| Definition | Xanthomonas campestris pv. vesicatoria str. 85-10 chromosome, complete genome. |
|---|---|
| Accession | NC_007508 |
| Length | 5,178,466 |
Click here to switch to the map view.
The map label for this gene is 78048132
Identifier: 78048132
GI number: 78048132
Start: 2903556
End: 2904536
Strand: Reverse
Name: 78048132
Synonym: XCV2576
Alternate gene names: NA
Gene position: 2904536-2903556 (Counterclockwise)
Preceding gene: 78048133
Following gene: 78048131
Centisome position: 56.09
GC content: 67.89
Gene sequence:
>981_bases ATGCGCCTGGGACGCCGGTCCGGTCGAGCAGTACGCAGCGCCAGTGTCCTGACGACGCCAGGAGCAGCCGAAGAAACGAC TGCGCCGTTGCCAGGCTTGGGCGGCCGGTGTCTGGAATCTGCATGGGCCACGCGTGCACTGCCGGTCCCGTGCACCATTG GCTCGCACCTGACGGCCGCGTGCGTCGCGTTGCTGGCCGGGCTGAGCGGCCTGCTGGCGGCGTGTCCGGTGCTTGCGCAA ACCGCCGCCGCCACTGCCTGCGACGCGCAAAGCGTGGCGGCGGTGGCAGCTGGTGCGGTGTCCGGCGCCGCAGGGGCGGT GCCGGTCGACCATGCCGTGGCACAGACCTGCAAGCCGTGGCCGTACGACCCATCGATACGACTGGCGGCCATTGCGTTCG CCAGCGATGCCACCACCGAGGCAGGCGAACGCAACCTTGAGTTGCGCGTTGCCATGCTCGATGCCCGCACTGCCCAGGTC GTCGCCTTGTACATGCAGGACATGGGCGAAGATGCCGGCTTCGAACTTGCTGCCGACAGTCTGCGCCTGGATACCGCACG CTATGACCTGGCGCAGGGCGTGCGTGCGGTTGGCGTGGTGGTGCACAGCGTTGCGCGCGGGCCCAGTTGTCCGGATTTCG ACAGCAACGATGCATTGACCTTGCTGGTGCGCGAACAGCGCCGGTTGCGCCCGGTGCTGCAGCGGGATCTCACTGTCTGG CGGCGGGTAAAAGGCGAACCGTGCAACTGGGGCGCGACGGGTGTGGTGACCGAACGCGGCACGCTCACCCTGTCGATGGA CGCGCCAGTCCACGCGGGCTATGCCGACATCGCAGTCACTGCCAACCTGGTGACTTCCACCACCGTCGAGGATGCAGACG ACATCGAGCGCACGCACCGCCAGCGCCAGGTGCTGCGCTACGACGGCACGCGATATGCGCCTGTGTCACGCTCCGACGAC TCCTGGCCGTTCGGCAACTAA
Upstream 100 bases:
>100_bases CCGGCGCGGTGGTGCGCGTGCCGCTGTTCGTCAACCAGGACGAGATCATCAAGGTCGATACCCGTTCGGGCGAATACTCG GCGCGCGTCAAGTAATCCAG
Downstream 100 bases:
>100_bases CTTCAATGGATCCACTCATGACCAACGCTCCGCCCGAACCCTGCGACCTGCTGATCGAGGCCGGCTACGTCGTGCCGATC GAACCGCATGCGGTGGTGCT
Product: putative secreted protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 326; Mature: 326
Protein sequence:
>326_residues MRLGRRSGRAVRSASVLTTPGAAEETTAPLPGLGGRCLESAWATRALPVPCTIGSHLTAACVALLAGLSGLLAACPVLAQ TAAATACDAQSVAAVAAGAVSGAAGAVPVDHAVAQTCKPWPYDPSIRLAAIAFASDATTEAGERNLELRVAMLDARTAQV VALYMQDMGEDAGFELAADSLRLDTARYDLAQGVRAVGVVVHSVARGPSCPDFDSNDALTLLVREQRRLRPVLQRDLTVW RRVKGEPCNWGATGVVTERGTLTLSMDAPVHAGYADIAVTANLVTSTTVEDADDIERTHRQRQVLRYDGTRYAPVSRSDD SWPFGN
Sequences:
>Translated_326_residues MRLGRRSGRAVRSASVLTTPGAAEETTAPLPGLGGRCLESAWATRALPVPCTIGSHLTAACVALLAGLSGLLAACPVLAQ TAAATACDAQSVAAVAAGAVSGAAGAVPVDHAVAQTCKPWPYDPSIRLAAIAFASDATTEAGERNLELRVAMLDARTAQV VALYMQDMGEDAGFELAADSLRLDTARYDLAQGVRAVGVVVHSVARGPSCPDFDSNDALTLLVREQRRLRPVLQRDLTVW RRVKGEPCNWGATGVVTERGTLTLSMDAPVHAGYADIAVTANLVTSTTVEDADDIERTHRQRQVLRYDGTRYAPVSRSDD SWPFGN >Mature_326_residues MRLGRRSGRAVRSASVLTTPGAAEETTAPLPGLGGRCLESAWATRALPVPCTIGSHLTAACVALLAGLSGLLAACPVLAQ TAAATACDAQSVAAVAAGAVSGAAGAVPVDHAVAQTCKPWPYDPSIRLAAIAFASDATTEAGERNLELRVAMLDARTAQV VALYMQDMGEDAGFELAADSLRLDTARYDLAQGVRAVGVVVHSVARGPSCPDFDSNDALTLLVREQRRLRPVLQRDLTVW RRVKGEPCNWGATGVVTERGTLTLSMDAPVHAGYADIAVTANLVTSTTVEDADDIERTHRQRQVLRYDGTRYAPVSRSDD SWPFGN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34232; Mature: 34232
Theoretical pI: Translated: 6.04; Mature: 6.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLGRRSGRAVRSASVLTTPGAAEETTAPLPGLGGRCLESAWATRALPVPCTIGSHLTAA CCCCCCCCCHHHCCEEEECCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHH CVALLAGLSGLLAACPVLAQTAAATACDAQSVAAVAAGAVSGAAGAVPVDHAVAQTCKPW HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCC PYDPSIRLAAIAFASDATTEAGERNLELRVAMLDARTAQVVALYMQDMGEDAGFELAADS CCCCCCEEEEEEECCCCCCCCCCCCEEEEEEEECCCHHHHHHHHHHHCCCCCCCEEEHHH LRLDTARYDLAQGVRAVGVVVHSVARGPSCPDFDSNDALTLLVREQRRLRPVLQRDLTVW HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHH RRVKGEPCNWGATGVVTERGTLTLSMDAPVHAGYADIAVTANLVTSTTVEDADDIERTHR HHHCCCCCCCCCCEEEEECCEEEEEECCCCCCCCHHHEEEEHHHCCCCCCCHHHHHHHHH QRQVLRYDGTRYAPVSRSDDSWPFGN HHHHHHHCCCEECCCCCCCCCCCCCC >Mature Secondary Structure MRLGRRSGRAVRSASVLTTPGAAEETTAPLPGLGGRCLESAWATRALPVPCTIGSHLTAA CCCCCCCCCHHHCCEEEECCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHH CVALLAGLSGLLAACPVLAQTAAATACDAQSVAAVAAGAVSGAAGAVPVDHAVAQTCKPW HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCC PYDPSIRLAAIAFASDATTEAGERNLELRVAMLDARTAQVVALYMQDMGEDAGFELAADS CCCCCCEEEEEEECCCCCCCCCCCCEEEEEEEECCCHHHHHHHHHHHCCCCCCCEEEHHH LRLDTARYDLAQGVRAVGVVVHSVARGPSCPDFDSNDALTLLVREQRRLRPVLQRDLTVW HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHH RRVKGEPCNWGATGVVTERGTLTLSMDAPVHAGYADIAVTANLVTSTTVEDADDIERTHR HHHCCCCCCCCCCEEEEECCEEEEEECCCCCCCCHHHEEEEHHHCCCCCCCHHHHHHHHH QRQVLRYDGTRYAPVSRSDDSWPFGN HHHHHHHCCCEECCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA