Click here to switch to the map view.

The map label for this gene is 78047959

Identifier: 78047959

GI number: 78047959

Start: 2726588

End: 2726974

Strand: Reverse

Name: 78047959

Synonym: XCV2403

Alternate gene names: NA

Gene position: 2726974-2726588 (Counterclockwise)

Preceding gene: 78047960

Following gene: 78047958

Centisome position: 52.66

GC content: 66.41

Gene sequence:

>387_bases
ATGCCAGCAGCCAGGGTTCCAGGCTGCCGCGGGTCTCTCCCGCGTTGCCCACCAGTCCGCATCGCATCAGGTCTGCGGAC
GCGCGTCCCCGTGACGTCGATGCTTTTTATCAACCGCGTGCGGGAGCTGCCATCCCGTGAGGGACGAGGCCCCGCTTTTC
CAAGGAGCCCGTCCATGTCCCAGCAAGCCTCTTTCGGCCAACTGGCCCTGACCTACTGCGGCAAGTTCCTGCCGCTTGAA
GTCCTGCAAAGCGCCGCCGGCCACTACATCGGCACGCGCGACACCGAAGGCCCGGTTTCGCGGGAATCCCGCGAGTACTT
CCGCAGCTATGCCGCGGCCCAGCGTGCCCTCGAAAGAGGCGGCTGGTCCCAGCTCGCCATTCCCTGA

Upstream 100 bases:

>100_bases
TCGGTGCCCATCAATCGGGGCTGGGCCGGATACCGTTTTCCAACTGACGCAGAGCGGCCCGCACACGAAGCTGCCCGCAT
GTTCGCTGATTCGTCAGCAC

Downstream 100 bases:

>100_bases
TCCAACTGGAGGAATCACGTCATGAACCAGCTTCTACCACGGGAAGTCGTCGATCAGATCATGCGGGAAGAACAGCATTT
CGCGGCCGCGCCCCAAGCTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 128; Mature: 127

Protein sequence:

>128_residues
MPAARVPGCRGSLPRCPPVRIASGLRTRVPVTSMLFINRVRELPSREGRGPAFPRSPSMSQQASFGQLALTYCGKFLPLE
VLQSAAGHYIGTRDTEGPVSRESREYFRSYAAAQRALERGGWSQLAIP

Sequences:

>Translated_128_residues
MPAARVPGCRGSLPRCPPVRIASGLRTRVPVTSMLFINRVRELPSREGRGPAFPRSPSMSQQASFGQLALTYCGKFLPLE
VLQSAAGHYIGTRDTEGPVSRESREYFRSYAAAQRALERGGWSQLAIP
>Mature_127_residues
PAARVPGCRGSLPRCPPVRIASGLRTRVPVTSMLFINRVRELPSREGRGPAFPRSPSMSQQASFGQLALTYCGKFLPLEV
LQSAAGHYIGTRDTEGPVSRESREYFRSYAAAQRALERGGWSQLAIP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14018; Mature: 13887

Theoretical pI: Translated: 11.44; Mature: 11.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPAARVPGCRGSLPRCPPVRIASGLRTRVPVTSMLFINRVRELPSREGRGPAFPRSPSMS
CCCCCCCCCCCCCCCCCHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
QQASFGQLALTYCGKFLPLEVLQSAAGHYIGTRDTEGPVSRESREYFRSYAAAQRALERG
CHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHC
GWSQLAIP
CCCCCCCC
>Mature Secondary Structure 
PAARVPGCRGSLPRCPPVRIASGLRTRVPVTSMLFINRVRELPSREGRGPAFPRSPSMS
CCCCCCCCCCCCCCCCHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
QQASFGQLALTYCGKFLPLEVLQSAAGHYIGTRDTEGPVSRESREYFRSYAAAQRALERG
CHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHC
GWSQLAIP
CCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA