGTGGCGCATTTGCCACCTTCAGCGGCGCGATCGATGCCGCCGCTGCACAAGCGCCGCGGTTGGCCGAAGCG
CAGGTGCTGCCGTTCCTGTTGCTGGCGCACGCCTTCCAGGCGCGCGCGCAGGAGTTGCTGGAACCGCAGGAACGCCGCTG
CCACCACATCGCGCTGACCCGTCGCGAGCGCGAATGCCTGCAGTATTCGGCAAAAGGCCTGACGTCCAAACGGATTGCCG
CGGCACTCAACCGTTCAACCGCCACGGTGAACCTGCATCTGAATTCAGCCGCGCGCAAGCTGGGCGCCCGCAACCGCGTG
GAAGCGGTGGTGCGTGGTATGCACTATCGGTTGCTGGAGCCATAA

Upstream 100 bases:

>100_bases
GTGACGATAATGTGGCCGACAAGCCCATCCATTGGTAAAAGTGCTAGGTTTTCCATGCTGGATGTCATCTGCTGGCAACC
ACCGGTACCGAAGGAGCACC

Downstream 100 bases:

>100_bases
TTTTTTTTCGAGCGTGCCTGCGCGCTGCGGTACGCGCGGCTTCGCGGGTTTCGGAGCGGCAGAGCGCATATGCCATGTCG
TTTCCTTGGCGCGACCCACC

Product: LuxR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 254; Mature: 254

Protein sequence:

>254_residues
MFDILASLGCDLQALQTLDSCLDRVFRDVCALGFQSLVYDYAPVPLSLEGALITPTVFMQRNAPGDMQHVWCEHGYYQHD
PVQQRATRRTTPFVWSYRTDGHCAGVEYVGGQHRQVTRYLCDSGMGTGVTVPLHLPGGAFATFSGAIDAAAAQAPRLAEA
QVLPFLLLAHAFQARAQELLEPQERRCHHIALTRRERECLQYSAKGLTSKRIAAALNRSTATVNLHLNSAARKLGARNRV
EAVVRGMHYRLLEP

Sequences:

>Translated_254_residues
MFDILASLGCDLQALQTLDSCLDRVFRDVCALGFQSLVYDYAPVPLSLEGALITPTVFMQRNAPGDMQHVWCEHGYYQHD
PVQQRATRRTTPFVWSYRTDGHCAGVEYVGGQHRQVTRYLCDSGMGTGVTVPLHLPGGAFATFSGAIDAAAAQAPRLAEA
QVLPFLLLAHAFQARAQELLEPQERRCHHIALTRRERECLQYSAKGLTSKRIAAALNRSTATVNLHLNSAARKLGARNRV
EAVVRGMHYRLLEP
>Mature_254_residues
MFDILASLGCDLQALQTLDSCLDRVFRDVCALGFQSLVYDYAPVPLSLEGALITPTVFMQRNAPGDMQHVWCEHGYYQHD
PVQQRATRRTTPFVWSYRTDGHCAGVEYVGGQHRQVTRYLCDSGMGTGVTVPLHLPGGAFATFSGAIDAAAAQAPRLAEA
QVLPFLLLAHAFQARAQELLEPQERRCHHIALTRRERECLQYSAKGLTSKRIAAALNRSTATVNLHLNSAARKLGARNRV
EAVVRGMHYRLLEP

Specific function: Functions as a BHL-responsive transcriptional regulator [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH luxR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016032
- InterPro:   IPR005143
- InterPro:   IPR000792
- InterPro:   IPR011991 [H]

Pfam domain/function: PF03472 Autoind_bind; PF00196 GerE [H]

EC number: NA

Molecular weight: Translated: 28144; Mature: 28144

Theoretical pI: Translated: 8.40; Mature: 8.40

Prosite motif: PS00622 HTH_LUXR_1 ; PS50043 HTH_LUXR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.1 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
3.1 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFDILASLGCDLQALQTLDSCLDRVFRDVCALGFQSLVYDYAPVPLSLEGALITPTVFMQ
CCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCEECCEEEEE
RNAPGDMQHVWCEHGYYQHDPVQQRATRRTTPFVWSYRTDGHCAGVEYVGGQHRQVTRYL
CCCCCHHHHHHHHCCCCCCCHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHH
CDSGMGTGVTVPLHLPGGAFATFSGAIDAAAAQAPRLAEAQVLPFLLLAHAFQARAQELL
HHCCCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
EPQERRCHHIALTRRERECLQYSAKGLTSKRIAAALNRSTATVNLHLNSAARKLGARNRV
CHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCEEEEEEEECHHHHHHCCHHHH
EAVVRGMHYRLLEP
HHHHHHHHHHCCCC
>Mature Secondary Structure
MFDILASLGCDLQALQTLDSCLDRVFRDVCALGFQSLVYDYAPVPLSLEGALITPTVFMQ
CCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCEECCEEEEE
RNAPGDMQHVWCEHGYYQHDPVQQRATRRTTPFVWSYRTDGHCAGVEYVGGQHRQVTRYL
CCCCCHHHHHHHHCCCCCCCHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHH
CDSGMGTGVTVPLHLPGGAFATFSGAIDAAAAQAPRLAEAQVLPFLLLAHAFQARAQELL
HHCCCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
EPQERRCHHIALTRRERECLQYSAKGLTSKRIAAALNRSTATVNLHLNSAARKLGARNRV
CHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCEEEEEEEECHHHHHHCCHHHH
EAVVRGMHYRLLEP
HHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9286976 [H]