| Definition | Xanthomonas campestris pv. vesicatoria str. 85-10 chromosome, complete genome. |
|---|---|
| Accession | NC_007508 |
| Length | 5,178,466 |
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The map label for this gene is argG [H]
Identifier: 78048106
GI number: 78048106
Start: 2877639
End: 2878874
Strand: Reverse
Name: argG [H]
Synonym: XCV2550
Alternate gene names: 78048106
Gene position: 2878874-2877639 (Counterclockwise)
Preceding gene: 78048107
Following gene: 78048105
Centisome position: 55.59
GC content: 63.59
Gene sequence:
>1236_bases ATGAGCGCTGCTTCCACCAATCCCGAATCCCGAATCCCGACTCCCGGCACCAAGGACATCGTTCTCGCGTTTTCCGGTGG TCTGGACACCAGCTTCTGCATTCCGTATCTGCAGGAGCGCGGCTATGCGGTGCACACCGTGTTTGCCGACACCGGTGGTG TGGATGCCGAAGAGCGTGAGTTCATCGAGAAGCGCGCCGCCGAATTGGGCGCGGCCAGCCACGTCACCGTGGACGGTGGC CCGGCAATCTGGGAAGGCTTCGTCAAGCCGTTCGTGTGGGCGGGCGAGGGGTACCAGGGCCAGTACCCGTTGCTGGTGTC CGACCGTTACCTGATCGTGGATGCTGCGCTCAAGCGTGCCGAAGAGTTGGGCACACGCATCATTGCGCATGGTTGCACCG GCATGGGCAACGATCAGGTGCGTTTCGACCTGGCAGTGAAGGCGCTGGGCGACTACCAGATCGTGGCGCCGATCCGCGAG ATCCAGAAAGAGCACACCCAGACCCGCGCCTATGAGCAGAAGTATCTGGAAGCGCGTGGATTCGGCGTGCGTGCCAAACA GCAGGCCTACACCATCAACGAGAACCTGCTGGGCCTGACCATGTCCGGCGGCGAGATCGATCGTTGGGAAGCGCCGGGCG AGGGCGCGCGCGGCTGGTGCGCGCCGCGCAGTGCCTGGCCGAGCGAAGCGTTGACGGTGACGCTGAAGTTCGTCGAAGGC GAAGCGGTGGAACTGGACGGTAAGCCGCTGCCGGGTGCCAAGATCCTGGCCAAGCTCAACACCTTGTTTGCGCAATACGG CGTGGGCCGCGGCGTCTATACCGGCGACACCGTGATCGGTTTGAAGGGCCGCATCGTGTTCGAAGCGCCGGGCCTGATTT CGCTGATCACCGCGCACCGTGCACTGGAAGATGCGGTGCTGACCAAGCAGCAGAACCGCTTCAAGCCGGACGTGGCGCGC AAATGGGTGGAGCTGGTGTACGAAGGCTTCTATCACGACCCGCTCAAGAGCGATATCGAGGCGTTCCTGAAGTCCTCGCA GTCCAAGGTCAATGGCGAGGTGACGCTGGAAACCCGCGGCGGCCGCGTCGATGCGGTGGCGGTACGCTCGCCGCACCTGC TCAACACCAAGGGTGCGACCTACGCGCAATCGGCCGACTGGGGCGTGGAAGAAGCGGAAGGCTTCATCAAGCTGTTCGGG ATGAGCTCGACGCTGTACGCGCAGGTCAACCGCTGA
Upstream 100 bases:
>100_bases CATGGCGGCGCTTGCTTCGCAAGCGGGAATCGGGAATCGGGATTAGAGAATCGCAACAGCAACACCCTTGGCCCCCACAT TTACGTACTAAGGAACAATG
Downstream 100 bases:
>100_bases GCAAAAGCCCCTCTCCCCCGGGGAGAGGGGCTTGGGGTGCCGCAGAAACCTCCAAGATCGATCATGACGAACGCGTCGCC ACGCGCCAGTCATGGGGAAC
Product: argininosuccinate synthase
Products: NA
Alternate protein names: Citrulline--aspartate ligase [H]
Number of amino acids: Translated: 411; Mature: 410
Protein sequence:
>411_residues MSAASTNPESRIPTPGTKDIVLAFSGGLDTSFCIPYLQERGYAVHTVFADTGGVDAEEREFIEKRAAELGAASHVTVDGG PAIWEGFVKPFVWAGEGYQGQYPLLVSDRYLIVDAALKRAEELGTRIIAHGCTGMGNDQVRFDLAVKALGDYQIVAPIRE IQKEHTQTRAYEQKYLEARGFGVRAKQQAYTINENLLGLTMSGGEIDRWEAPGEGARGWCAPRSAWPSEALTVTLKFVEG EAVELDGKPLPGAKILAKLNTLFAQYGVGRGVYTGDTVIGLKGRIVFEAPGLISLITAHRALEDAVLTKQQNRFKPDVAR KWVELVYEGFYHDPLKSDIEAFLKSSQSKVNGEVTLETRGGRVDAVAVRSPHLLNTKGATYAQSADWGVEEAEGFIKLFG MSSTLYAQVNR
Sequences:
>Translated_411_residues MSAASTNPESRIPTPGTKDIVLAFSGGLDTSFCIPYLQERGYAVHTVFADTGGVDAEEREFIEKRAAELGAASHVTVDGG PAIWEGFVKPFVWAGEGYQGQYPLLVSDRYLIVDAALKRAEELGTRIIAHGCTGMGNDQVRFDLAVKALGDYQIVAPIRE IQKEHTQTRAYEQKYLEARGFGVRAKQQAYTINENLLGLTMSGGEIDRWEAPGEGARGWCAPRSAWPSEALTVTLKFVEG EAVELDGKPLPGAKILAKLNTLFAQYGVGRGVYTGDTVIGLKGRIVFEAPGLISLITAHRALEDAVLTKQQNRFKPDVAR KWVELVYEGFYHDPLKSDIEAFLKSSQSKVNGEVTLETRGGRVDAVAVRSPHLLNTKGATYAQSADWGVEEAEGFIKLFG MSSTLYAQVNR >Mature_410_residues SAASTNPESRIPTPGTKDIVLAFSGGLDTSFCIPYLQERGYAVHTVFADTGGVDAEEREFIEKRAAELGAASHVTVDGGP AIWEGFVKPFVWAGEGYQGQYPLLVSDRYLIVDAALKRAEELGTRIIAHGCTGMGNDQVRFDLAVKALGDYQIVAPIREI QKEHTQTRAYEQKYLEARGFGVRAKQQAYTINENLLGLTMSGGEIDRWEAPGEGARGWCAPRSAWPSEALTVTLKFVEGE AVELDGKPLPGAKILAKLNTLFAQYGVGRGVYTGDTVIGLKGRIVFEAPGLISLITAHRALEDAVLTKQQNRFKPDVARK WVELVYEGFYHDPLKSDIEAFLKSSQSKVNGEVTLETRGGRVDAVAVRSPHLLNTKGATYAQSADWGVEEAEGFIKLFGM SSTLYAQVNR
Specific function: Arginine biosynthesis; seventh step. [C]
COG id: COG0137
COG function: function code E; Argininosuccinate synthase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the argininosuccinate synthase family. Type 1 subfamily [H]
Homologues:
Organism=Homo sapiens, GI53759107, Length=404, Percent_Identity=27.2277227722772, Blast_Score=126, Evalue=3e-29, Organism=Homo sapiens, GI16950633, Length=404, Percent_Identity=27.2277227722772, Blast_Score=126, Evalue=3e-29, Organism=Escherichia coli, GI1789563, Length=374, Percent_Identity=26.7379679144385, Blast_Score=88, Evalue=1e-18, Organism=Saccharomyces cerevisiae, GI6324514, Length=360, Percent_Identity=29.1666666666667, Blast_Score=118, Evalue=2e-27, Organism=Drosophila melanogaster, GI21358151, Length=396, Percent_Identity=30.050505050505, Blast_Score=146, Evalue=2e-35,
Paralogues:
None
Copy number: 380 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001518 - InterPro: IPR018223 - InterPro: IPR014729 [H]
Pfam domain/function: PF00764 Arginosuc_synth [H]
EC number: =6.3.4.5 [H]
Molecular weight: Translated: 44821; Mature: 44690
Theoretical pI: Translated: 5.73; Mature: 5.73
Prosite motif: PS00564 ARGININOSUCCIN_SYN_1 ; PS00565 ARGININOSUCCIN_SYN_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAASTNPESRIPTPGTKDIVLAFSGGLDTSFCIPYLQERGYAVHTVFADTGGVDAEERE CCCCCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHCCCEEEEEEECCCCCCHHHHH FIEKRAAELGAASHVTVDGGPAIWEGFVKPFVWAGEGYQGQYPLLVSDRYLIVDAALKRA HHHHHHHHCCCCCEEEECCCHHHHHHHHCCEEECCCCCCCCCCEEECCCEEEEHHHHHHH EELGTRIIAHGCTGMGNDQVRFDLAVKALGDYQIVAPIREIQKEHTQTRAYEQKYLEARG HHHHHEEEECCCCCCCCCCEEEEEEEEECCCEEEEHHHHHHHHHHHHHHHHHHHHHHHCC FGVRAKQQAYTINENLLGLTMSGGEIDRWEAPGEGARGWCAPRSAWPSEALTVTLKFVEG CCCCCCCCEEEECCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECC EAVELDGKPLPGAKILAKLNTLFAQYGVGRGVYTGDTVIGLKGRIVFEAPGLISLITAHR CEEEECCCCCCHHHHHHHHHHHHHHHCCCCCEECCCEEEEECCEEEEECCCHHHHHHHHH ALEDAVLTKQQNRFKPDVARKWVELVYEGFYHDPLKSDIEAFLKSSQSKVNGEVTLETRG HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCEEEEEECC GRVDAVAVRSPHLLNTKGATYAQSADWGVEEAEGFIKLFGMSSTLYAQVNR CEEEEEEECCCCEECCCCCCCCCCCCCCHHHHCCEEEEEECCCEEEEEECC >Mature Secondary Structure SAASTNPESRIPTPGTKDIVLAFSGGLDTSFCIPYLQERGYAVHTVFADTGGVDAEERE CCCCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHCCCEEEEEEECCCCCCHHHHH FIEKRAAELGAASHVTVDGGPAIWEGFVKPFVWAGEGYQGQYPLLVSDRYLIVDAALKRA HHHHHHHHCCCCCEEEECCCHHHHHHHHCCEEECCCCCCCCCCEEECCCEEEEHHHHHHH EELGTRIIAHGCTGMGNDQVRFDLAVKALGDYQIVAPIREIQKEHTQTRAYEQKYLEARG HHHHHEEEECCCCCCCCCCEEEEEEEEECCCEEEEHHHHHHHHHHHHHHHHHHHHHHHCC FGVRAKQQAYTINENLLGLTMSGGEIDRWEAPGEGARGWCAPRSAWPSEALTVTLKFVEG CCCCCCCCEEEECCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECC EAVELDGKPLPGAKILAKLNTLFAQYGVGRGVYTGDTVIGLKGRIVFEAPGLISLITAHR CEEEECCCCCCHHHHHHHHHHHHHHHCCCCCEECCCEEEEECCEEEEECCCHHHHHHHHH ALEDAVLTKQQNRFKPDVARKWVELVYEGFYHDPLKSDIEAFLKSSQSKVNGEVTLETRG HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCEEEEEECC GRVDAVAVRSPHLLNTKGATYAQSADWGVEEAEGFIKLFGMSSTLYAQVNR CEEEEEEECCCCEECCCCCCCCCCCCCCHHHHCCEEEEEECCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12024217 [H]