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The map label for this gene is 78047699

Identifier: 78047699

GI number: 78047699

Start: 2459341

End: 2460369

Strand: Reverse

Name: 78047699

Synonym: XCV2143

Alternate gene names: NA

Gene position: 2460369-2459341 (Counterclockwise)

Preceding gene: 78047700

Following gene: 78047675

Centisome position: 47.51

GC content: 69.1

Gene sequence:

>1029_bases
ATGCAGATCGACAGCGAACAGCTACTGCAGCCGGTGGACGCACAGGCGCCGTCCGGTCCGAACCTGGAATACACCCCGGA
GTTCCAGAGCCTGGAAGAACTGGCACGCCCGCGTCAGGAACGCGCACTGGGCGCGGGCGTGCTGGTGCCCGAGGCGCCGG
AGTGGCGTCAGGTCGCCGACAGCGCCGAGCACTTGTTGCTGCGCTCCAAGGACTTGCGACTGGGCATCTTGCTGAGCATT
GCCCGCCTGCACCAGGACGGCCTGGTGGGCTGGTCCAGCGGCGTCAGCCTGCTCCGGCACCTGCTGGAGCGGTTCTGGGA
CGACGTCCATCCTGGTCTGGATGCCGATGAGGACAACGACCCGACCGAACGCGTCAACGCCATCGCGGCGCTGGCCGACA
GCGAGCGCACGCTGACGCAGCTGCGCAACGTCCGCCTGTTCAAGGGACTGCATCCTGGGCACTTTTCGCTGCGCGATCTG
CGCATCGTGCAGGGCACGCTCAAGCGCGCTGCGGACGATCCCAGCGAAGCGCCAGAGCCGGCCGCCATCGATGCCTGCCT
GCGCGACTGTCCGCTGGAGGCGCTGCTGGAGCTGGATGCGGCCCTGGCCGCTGCGCAGGGCGATATCGCCGCGATGGCCG
GCCTGTTCGCCGAGCGCACCCCGGGATATGGACCGGAGCTGGCGCCGTTGACGCACGACCTGGGCGAGTTGCGCGCGTTC
CTGCGGCCTTATGTCGCCGAGCGTTTCGGCTCCACGGCCGACCCAGCCGAGCATGCAGCATCCGTCGCCGACGGCGCCAA
TGCACCCGCACCGCGGGCGCACGCCCTGGAGCATCCGGACGACGTTCGCCGCATGCTCGATCAGCTGTGCGATTACTACG
CGCGGCGCGAGCCTTCCAGCCCGGTGCCGTTGTTGTTGCGGCGCGCGCAACGGCTGGTCGGCCTGGATTTTGCCGCGCTG
ATGCGCGACCTGGCGCCACGCGGGATCGACGAGCTGCAGGTGGTGTCGGGCCAGGACCATTCCGATTAG

Upstream 100 bases:

>100_bases
GCGTGCTGGAACTGCTGGTTCCAGCAGCGCCCGCCGCGCCGGCAGCGCGACGCGCCGCCGGCCGTGGCGACCTCGTGCTG
TCCGTCTCGTGAGCGGCGCC

Downstream 100 bases:

>100_bases
CGGCTGACAGAACCACCGCACCGCCGCCGGGCGGGCGTGGACGACGCTCTGGATCCTGATGCAGTACGTCTGCACTGTGG
TTTTTGTGTGCCATCCACGC

Product: hypothetical protein

Products: NA

Alternate protein names: ImpA Domain-Containing Protein; Cytoplasmic Protein; ImpA Family Type VI Secretion-Associated Protein; ImpA-Like; Replication/Virulence Associated Protein; Type VI Secretion-Associated Protein; ImpA-Related N-Terminal Family Protein; Type VI Secretion System Protein TssA; ImpA Domain Protein; Type VI Secretion System Core Protein; ImpA-Related N-Terminal Domain-Containing; Conserved Protein; Type VI Secretion System Protein ImpA; T6ss A; ImpA-Like Protein

Number of amino acids: Translated: 342; Mature: 342

Protein sequence:

>342_residues
MQIDSEQLLQPVDAQAPSGPNLEYTPEFQSLEELARPRQERALGAGVLVPEAPEWRQVADSAEHLLLRSKDLRLGILLSI
ARLHQDGLVGWSSGVSLLRHLLERFWDDVHPGLDADEDNDPTERVNAIAALADSERTLTQLRNVRLFKGLHPGHFSLRDL
RIVQGTLKRAADDPSEAPEPAAIDACLRDCPLEALLELDAALAAAQGDIAAMAGLFAERTPGYGPELAPLTHDLGELRAF
LRPYVAERFGSTADPAEHAASVADGANAPAPRAHALEHPDDVRRMLDQLCDYYARREPSSPVPLLLRRAQRLVGLDFAAL
MRDLAPRGIDELQVVSGQDHSD

Sequences:

>Translated_342_residues
MQIDSEQLLQPVDAQAPSGPNLEYTPEFQSLEELARPRQERALGAGVLVPEAPEWRQVADSAEHLLLRSKDLRLGILLSI
ARLHQDGLVGWSSGVSLLRHLLERFWDDVHPGLDADEDNDPTERVNAIAALADSERTLTQLRNVRLFKGLHPGHFSLRDL
RIVQGTLKRAADDPSEAPEPAAIDACLRDCPLEALLELDAALAAAQGDIAAMAGLFAERTPGYGPELAPLTHDLGELRAF
LRPYVAERFGSTADPAEHAASVADGANAPAPRAHALEHPDDVRRMLDQLCDYYARREPSSPVPLLLRRAQRLVGLDFAAL
MRDLAPRGIDELQVVSGQDHSD
>Mature_342_residues
MQIDSEQLLQPVDAQAPSGPNLEYTPEFQSLEELARPRQERALGAGVLVPEAPEWRQVADSAEHLLLRSKDLRLGILLSI
ARLHQDGLVGWSSGVSLLRHLLERFWDDVHPGLDADEDNDPTERVNAIAALADSERTLTQLRNVRLFKGLHPGHFSLRDL
RIVQGTLKRAADDPSEAPEPAAIDACLRDCPLEALLELDAALAAAQGDIAAMAGLFAERTPGYGPELAPLTHDLGELRAF
LRPYVAERFGSTADPAEHAASVADGANAPAPRAHALEHPDDVRRMLDQLCDYYARREPSSPVPLLLRRAQRLVGLDFAAL
MRDLAPRGIDELQVVSGQDHSD

Specific function: Unknown

COG id: COG3515

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 37413; Mature: 37413

Theoretical pI: Translated: 4.61; Mature: 4.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQIDSEQLLQPVDAQAPSGPNLEYTPEFQSLEELARPRQERALGAGVLVPEAPEWRQVAD
CCCCHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHH
SAEHLLLRSKDLRLGILLSIARLHQDGLVGWSSGVSLLRHLLERFWDDVHPGLDADEDND
HHHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
PTERVNAIAALADSERTLTQLRNVRLFKGLHPGHFSLRDLRIVQGTLKRAADDPSEAPEP
HHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCH
AAIDACLRDCPLEALLELDAALAAAQGDIAAMAGLFAERTPGYGPELAPLTHDLGELRAF
HHHHHHHHHCCHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHH
LRPYVAERFGSTADPAEHAASVADGANAPAPRAHALEHPDDVRRMLDQLCDYYARREPSS
HHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCC
PVPLLLRRAQRLVGLDFAALMRDLAPRGIDELQVVSGQDHSD
CHHHHHHHHHHHHCCCHHHHHHHHCCCCCCHHHHCCCCCCCC
>Mature Secondary Structure
MQIDSEQLLQPVDAQAPSGPNLEYTPEFQSLEELARPRQERALGAGVLVPEAPEWRQVAD
CCCCHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHH
SAEHLLLRSKDLRLGILLSIARLHQDGLVGWSSGVSLLRHLLERFWDDVHPGLDADEDND
HHHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
PTERVNAIAALADSERTLTQLRNVRLFKGLHPGHFSLRDLRIVQGTLKRAADDPSEAPEP
HHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCH
AAIDACLRDCPLEALLELDAALAAAQGDIAAMAGLFAERTPGYGPELAPLTHDLGELRAF
HHHHHHHHHCCHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHH
LRPYVAERFGSTADPAEHAASVADGANAPAPRAHALEHPDDVRRMLDQLCDYYARREPSS
HHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCC
PVPLLLRRAQRLVGLDFAALMRDLAPRGIDELQVVSGQDHSD
CHHHHHHHHHHHHCCCHHHHHHHHCCCCCCHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA