| Definition | Xanthomonas campestris pv. vesicatoria str. 85-10 chromosome, complete genome. |
|---|---|
| Accession | NC_007508 |
| Length | 5,178,466 |
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The map label for this gene is 78048027
Identifier: 78048027
GI number: 78048027
Start: 2793871
End: 2794911
Strand: Reverse
Name: 78048027
Synonym: XCV2471
Alternate gene names: NA
Gene position: 2794911-2793871 (Counterclockwise)
Preceding gene: 78048028
Following gene: 78048026
Centisome position: 53.97
GC content: 57.93
Gene sequence:
>1041_bases GTGGCTGACGGCACATGCTCGTTCTGCGGTGAAACAACCGTCTACTTCTTTCCCGGTGGCTTGTGCGTCGCATGCACCGG TAAAAACGCACGCATCCGCATGCAGGAACAGCCCACGCAATCGCGTGAGTTGTCCGCTTTCGATACGTCTGTCGGCGTCA TGCAGGCCGCTACGCGCCGCACTGAAATCGCCGCAGAGAAGATCCAAAAGAACAAGCGTGTGGTCGGCACAAGCGTGCGT GAGTTCGACGCTGCCCATCCGATCGCATTGACCGCTGAGGGCCAGCGCGCAGCGCTGGCCCTTGGGCTTGTCCATTACAA AACAAGTGACACGCGGGCCTCTACGACCGGCACCGTGACCATCGAAATCGACCCGCTACAAGCGCGGGCGCAACGGCTGC GCAAGTCCGTGATTACCGGAGCACGTCTGCATGACCAGGAAGCGAAAAAAGGCTCCTTCCGGGGTGCGTGGTATTTCCTC ACGCTCACCTACCGTGATGGAAGCGACAGCAGCCCTCGTGACGTTAGCGAACTATTTAAACGCATGCGCGGCCACTTCAA TCGCCTTAAATCTGGGCGCGCACGGTGGAACCGTGAAAGCTTTCGTTACGTATGGGTCGGAGAGCTCACCCAGCGATTCC GCCCGCACTACCACGTAATGCTGTGGGTTCCGACGGGTATGTATTTCGGCAAAGTCGATCAACGCGGCTGGTGGCCTCAT GGCACAACGCAAATTGAAAAAGCCCGCAACTGCGTCGGCTATCTCGCGAAATACGCGAGCAAGTTCACTGCCCTTACAGC TGGAGCTTTTCCCAAAGGCTTCCGCACACATGGCATTGGTGGACTCGATACCGAATCTAAGCGCGAGTTGCGCTGGTGGA AAGCCCCGAAAGATGCGCGTGAAGCTCTCGGCGGGGAAGCGGATATCCGCAAAGCAAAGGGCGGATGGTTCGACAGGCTT ACCGGAGAGTTCTGGCCGTCTCCGTGGAAAGTCACATTCATTTTCGGCCGGACATTCGCCTGGAAGGTAGTCCAACTATG A
Upstream 100 bases:
>100_bases GTCTTGACCATCGTCGTCAATGGCAATCCTGTCGAACAGAGCTATTTCGCATCTCGCACCGATGCTGCTGTTGCACGTGA TGCTGCCATGGAGTTCTACC
Downstream 100 bases:
>100_bases AAGTCCAAGTCATGAGTTCCGCTGTCGCTGTTCGTTCCTTTCCTGCTCGCGAGGGTAAGCCCGCGACGCATTTCCGTGAG CAGACCGCAGCGGTGTTGCG
Product: filamentous phage phiLf replication initiation protein II
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 346; Mature: 345
Protein sequence:
>346_residues MADGTCSFCGETTVYFFPGGLCVACTGKNARIRMQEQPTQSRELSAFDTSVGVMQAATRRTEIAAEKIQKNKRVVGTSVR EFDAAHPIALTAEGQRAALALGLVHYKTSDTRASTTGTVTIEIDPLQARAQRLRKSVITGARLHDQEAKKGSFRGAWYFL TLTYRDGSDSSPRDVSELFKRMRGHFNRLKSGRARWNRESFRYVWVGELTQRFRPHYHVMLWVPTGMYFGKVDQRGWWPH GTTQIEKARNCVGYLAKYASKFTALTAGAFPKGFRTHGIGGLDTESKRELRWWKAPKDAREALGGEADIRKAKGGWFDRL TGEFWPSPWKVTFIFGRTFAWKVVQL
Sequences:
>Translated_346_residues MADGTCSFCGETTVYFFPGGLCVACTGKNARIRMQEQPTQSRELSAFDTSVGVMQAATRRTEIAAEKIQKNKRVVGTSVR EFDAAHPIALTAEGQRAALALGLVHYKTSDTRASTTGTVTIEIDPLQARAQRLRKSVITGARLHDQEAKKGSFRGAWYFL TLTYRDGSDSSPRDVSELFKRMRGHFNRLKSGRARWNRESFRYVWVGELTQRFRPHYHVMLWVPTGMYFGKVDQRGWWPH GTTQIEKARNCVGYLAKYASKFTALTAGAFPKGFRTHGIGGLDTESKRELRWWKAPKDAREALGGEADIRKAKGGWFDRL TGEFWPSPWKVTFIFGRTFAWKVVQL >Mature_345_residues ADGTCSFCGETTVYFFPGGLCVACTGKNARIRMQEQPTQSRELSAFDTSVGVMQAATRRTEIAAEKIQKNKRVVGTSVRE FDAAHPIALTAEGQRAALALGLVHYKTSDTRASTTGTVTIEIDPLQARAQRLRKSVITGARLHDQEAKKGSFRGAWYFLT LTYRDGSDSSPRDVSELFKRMRGHFNRLKSGRARWNRESFRYVWVGELTQRFRPHYHVMLWVPTGMYFGKVDQRGWWPHG TTQIEKARNCVGYLAKYASKFTALTAGAFPKGFRTHGIGGLDTESKRELRWWKAPKDAREALGGEADIRKAKGGWFDRLT GEFWPSPWKVTFIFGRTFAWKVVQL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39149; Mature: 39018
Theoretical pI: Translated: 10.73; Mature: 10.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADGTCSFCGETTVYFFPGGLCVACTGKNARIRMQEQPTQSRELSAFDTSVGVMQAATRR CCCCCCCCCCCCEEEEECCCEEEEEECCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHH TEIAAEKIQKNKRVVGTSVREFDAAHPIALTAEGQRAALALGLVHYKTSDTRASTTGTVT HHHHHHHHHCCCCEECCCHHHHCCCCCEEEEECCCCEEEEEEEEEEECCCCCCCCCEEEE IEIDPLQARAQRLRKSVITGARLHDQEAKKGSFRGAWYFLTLTYRDGSDSSPRDVSELFK EEECCHHHHHHHHHHHHHCCCHHCCCHHHCCCCCEEEEEEEEEEECCCCCCCHHHHHHHH RMRGHFNRLKSGRARWNRESFRYVWVGELTQRFRPHYHVMLWVPTGMYFGKVDQRGWWPH HHHHHHHHHHCCCCCCCCCCEEEEEEEHHHHHCCCCEEEEEEEECCCEECCCCCCCCCCC GTTQIEKARNCVGYLAKYASKFTALTAGAFPKGFRTHGIGGLDTESKRELRWWKAPKDAR CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCHHHH EALGGEADIRKAKGGWFDRLTGEFWPSPWKVTFIFGRTFAWKVVQL HHCCCCCHHHHCCCCCHHHCCCCCCCCCEEEEEEECCCEEEEEECC >Mature Secondary Structure ADGTCSFCGETTVYFFPGGLCVACTGKNARIRMQEQPTQSRELSAFDTSVGVMQAATRR CCCCCCCCCCCEEEEECCCEEEEEECCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHH TEIAAEKIQKNKRVVGTSVREFDAAHPIALTAEGQRAALALGLVHYKTSDTRASTTGTVT HHHHHHHHHCCCCEECCCHHHHCCCCCEEEEECCCCEEEEEEEEEEECCCCCCCCCEEEE IEIDPLQARAQRLRKSVITGARLHDQEAKKGSFRGAWYFLTLTYRDGSDSSPRDVSELFK EEECCHHHHHHHHHHHHHCCCHHCCCHHHCCCCCEEEEEEEEEEECCCCCCCHHHHHHHH RMRGHFNRLKSGRARWNRESFRYVWVGELTQRFRPHYHVMLWVPTGMYFGKVDQRGWWPH HHHHHHHHHHCCCCCCCCCCEEEEEEEHHHHHCCCCEEEEEEEECCCEECCCCCCCCCCC GTTQIEKARNCVGYLAKYASKFTALTAGAFPKGFRTHGIGGLDTESKRELRWWKAPKDAR CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCHHHH EALGGEADIRKAKGGWFDRLTGEFWPSPWKVTFIFGRTFAWKVVQL HHCCCCCHHHHCCCCCHHHCCCCCCCCCEEEEEEECCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA