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The map label for this gene is virG [H]

Identifier: 78047703

GI number: 78047703

Start: 2464905

End: 2465684

Strand: Reverse

Name: virG [H]

Synonym: XCV2147

Alternate gene names: 78047703

Gene position: 2465684-2464905 (Counterclockwise)

Preceding gene: 78047704

Following gene: 78047702

Centisome position: 47.61

GC content: 65.0

Gene sequence:

>780_bases
ATGATCAAGCTGCATTCCAACTCCCCCTCCTCCTCTGACGTATCCGTTGCACGTCCCGCACCCGCCGCCAAGGTGCTGGT
GGTGGACGACGACCAGGCGATGGCACACGTCGTCATGGGCCACATCCGCTCCCACGGCATGGAAGCCTTTGTCGCCACCA
GCAGCAGCGAGGTTGCCGAGGCCTTGCGTCGGCGCGAACCGGATATCCTGCTGCTGGATCTGATGCTCAAGCACGAAGAC
GGTCTGGACTTGTTGCGCGCCTTGCGCAAGGAATCCGACATTCCGGTGATCATCATGACCGGCCATCGCCGCGACGAAAT
CGATCGCGTGGTAGGGCTTGAGCTGGGCGCCGACGACTACCTGCCCAAGCCGTTCGGGCTGCATGAACTGACCGCACGGA
TCCGCGCCGTGCTGCGTCGCCATATCGCCTCCAAGGTGGCGGTGGCGCGTGATGCGGGCGAAGGCCGGGTGCGCTTCGCT
GCCTGGGAATTCGATTTGCAGGCCCGCACGGTGTCGCGCGCGGGTACGCCCGCCATTCCGCTGACCAAGGGCGAATACGC
GCTGTTGCGCGCCTTTGTCGATGCGCCTGGACGAGCGCTGAGCCGAGAGCACCTGATGCGTGCCACGCGTCTGCATGAGG
ACGTGTTCGATCGCAGTATCGACGTGCAGATCCTGCGCCTGCGACGCAAGCTGGAACAGGATCCGCGCGAGCCGACGCTG
ATCGTGACCCAGCGCGGCGCCGGTTATGTCTTCACGCCGCCGGTCGAGCACGCTCGATGA

Upstream 100 bases:

>100_bases
GCGCATGGACGCACTTCCCCAACGCGGTCGATTCGGTCACCCCAGCCGATCGACACTCGGAATCTGTCCGCGAACGCGGT
CATGCCGGGATAGAGAGTCG

Downstream 100 bases:

>100_bases
CACAGCCGCCGGCGCGAGCCAGGCCAGACCATCGCGAATGGCGTTGGTCGCCGGCGCCGATCCTTAAAGTCGCGCTCGCT
TCTGCAGCGTTGCTCGTCAT

Product: VirG-like two-component system regulatory protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 259; Mature: 259

Protein sequence:

>259_residues
MIKLHSNSPSSSDVSVARPAPAAKVLVVDDDQAMAHVVMGHIRSHGMEAFVATSSSEVAEALRRREPDILLLDLMLKHED
GLDLLRALRKESDIPVIIMTGHRRDEIDRVVGLELGADDYLPKPFGLHELTARIRAVLRRHIASKVAVARDAGEGRVRFA
AWEFDLQARTVSRAGTPAIPLTKGEYALLRAFVDAPGRALSREHLMRATRLHEDVFDRSIDVQILRLRRKLEQDPREPTL
IVTQRGAGYVFTPPVEHAR

Sequences:

>Translated_259_residues
MIKLHSNSPSSSDVSVARPAPAAKVLVVDDDQAMAHVVMGHIRSHGMEAFVATSSSEVAEALRRREPDILLLDLMLKHED
GLDLLRALRKESDIPVIIMTGHRRDEIDRVVGLELGADDYLPKPFGLHELTARIRAVLRRHIASKVAVARDAGEGRVRFA
AWEFDLQARTVSRAGTPAIPLTKGEYALLRAFVDAPGRALSREHLMRATRLHEDVFDRSIDVQILRLRRKLEQDPREPTL
IVTQRGAGYVFTPPVEHAR
>Mature_259_residues
MIKLHSNSPSSSDVSVARPAPAAKVLVVDDDQAMAHVVMGHIRSHGMEAFVATSSSEVAEALRRREPDILLLDLMLKHED
GLDLLRALRKESDIPVIIMTGHRRDEIDRVVGLELGADDYLPKPFGLHELTARIRAVLRRHIASKVAVARDAGEGRVRFA
AWEFDLQARTVSRAGTPAIPLTKGEYALLRAFVDAPGRALSREHLMRATRLHEDVFDRSIDVQILRLRRKLEQDPREPTL
IVTQRGAGYVFTPPVEHAR

Specific function: VirG is required for the positive regulation of at least two vir loci encoded by the Ti plasmid of A.tumefaciens [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1789809, Length=231, Percent_Identity=43.7229437229437, Blast_Score=174, Evalue=5e-45,
Organism=Escherichia coli, GI1787229, Length=237, Percent_Identity=38.8185654008439, Blast_Score=141, Evalue=5e-35,
Organism=Escherichia coli, GI1788394, Length=235, Percent_Identity=34.8936170212766, Blast_Score=132, Evalue=2e-32,
Organism=Escherichia coli, GI1790863, Length=234, Percent_Identity=31.6239316239316, Blast_Score=131, Evalue=4e-32,
Organism=Escherichia coli, GI1786911, Length=230, Percent_Identity=35.6521739130435, Blast_Score=129, Evalue=3e-31,
Organism=Escherichia coli, GI2367329, Length=231, Percent_Identity=39.8268398268398, Blast_Score=119, Evalue=2e-28,
Organism=Escherichia coli, GI1790860, Length=227, Percent_Identity=33.920704845815, Blast_Score=118, Evalue=4e-28,
Organism=Escherichia coli, GI1786599, Length=237, Percent_Identity=36.2869198312236, Blast_Score=117, Evalue=5e-28,
Organism=Escherichia coli, GI1786784, Length=235, Percent_Identity=35.3191489361702, Blast_Score=112, Evalue=2e-26,
Organism=Escherichia coli, GI1787375, Length=235, Percent_Identity=34.0425531914894, Blast_Score=104, Evalue=5e-24,
Organism=Escherichia coli, GI145693140, Length=238, Percent_Identity=28.9915966386555, Blast_Score=99, Evalue=3e-22,
Organism=Escherichia coli, GI1790552, Length=243, Percent_Identity=32.5102880658436, Blast_Score=98, Evalue=6e-22,
Organism=Escherichia coli, GI87082012, Length=235, Percent_Identity=34.0425531914894, Blast_Score=96, Evalue=2e-21,
Organism=Escherichia coli, GI1789402, Length=231, Percent_Identity=32.9004329004329, Blast_Score=92, Evalue=4e-20,
Organism=Escherichia coli, GI1790299, Length=112, Percent_Identity=38.3928571428571, Blast_Score=69, Evalue=3e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR001867
- InterPro:   IPR016032
- InterPro:   IPR001789
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00072 Response_reg; PF00486 Trans_reg_C [H]

EC number: NA

Molecular weight: Translated: 28911; Mature: 28911

Theoretical pI: Translated: 9.54; Mature: 9.54

Prosite motif: PS50110 RESPONSE_REGULATORY

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKLHSNSPSSSDVSVARPAPAAKVLVVDDDQAMAHVVMGHIRSHGMEAFVATSSSEVAE
CEEECCCCCCCCCCEEECCCCCEEEEEEECCHHHHHHHHHHHHHCCCEEEEECCCHHHHH
ALRRREPDILLLDLMLKHEDGLDLLRALRKESDIPVIIMTGHRRDEIDRVVGLELGADDY
HHHHCCCCEEEEEEHHCCCCCHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHCEECCCCC
LPKPFGLHELTARIRAVLRRHIASKVAVARDAGEGRVRFAAWEFDLQARTVSRAGTPAIP
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEHHHHHHHCCCCCCCC
LTKGEYALLRAFVDAPGRALSREHLMRATRLHEDVFDRSIDVQILRLRRKLEQDPREPTL
CCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCEE
IVTQRGAGYVFTPPVEHAR
EEEECCCCEEECCCCCCCC
>Mature Secondary Structure
MIKLHSNSPSSSDVSVARPAPAAKVLVVDDDQAMAHVVMGHIRSHGMEAFVATSSSEVAE
CEEECCCCCCCCCCEEECCCCCEEEEEEECCHHHHHHHHHHHHHCCCEEEEECCCHHHHH
ALRRREPDILLLDLMLKHEDGLDLLRALRKESDIPVIIMTGHRRDEIDRVVGLELGADDY
HHHHCCCCEEEEEEHHCCCCCHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHCEECCCCC
LPKPFGLHELTARIRAVLRRHIASKVAVARDAGEGRVRFAAWEFDLQARTVSRAGTPAIP
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEHHHHHHHCCCCCCCC
LTKGEYALLRAFVDAPGRALSREHLMRATRLHEDVFDRSIDVQILRLRRKLEQDPREPTL
CCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCEE
IVTQRGAGYVFTPPVEHAR
EEEECCCCEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 3448462; 2194232; 7601840; 11743193; 11743194 [H]