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The map label for this gene is 78047935

Identifier: 78047935

GI number: 78047935

Start: 2706939

End: 2707529

Strand: Reverse

Name: 78047935

Synonym: XCV2379

Alternate gene names: NA

Gene position: 2707529-2706939 (Counterclockwise)

Preceding gene: 78047936

Following gene: 78047934

Centisome position: 52.28

GC content: 72.08

Gene sequence:

>591_bases
ATGGCAGCGCCAGCCGTAGCCGTCCCCCTGCGCGCACTGATGCTCGTCGCTGGCTTGTGCGCCTGCGTAGCCCAGGCCCA
GGAGGTTCCGCCACCGGCCTACCAGCTTGCCGCCCAGCGAGCAGGCATCCCTTCGACGGTGCTCTACGCCGTGGCCTTGC
AGGAGAGCGGCATCCGCCGCAACGGTCGCACCGTCCCGTGGCCGTGGTCCCTCAACGTCGCCGGCCAGTCGCGCCGCTTT
GCCACGCGCGCCGATGCCTGCGCAGGTCTCCAGCAGGCGATGCGCTCCACGCCGCACACGCGCATCGACGCGGGCCTGGG
CCAGATCAACCTCGGCTATCACCAGCGGCGCTACGCCAATGCGTGCGACTTGCTCGACCCGTACCGCAACCTCGCCACCG
CTGCCGAGATCCTGAAGGAACAGCACGCCCCCGGCGAGGACTGGTTGCTGGCGATCGGCCGCTACCACCGCCCCGCGGGC
GGTGAACCCGCTGCCCGCTATCGCCGTAGCGTGTCCCGCCACCTTGCCCGTGTGCAGGGCGCGCGCCCAGCCGCCGCGGC
CCTCGCCGCGCGCCAGGAGACATCCCCATGA

Upstream 100 bases:

>100_bases
TGCGCGGCGGCACCATCACGCTGAACCATGACGGCGGCCGCTGGCTGTCGCTGGGCCTGCCCGGCGACTTGCCCGCGGTC
GTGCGCGAGGTGAACGGCCA

Downstream 100 bases:

>100_bases
CGACATCCCATCTGGCCTTTCGGGGTCTGCTCGTACTGCTGGCGGGCCTGCCGCTGGCCTCGCGTGCCGGCGAGCCGCTG
ATCGTGGTCGAAGACCGGGG

Product: putative lytic transglycosylase precursor

Products: NA

Alternate protein names: Transglycosylase Slt Family; Transglycosylase SLT Domain-Containing Protein; Signal Peptide; Lytic Transglycosylase; Phage Transglycosylase; Slt Family Transglycosylase; Transglycosylase SLT Domain; Transglycosylase SLT Domain-Containing; Lytic Murein Transglycosylase Family Protein; Soluble Lytic Murein Transglycosylase

Number of amino acids: Translated: 196; Mature: 195

Protein sequence:

>196_residues
MAAPAVAVPLRALMLVAGLCACVAQAQEVPPPAYQLAAQRAGIPSTVLYAVALQESGIRRNGRTVPWPWSLNVAGQSRRF
ATRADACAGLQQAMRSTPHTRIDAGLGQINLGYHQRRYANACDLLDPYRNLATAAEILKEQHAPGEDWLLAIGRYHRPAG
GEPAARYRRSVSRHLARVQGARPAAAALAARQETSP

Sequences:

>Translated_196_residues
MAAPAVAVPLRALMLVAGLCACVAQAQEVPPPAYQLAAQRAGIPSTVLYAVALQESGIRRNGRTVPWPWSLNVAGQSRRF
ATRADACAGLQQAMRSTPHTRIDAGLGQINLGYHQRRYANACDLLDPYRNLATAAEILKEQHAPGEDWLLAIGRYHRPAG
GEPAARYRRSVSRHLARVQGARPAAAALAARQETSP
>Mature_195_residues
AAPAVAVPLRALMLVAGLCACVAQAQEVPPPAYQLAAQRAGIPSTVLYAVALQESGIRRNGRTVPWPWSLNVAGQSRRFA
TRADACAGLQQAMRSTPHTRIDAGLGQINLGYHQRRYANACDLLDPYRNLATAAEILKEQHAPGEDWLLAIGRYHRPAGG
EPAARYRRSVSRHLARVQGARPAAAALAARQETSP

Specific function: Unknown

COG id: COG0741

COG function: function code M; Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21060; Mature: 20929

Theoretical pI: Translated: 10.62; Mature: 10.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAAPAVAVPLRALMLVAGLCACVAQAQEVPPPAYQLAAQRAGIPSTVLYAVALQESGIRR
CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHCCCCC
NGRTVPWPWSLNVAGQSRRFATRADACAGLQQAMRSTPHTRIDAGLGQINLGYHQRRYAN
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCCCCCCHHHHHHHH
ACDLLDPYRNLATAAEILKEQHAPGEDWLLAIGRYHRPAGGEPAARYRRSVSRHLARVQG
HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCC
ARPAAAALAARQETSP
CCHHHHHHHHHHCCCC
>Mature Secondary Structure 
AAPAVAVPLRALMLVAGLCACVAQAQEVPPPAYQLAAQRAGIPSTVLYAVALQESGIRR
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHCCCCC
NGRTVPWPWSLNVAGQSRRFATRADACAGLQQAMRSTPHTRIDAGLGQINLGYHQRRYAN
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCCCCCCHHHHHHHH
ACDLLDPYRNLATAAEILKEQHAPGEDWLLAIGRYHRPAGGEPAARYRRSVSRHLARVQG
HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCC
ARPAAAALAARQETSP
CCHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA