| Definition | Xanthomonas campestris pv. vesicatoria str. 85-10 chromosome, complete genome. |
|---|---|
| Accession | NC_007508 |
| Length | 5,178,466 |
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The map label for this gene is ccp [H]
Identifier: 78047702
GI number: 78047702
Start: 2463916
End: 2464908
Strand: Reverse
Name: ccp [H]
Synonym: XCV2146
Alternate gene names: 78047702
Gene position: 2464908-2463916 (Counterclockwise)
Preceding gene: 78047703
Following gene: 78047701
Centisome position: 47.6
GC content: 66.06
Gene sequence:
>993_bases ATGACACAGCCGCCGGCGCGAGCCAGGCCAGACCATCGCGAATGGCGTTGGTCGCCGGCGCCGATCCTTAAAGTCGCGCT CGCTTCTGCAGCGTTGCTCGTCATGCAGCTCGTGCCGGCAGCTGAAATTGCAGCTCCGTCGGTGCGCACACGCGAGCCCA TCCACGCCATCCAGCAAGCGACCGGCCTGGATAGCCGCAAGGTCGCACTCGGCGCGCTGCTGTTCAATGATCGCCGGCTG TCGGGCGACAATCGCGTTGCCTGCACCTCATGTCATCACCTGGCCAGCAACGGTGCTGCCGCCGATGCGATGACCCGAAT GCCCGGGCGCGCGACGCCAGCGTTCAACACACCGACCGTCTTCAATGCCACCGCAAATTTTCGCCTGGGCTGGCGCGGCA ATTTCCGCAGCCAGGAAGCGCAAACGGCGTCGTTGCTGGAAAACCCCAGCGTCATGCGCGCCGATATCGCGACGGTGGTA GGACGACTGCAACAAGACACGGTGCTCAATCAGCGCTTTCGCGCGGCCTATGGCAGGCCACCGGATCGGGCCGCGCTGTT CGATGCCATCGCCGCCTACGAACGCTCGCTGGTCACGCCGGGCAGTCGCTTCGATCTCTGGCTGCAAGGCAGCGACGCTG CGCTCAACGCGCAGGAGTTGCGCGGCTACACCACCTTCAAGTCGATCGGCTGCATCTCCTGCCACCAGGGCGTCAACGTG GGCGGCAACCTGTTCCAGCGCAGCGGCATCTTCGCTCCCGCCGCACGGCATGGCACCCCGATCCTGCGGGTTCCCAGCCT GCGCAATGTCGCGACCACCGCGCCCTACTTCCACGACGGCAGCGCGACCACCCTGCCCCAGGCAATCAAGGCCATGGGTA CGGCGCAACTGGGCGTCACACTGAGCCCGGCGGATGTGGCCGACATTGCCGCATTTCTGCAGACATTGACCGGCAAGCAC CAAGGCCGGCAGTTGACGGCGCCGGCGCCGTGA
Upstream 100 bases:
>100_bases GCCTGCGACGCAAGCTGGAACAGGATCCGCGCGAGCCGACGCTGATCGTGACCCAGCGCGGCGCCGGTTATGTCTTCACG CCGCCGGTCGAGCACGCTCG
Downstream 100 bases:
>100_bases GGTGGGCGACGATCTTCAGCGCCGTGCTGCTGGCGGGGCTGATCTTCTTCAGCCTGTGCATGGCGGCGCTGGATCGCGAC ACGCAGCGTTACGGTCATGC
Product: putative cytochrome C peroxidase
Products: NA
Alternate protein names: Cytochrome c peroxidase [H]
Number of amino acids: Translated: 330; Mature: 329
Protein sequence:
>330_residues MTQPPARARPDHREWRWSPAPILKVALASAALLVMQLVPAAEIAAPSVRTREPIHAIQQATGLDSRKVALGALLFNDRRL SGDNRVACTSCHHLASNGAAADAMTRMPGRATPAFNTPTVFNATANFRLGWRGNFRSQEAQTASLLENPSVMRADIATVV GRLQQDTVLNQRFRAAYGRPPDRAALFDAIAAYERSLVTPGSRFDLWLQGSDAALNAQELRGYTTFKSIGCISCHQGVNV GGNLFQRSGIFAPAARHGTPILRVPSLRNVATTAPYFHDGSATTLPQAIKAMGTAQLGVTLSPADVADIAAFLQTLTGKH QGRQLTAPAP
Sequences:
>Translated_330_residues MTQPPARARPDHREWRWSPAPILKVALASAALLVMQLVPAAEIAAPSVRTREPIHAIQQATGLDSRKVALGALLFNDRRL SGDNRVACTSCHHLASNGAAADAMTRMPGRATPAFNTPTVFNATANFRLGWRGNFRSQEAQTASLLENPSVMRADIATVV GRLQQDTVLNQRFRAAYGRPPDRAALFDAIAAYERSLVTPGSRFDLWLQGSDAALNAQELRGYTTFKSIGCISCHQGVNV GGNLFQRSGIFAPAARHGTPILRVPSLRNVATTAPYFHDGSATTLPQAIKAMGTAQLGVTLSPADVADIAAFLQTLTGKH QGRQLTAPAP >Mature_329_residues TQPPARARPDHREWRWSPAPILKVALASAALLVMQLVPAAEIAAPSVRTREPIHAIQQATGLDSRKVALGALLFNDRRLS GDNRVACTSCHHLASNGAAADAMTRMPGRATPAFNTPTVFNATANFRLGWRGNFRSQEAQTASLLENPSVMRADIATVVG RLQQDTVLNQRFRAAYGRPPDRAALFDAIAAYERSLVTPGSRFDLWLQGSDAALNAQELRGYTTFKSIGCISCHQGVNVG GNLFQRSGIFAPAARHGTPILRVPSLRNVATTAPYFHDGSATTLPQAIKAMGTAQLGVTLSPADVADIAAFLQTLTGKHQ GRQLTAPAP
Specific function: Unknown
COG id: COG1858
COG function: function code P; Cytochrome c peroxidase
Gene ontology:
Cell location: Periplasm (Probable) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1789935, Length=299, Percent_Identity=36.1204013377926, Blast_Score=175, Evalue=5e-45,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009056 - InterPro: IPR003088 - InterPro: IPR004852 [H]
Pfam domain/function: PF03150 CCP_MauG; PF00034 Cytochrom_C [H]
EC number: =1.11.1.5 [H]
Molecular weight: Translated: 35318; Mature: 35186
Theoretical pI: Translated: 11.09; Mature: 11.09
Prosite motif: PS51007 CYTC
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQPPARARPDHREWRWSPAPILKVALASAALLVMQLVPAAEIAAPSVRTREPIHAIQQA CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCHHHHCCCCCCCCHHHHHHHHH TGLDSRKVALGALLFNDRRLSGDNRVACTSCHHLASNGAAADAMTRMPGRATPAFNTPTV HCCCCHHHHHHHEEECCCEECCCCCEEEHHHHHHHCCCCHHHHHHHCCCCCCCCCCCCEE FNATANFRLGWRGNFRSQEAQTASLLENPSVMRADIATVVGRLQQDTVLNQRFRAAYGRP EECCCCEEEECCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC PDRAALFDAIAAYERSLVTPGSRFDLWLQGSDAALNAQELRGYTTFKSIGCISCHQGVNV CHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCHHHHCCHHHHHHCCCEECCCCCCC GGNLFQRSGIFAPAARHGTPILRVPSLRNVATTAPYFHDGSATTLPQAIKAMGTAQLGVT CCHHHHHCCCCCCHHHCCCCEEECCCCCCHHHCCCEEECCCCHHHHHHHHHHCCHHCCEE LSPADVADIAAFLQTLTGKHQGRQLTAPAP ECCHHHHHHHHHHHHHHCCCCCCEECCCCC >Mature Secondary Structure TQPPARARPDHREWRWSPAPILKVALASAALLVMQLVPAAEIAAPSVRTREPIHAIQQA CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCHHHHCCCCCCCCHHHHHHHHH TGLDSRKVALGALLFNDRRLSGDNRVACTSCHHLASNGAAADAMTRMPGRATPAFNTPTV HCCCCHHHHHHHEEECCCEECCCCCEEEHHHHHHHCCCCHHHHHHHCCCCCCCCCCCCEE FNATANFRLGWRGNFRSQEAQTASLLENPSVMRADIATVVGRLQQDTVLNQRFRAAYGRP EECCCCEEEECCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC PDRAALFDAIAAYERSLVTPGSRFDLWLQGSDAALNAQELRGYTTFKSIGCISCHQGVNV CHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCHHHHCCHHHHHHCCCEECCCCCCC GGNLFQRSGIFAPAARHGTPILRVPSLRNVATTAPYFHDGSATTLPQAIKAMGTAQLGVT CCHHHHHCCCCCCHHHCCCCEEECCCCCCHHHCCCEEECCCCHHHHHHHHHHCCHHCCEE LSPADVADIAAFLQTLTGKHQGRQLTAPAP ECCHHHHHHHHHHHHHHCCCCCCEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12700255; 8163487 [H]