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The map label for this gene is yagQ [H]

Identifier: 78048599

GI number: 78048599

Start: 3465018

End: 3466013

Strand: Reverse

Name: yagQ [H]

Synonym: XCV3043

Alternate gene names: 78048599

Gene position: 3466013-3465018 (Counterclockwise)

Preceding gene: 78048600

Following gene: 78048598

Centisome position: 66.93

GC content: 68.07

Gene sequence:

>996_bases
GTGGTTGCCCAGGTCGCGCATGCGCCGCCGGCGTGGCCGGCATGGCCGGGCTACGCGTTGCTCGACGATTTGTTGCCAAC
GTTGAGCGCATGGCAGCGTGCAGGGCAGCGCGTGGCGATGGCGACCTTGATCGATGTGCAAGGCTCCTCCCCACGGCCGT
TGGGGAGCGAGATGGCCATCAGCGCCGATGGGAGCGTGGCAGGCTATGTCTCAGGCGGCTGTGTCGAGGCGGCGGTGGCG
CATGAAGCCATGGCAGCGCTGCGCGATGGTCAGCCGCGCTGGCTGGATTATGGCGAAGGCAGCCAGGTGCTGGACATCCA
GCTCAGCTGCGGCGGGCGCATCGGCGTGCTGGTGTGGCCGGTGCCGGATCTGGGCGAGCACCTCGCACGTTGGCGTAACG
CGCGCCAGCATCGGCGTGCATTTCATGTGGCCTTGGATCGTGCGTCCGGCACGGTGCGTTACCTGGCAAATGCACAGGAC
GCGCGTGCAGGCGAATTCGTGCGCACTCATCGTCCGCCGTTACGGCTGGTGCTGGTCGGCGCCGACCCATCGCTGCTGGC
GCTGGTGTCGTTGGCCAGCCAGATGGGCATCGATGTGCGCGTGTTGCGGCCGCATGGTCCGGGCGAACCGCCGCCGGGCT
TGGCGCCCGAGCACTACGACCGACGTGCGTTGGGCGATGCGCTGCAGGACCTGCATCTGGATGCCGACACCGCGCTGTAT
AGCCTGGCCCACGATGCCGAGATCGACATGCAGGTTGCGCAGCGCGGCTTGGCGTCCCCTGTCGCCTGCATCGGCATCCT
CGGCAGCCGGCAGAAGCGCCAATGTCGCTTGCAGGCCTTGCGGGCGCTTGGGTATGGCGATGCCGCGCTCGCACGCCTGC
GTATGCCGGCGGGCTGGCGCATGGGGCGCTCGTCACCGCACACCATCGCGCTCGGCATCATCGCCGAAGCCACGCAAGCG
GTGGTAGATCTACAGGCGGTTACCGCAAGCCGATAA

Upstream 100 bases:

>100_bases
ATGCGGTGTACAACGCAACCGGCGTGCGTGTGCGCGACTATCCGGTGACCCTGGACAAATTGCTGCCGCACCTGCCCGAG
ATGCTGCGCGCGTGAGCGCG

Downstream 100 bases:

>100_bases
GTCGCTGGCTGCTCCTGCCGCGTGCGTGAGTCATCAAGGCGCATCGCAGCCGGTCGGGTCGAACACAGCTGCTTTCGAGC
ACTATCGTGGCAGGCCTCCG

Product: putative xanthine dehydrogenase accessory factor XdhC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 331; Mature: 331

Protein sequence:

>331_residues
MVAQVAHAPPAWPAWPGYALLDDLLPTLSAWQRAGQRVAMATLIDVQGSSPRPLGSEMAISADGSVAGYVSGGCVEAAVA
HEAMAALRDGQPRWLDYGEGSQVLDIQLSCGGRIGVLVWPVPDLGEHLARWRNARQHRRAFHVALDRASGTVRYLANAQD
ARAGEFVRTHRPPLRLVLVGADPSLLALVSLASQMGIDVRVLRPHGPGEPPPGLAPEHYDRRALGDALQDLHLDADTALY
SLAHDAEIDMQVAQRGLASPVACIGILGSRQKRQCRLQALRALGYGDAALARLRMPAGWRMGRSSPHTIALGIIAEATQA
VVDLQAVTASR

Sequences:

>Translated_331_residues
MVAQVAHAPPAWPAWPGYALLDDLLPTLSAWQRAGQRVAMATLIDVQGSSPRPLGSEMAISADGSVAGYVSGGCVEAAVA
HEAMAALRDGQPRWLDYGEGSQVLDIQLSCGGRIGVLVWPVPDLGEHLARWRNARQHRRAFHVALDRASGTVRYLANAQD
ARAGEFVRTHRPPLRLVLVGADPSLLALVSLASQMGIDVRVLRPHGPGEPPPGLAPEHYDRRALGDALQDLHLDADTALY
SLAHDAEIDMQVAQRGLASPVACIGILGSRQKRQCRLQALRALGYGDAALARLRMPAGWRMGRSSPHTIALGIIAEATQA
VVDLQAVTASR
>Mature_331_residues
MVAQVAHAPPAWPAWPGYALLDDLLPTLSAWQRAGQRVAMATLIDVQGSSPRPLGSEMAISADGSVAGYVSGGCVEAAVA
HEAMAALRDGQPRWLDYGEGSQVLDIQLSCGGRIGVLVWPVPDLGEHLARWRNARQHRRAFHVALDRASGTVRYLANAQD
ARAGEFVRTHRPPLRLVLVGADPSLLALVSLASQMGIDVRVLRPHGPGEPPPGLAPEHYDRRALGDALQDLHLDADTALY
SLAHDAEIDMQVAQRGLASPVACIGILGSRQKRQCRLQALRALGYGDAALARLRMPAGWRMGRSSPHTIALGIIAEATQA
VVDLQAVTASR

Specific function: Unknown

COG id: COG1975

COG function: function code O; Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1786477, Length=294, Percent_Identity=30.6122448979592, Blast_Score=97, Evalue=2e-21,
Organism=Escherichia coli, GI1789240, Length=286, Percent_Identity=26.5734265734266, Blast_Score=86, Evalue=4e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003777 [H]

Pfam domain/function: PF02625 XdhC_CoxI [H]

EC number: NA

Molecular weight: Translated: 35327; Mature: 35327

Theoretical pI: Translated: 8.04; Mature: 8.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVAQVAHAPPAWPAWPGYALLDDLLPTLSAWQRAGQRVAMATLIDVQGSSPRPLGSEMAI
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCEEE
SADGSVAGYVSGGCVEAAVAHEAMAALRDGQPRWLDYGEGSQVLDIQLSCGGRIGVLVWP
ECCCCEEEEECCCHHHHHHHHHHHHHHHCCCCCEEECCCCCEEEEEEEECCCEEEEEEEC
VPDLGEHLARWRNARQHRRAFHVALDRASGTVRYLANAQDARAGEFVRTHRPPLRLVLVG
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCHHHHHCCCCEEEEEEC
ADPSLLALVSLASQMGIDVRVLRPHGPGEPPPGLAPEHYDRRALGDALQDLHLDADTALY
CCHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHH
SLAHDAEIDMQVAQRGLASPVACIGILGSRQKRQCRLQALRALGYGDAALARLRMPAGWR
HHHCCCCCHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHCCCCCCC
MGRSSPHTIALGIIAEATQAVVDLQAVTASR
CCCCCCCEEEEHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MVAQVAHAPPAWPAWPGYALLDDLLPTLSAWQRAGQRVAMATLIDVQGSSPRPLGSEMAI
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCEEE
SADGSVAGYVSGGCVEAAVAHEAMAALRDGQPRWLDYGEGSQVLDIQLSCGGRIGVLVWP
ECCCCEEEEECCCHHHHHHHHHHHHHHHCCCCCEEECCCCCEEEEEEEECCCEEEEEEEC
VPDLGEHLARWRNARQHRRAFHVALDRASGTVRYLANAQDARAGEFVRTHRPPLRLVLVG
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCHHHHHCCCCEEEEEEC
ADPSLLALVSLASQMGIDVRVLRPHGPGEPPPGLAPEHYDRRALGDALQDLHLDADTALY
CCHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHH
SLAHDAEIDMQVAQRGLASPVACIGILGSRQKRQCRLQALRALGYGDAALARLRMPAGWR
HHHCCCCCHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHCCCCCCC
MGRSSPHTIALGIIAEATQAVVDLQAVTASR
CCCCCCCEEEEHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]