| Definition | Xanthomonas campestris pv. vesicatoria str. 85-10 chromosome, complete genome. |
|---|---|
| Accession | NC_007508 |
| Length | 5,178,466 |
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The map label for this gene is yhcX [H]
Identifier: 78048565
GI number: 78048565
Start: 3422599
End: 3423483
Strand: Reverse
Name: yhcX [H]
Synonym: XCV3009
Alternate gene names: 78048565
Gene position: 3423483-3422599 (Counterclockwise)
Preceding gene: 78048566
Following gene: 78048564
Centisome position: 66.11
GC content: 68.02
Gene sequence:
>885_bases ATGAAAATTGCCGTTGCCAAATACCCCATCGGCAAGCCAGTCGACTTCGCCGCGTTTGCGGCGCGCCAGTCGGCCCTGAT CGCCGAAGCCGCCGCTGCCGGTGCGCGGGTGGTGGTGCTGCCCGAATATCTGTCGCTGGAACTGGGCGCAACGTTCGACA CGCAGATTTCTGCCGGCCTGCCCGAATCGCTGGCGGCCATCCAGGCGCTGCGCGCGCCGTGGCTGGAACTGTTTGCCGGC CTGGCGCGGGAACATCGGCTGCACCTGATTGCCGGCAGTTTTCTGCTGGATCTGGGGCAGGGGCGCTACCGCAATCGCAG CGACTGGTTCACCCCGGAGGGCCTGCACGGCTGGCAGGACAAGTTGCAGCTCACCGGCTTCGAAAAGGCCACCGGGCTGA TCGAGCCGGGCGAGGAACTGAAGGTGTTCGAACTGGACGGCATTCGCGCCGCGATCGCGATCTGCTACGACAGCGAGTTC CCGCTGCCGGTGCGTGCGCAATACGAGGCCGGCGCACGGTTGTTGATCGTGCCCAGCTGCACCGACACCGCCGCCGGCGC CATGCGCGTGCGCATCGGCTGCCTGGCGCGCGCGCTGGAAAACCGCGTGTTCGTCGCGCAATCGGTGACTGCAGGCCAAG CGCCGTGGAGCCCGGCGTTGGACATCAATACCGGCGACGCGGCGGTGTTTGCGCCAATGGATGTCGGCTTCCCCGCCGAC GGCGTGCTGGCGCAGACCCAGGGCGAGACGGTGTGGGCACTGGCCGAGTTGGACTTTGCGGCGTTCGAGGCCAGCCGCGC GCAGGCGCAGGTGGCCAACGACCGCGATTGGCCGGGGCAGTTGGCGGCCGATGTGGTGCGTGCCAAGCTGGCCGCGTTCG GTTGA
Upstream 100 bases:
>100_bases CGACAAGCATCACGAACGGTCTGCAAAATCGCTGCACAATGCGTTGGCGAGCTGGTCTGATTGCTTCGCCGCTTCGATCC AACACCCCAAAGGCCACCAG
Downstream 100 bases:
>100_bases TTCATCACCCACAGGTTCCCAATGGCCAAGAAAACCCTGATTCCGCATAGCGTCCGGCTCGAATTCGCGCCCGGTGCGCT GGTGCACAGCAATCTGTCCG
Product: carbon-nitrogen hydrolase family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 294; Mature: 294
Protein sequence:
>294_residues MKIAVAKYPIGKPVDFAAFAARQSALIAEAAAAGARVVVLPEYLSLELGATFDTQISAGLPESLAAIQALRAPWLELFAG LAREHRLHLIAGSFLLDLGQGRYRNRSDWFTPEGLHGWQDKLQLTGFEKATGLIEPGEELKVFELDGIRAAIAICYDSEF PLPVRAQYEAGARLLIVPSCTDTAAGAMRVRIGCLARALENRVFVAQSVTAGQAPWSPALDINTGDAAVFAPMDVGFPAD GVLAQTQGETVWALAELDFAAFEASRAQAQVANDRDWPGQLAADVVRAKLAAFG
Sequences:
>Translated_294_residues MKIAVAKYPIGKPVDFAAFAARQSALIAEAAAAGARVVVLPEYLSLELGATFDTQISAGLPESLAAIQALRAPWLELFAG LAREHRLHLIAGSFLLDLGQGRYRNRSDWFTPEGLHGWQDKLQLTGFEKATGLIEPGEELKVFELDGIRAAIAICYDSEF PLPVRAQYEAGARLLIVPSCTDTAAGAMRVRIGCLARALENRVFVAQSVTAGQAPWSPALDINTGDAAVFAPMDVGFPAD GVLAQTQGETVWALAELDFAAFEASRAQAQVANDRDWPGQLAADVVRAKLAAFG >Mature_294_residues MKIAVAKYPIGKPVDFAAFAARQSALIAEAAAAGARVVVLPEYLSLELGATFDTQISAGLPESLAAIQALRAPWLELFAG LAREHRLHLIAGSFLLDLGQGRYRNRSDWFTPEGLHGWQDKLQLTGFEKATGLIEPGEELKVFELDGIRAAIAICYDSEF PLPVRAQYEAGARLLIVPSCTDTAAGAMRVRIGCLARALENRVFVAQSVTAGQAPWSPALDINTGDAAVFAPMDVGFPAD GVLAQTQGETVWALAELDFAAFEASRAQAQVANDRDWPGQLAADVVRAKLAAFG
Specific function: Unknown
COG id: COG0388
COG function: function code R; Predicted amidohydrolase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 N-acetyltransferase domain [H]
Homologues:
Organism=Drosophila melanogaster, GI21355835, Length=249, Percent_Identity=23.6947791164659, Blast_Score=71, Evalue=9e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000182 - InterPro: IPR016181 - InterPro: IPR003010 - InterPro: IPR001110 [H]
Pfam domain/function: PF00583 Acetyltransf_1; PF00795 CN_hydrolase [H]
EC number: NA
Molecular weight: Translated: 31363; Mature: 31363
Theoretical pI: Translated: 4.68; Mature: 4.68
Prosite motif: PS50263 CN_HYDROLASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIAVAKYPIGKPVDFAAFAARQSALIAEAAAAGARVVVLPEYLSLELGATFDTQISAGL CEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEECHHHEEEECCCCCCCCCCCC PESLAAIQALRAPWLELFAGLAREHRLHLIAGSFLLDLGQGRYRNRSDWFTPEGLHGWQD CHHHHHHHHHHCHHHHHHHHHHHHCEEEEEEHHHHHHCCCCCCCCCCCCCCCCCCCCCCH KLQLTGFEKATGLIEPGEELKVFELDGIRAAIAICYDSEFPLPVRAQYEAGARLLIVPSC HEEECCCHHHCCCCCCCCCEEEEEECCCEEEEEEEECCCCCCCEEEECCCCCEEEEEECC TDTAAGAMRVRIGCLARALENRVFVAQSVTAGQAPWSPALDINTGDAAVFAPMDVGFPAD CCCCCCHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCEECCCCCEEEEEEECCCCCCC GVLAQTQGETVWALAELDFAAFEASRAQAQVANDRDWPGQLAADVVRAKLAAFG CEEEECCCCEEEEEECCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCC >Mature Secondary Structure MKIAVAKYPIGKPVDFAAFAARQSALIAEAAAAGARVVVLPEYLSLELGATFDTQISAGL CEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEECHHHEEEECCCCCCCCCCCC PESLAAIQALRAPWLELFAGLAREHRLHLIAGSFLLDLGQGRYRNRSDWFTPEGLHGWQD CHHHHHHHHHHCHHHHHHHHHHHHCEEEEEEHHHHHHCCCCCCCCCCCCCCCCCCCCCCH KLQLTGFEKATGLIEPGEELKVFELDGIRAAIAICYDSEFPLPVRAQYEAGARLLIVPSC HEEECCCHHHCCCCCCCCCEEEEEECCCEEEEEEEECCCCCCCEEEECCCCCEEEEEECC TDTAAGAMRVRIGCLARALENRVFVAQSVTAGQAPWSPALDINTGDAAVFAPMDVGFPAD CCCCCCHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCEECCCCCEEEEEEECCCCCCC GVLAQTQGETVWALAELDFAAFEASRAQAQVANDRDWPGQLAADVVRAKLAAFG CEEEECCCCEEEEEECCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8969498; 9384377 [H]