| Definition | Xanthomonas campestris pv. vesicatoria str. 85-10 chromosome, complete genome. |
|---|---|
| Accession | NC_007508 |
| Length | 5,178,466 |
Click here to switch to the map view.
The map label for this gene is pip [H]
Identifier: 78048690
GI number: 78048690
Start: 3553386
End: 3554471
Strand: Reverse
Name: pip [H]
Synonym: XCV3134
Alternate gene names: 78048690
Gene position: 3554471-3553386 (Counterclockwise)
Preceding gene: 78048691
Following gene: 78048688
Centisome position: 68.64
GC content: 66.39
Gene sequence:
>1086_bases ATGCGAGGCGTTCGATCGAACCGGCTATCGGCCAGCGCCAACCGCGCATCCGGGCGCGCCCAAACCTGTGAAATTTGCCA GTTAACGCCGCTCGGCGTGCTCGCTAGGCTCGGGGCTCATCATTGCCGTAGGCAGGCGCAGGTCATGCAGTGCACCGAGG GTTACGTCGAATTCCGCGGCTACCGTACCTGGTACCGCATTACCGGCGACCTGTGCGCAGATGCCTGCCCGCTGTTGGTG CTGCACGGCGGCCCCGGATGCACGCACGACTACGTGGACAGCTTCAAGGACCTGGCGGCCAACGGCCGCGCGGTGATCCA CTACGACCAGCTGGGCAACGGCAACTCCACCCATCTGCGCAATGCCGAGCCAGGCTTCTGGACAGTGGGGCTGTTTCTGG ACGAGCTGCAGACGCTGATCGCGCATCTGGGGCTGTCGCAGTACGCATTGCTGGGCCAGTCCTGGGGCGGAATGCTCGCC GCCGAGCACGCCGTGCGCCGGCCGGCCAGCCTGCGAGCGCTGGTCATCGCCAATTCGCCCGCCTCGATGGGGTTGTGGCG CGCGGCTGCGCTGCGTCTGCGCGCGCGCCTGCCTGACGATATCCAGGCCGCATTGGACGAGCACGAAGCCGCCGGTACGC TGGACCATCCGGCCTACCGCGCAGCCAGTCAGGTGTTCTATGCGCAGCACGTATGTCGCGTGCTGCCGTGGCCTGCCGAG GTCGCGCGGACGTTTGCCGCCATCGACGCCGACCCCACCGTGTATCACGCCATGAACGGCCCGACCGAATTCCACGTGGT GGGCAGCTTGCGCAACTGGAGCATCATCGAGCGCCTGCACCGCATCACCGCACCCACGCTGGTGCTCTCTGGCAAGTACG ACGAAGCCACGCCGGAAACCGTCGAGCCCTATGCGCGGTTGATCCCGGATGCGCGCTGGCACGTGTTCGCCAACTCCAGC CACATGCCGCACGTGGAAGAACGCGCGGCGTGCATGCGCCTGGTCGGCAATTTCCTGGACGATCAGACACCGTGGCCCGG TGGACAAATGCTGCGCTCCTCAGCACTGGCCAATCGCGCTGTTTGA
Upstream 100 bases:
>100_bases AGTCCAGTGGCGCTGACAGATGCGATAGATGTGCTGATTCGAACTAACTATTTCGATCCAGGAGCGATGTCGAGTCGCGC GATACCCAGCGCATTCGGCG
Downstream 100 bases:
>100_bases GCGTGCAGTGTGGTGTGGCGATAGCCAGCGGGCCGATCAACTGCACTGCGTTTAGCTGCCTGCTTGCCGCGATGATGTCG CTGTGGGTGGACACCATCAA
Product: prolyl aminopeptidase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 361; Mature: 361
Protein sequence:
>361_residues MRGVRSNRLSASANRASGRAQTCEICQLTPLGVLARLGAHHCRRQAQVMQCTEGYVEFRGYRTWYRITGDLCADACPLLV LHGGPGCTHDYVDSFKDLAANGRAVIHYDQLGNGNSTHLRNAEPGFWTVGLFLDELQTLIAHLGLSQYALLGQSWGGMLA AEHAVRRPASLRALVIANSPASMGLWRAAALRLRARLPDDIQAALDEHEAAGTLDHPAYRAASQVFYAQHVCRVLPWPAE VARTFAAIDADPTVYHAMNGPTEFHVVGSLRNWSIIERLHRITAPTLVLSGKYDEATPETVEPYARLIPDARWHVFANSS HMPHVEERAACMRLVGNFLDDQTPWPGGQMLRSSALANRAV
Sequences:
>Translated_361_residues MRGVRSNRLSASANRASGRAQTCEICQLTPLGVLARLGAHHCRRQAQVMQCTEGYVEFRGYRTWYRITGDLCADACPLLV LHGGPGCTHDYVDSFKDLAANGRAVIHYDQLGNGNSTHLRNAEPGFWTVGLFLDELQTLIAHLGLSQYALLGQSWGGMLA AEHAVRRPASLRALVIANSPASMGLWRAAALRLRARLPDDIQAALDEHEAAGTLDHPAYRAASQVFYAQHVCRVLPWPAE VARTFAAIDADPTVYHAMNGPTEFHVVGSLRNWSIIERLHRITAPTLVLSGKYDEATPETVEPYARLIPDARWHVFANSS HMPHVEERAACMRLVGNFLDDQTPWPGGQMLRSSALANRAV >Mature_361_residues MRGVRSNRLSASANRASGRAQTCEICQLTPLGVLARLGAHHCRRQAQVMQCTEGYVEFRGYRTWYRITGDLCADACPLLV LHGGPGCTHDYVDSFKDLAANGRAVIHYDQLGNGNSTHLRNAEPGFWTVGLFLDELQTLIAHLGLSQYALLGQSWGGMLA AEHAVRRPASLRALVIANSPASMGLWRAAALRLRARLPDDIQAALDEHEAAGTLDHPAYRAASQVFYAQHVCRVLPWPAE VARTFAAIDADPTVYHAMNGPTEFHVVGSLRNWSIIERLHRITAPTLVLSGKYDEATPETVEPYARLIPDARWHVFANSS HMPHVEERAACMRLVGNFLDDQTPWPGGQMLRSSALANRAV
Specific function: Hydrolyzes L-prolinamide, L-proline-p-nitroanilide, L- alaninamide, L-methioninamide, piperidine-2-carboxamide and piperazine-2-carboxamide. Has a much lower activity towards piperazine-2-tert-butylcarboxamide. Does not hydrolyze dipeptides and D-prolinam
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000073 - InterPro: IPR005945 - InterPro: IPR002410 [H]
Pfam domain/function: PF00561 Abhydrolase_1 [H]
EC number: =3.5.1.101 [H]
Molecular weight: Translated: 39729; Mature: 39729
Theoretical pI: Translated: 7.83; Mature: 7.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRGVRSNRLSASANRASGRAQTCEICQLTPLGVLARLGAHHCRRQAQVMQCTEGYVEFRG CCCCCCCCCCCCCCCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC YRTWYRITGDLCADACPLLVLHGGPGCTHDYVDSFKDLAANGRAVIHYDQLGNGNSTHLR CEEEEEEEHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCC NAEPGFWTVGLFLDELQTLIAHLGLSQYALLGQSWGGMLAAEHAVRRPASLRALVIANSP CCCCCEEEHHHHHHHHHHHHHHCCHHHHHHHHCCCCCHHHHHHHHCCCCCEEEEEEECCC ASMGLWRAAALRLRARLPDDIQAALDEHEAAGTLDHPAYRAASQVFYAQHVCRVLPWPAE CHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHH VARTFAAIDADPTVYHAMNGPTEFHVVGSLRNWSIIERLHRITAPTLVLSGKYDEATPET HHHHHHHCCCCCCEEEECCCCCEEEEEECCCCCHHHHHHHHHCCCEEEEECCCCCCCCHH VEPYARLIPDARWHVFANSSHMPHVEERAACMRLVGNFLDDQTPWPGGQMLRSSALANRA HHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCC V C >Mature Secondary Structure MRGVRSNRLSASANRASGRAQTCEICQLTPLGVLARLGAHHCRRQAQVMQCTEGYVEFRG CCCCCCCCCCCCCCCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC YRTWYRITGDLCADACPLLVLHGGPGCTHDYVDSFKDLAANGRAVIHYDQLGNGNSTHLR CEEEEEEEHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCC NAEPGFWTVGLFLDELQTLIAHLGLSQYALLGQSWGGMLAAEHAVRRPASLRALVIANSP CCCCCEEEHHHHHHHHHHHHHHCCHHHHHHHHCCCCCHHHHHHHHCCCCCEEEEEEECCC ASMGLWRAAALRLRARLPDDIQAALDEHEAAGTLDHPAYRAASQVFYAQHVCRVLPWPAE CHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHH VARTFAAIDADPTVYHAMNGPTEFHVVGSLRNWSIIERLHRITAPTLVLSGKYDEATPET HHHHHHHCCCCCCEEEECCCCCEEEEEECCCCCHHHHHHHHHCCCEEEEECCCCCCCCHH VEPYARLIPDARWHVFANSSHMPHVEERAACMRLVGNFLDDQTPWPGGQMLRSSALANRA HHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCC V C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA