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The map label for this gene is flgH [H]

Identifier: 78047583

GI number: 78047583

Start: 2309627

End: 2310319

Strand: Reverse

Name: flgH [H]

Synonym: XCV2027

Alternate gene names: 78047583

Gene position: 2310319-2309627 (Counterclockwise)

Preceding gene: 78047584

Following gene: 78047582

Centisome position: 44.61

GC content: 67.39

Gene sequence:

>693_bases
ATGTCACGCCTGCCTTCTCTCTCCCGCCTGTGCCTCGCCATTGCCTGCAGCGCGCTGCTGGGTGGCTGCGTGGCCGCCGG
CGATGTACGTCCGTTCGCCGAACTGGCGCCGATCGTGCCGGTGGTGGCACCGGTGGCGCAGCCGACGGCCGGTGCGATCT
ACGCCGCCGGCCCCAGCCTGAACCTGTATGGCGATCGCCGTGCCCGCGATGTCGGCGATCTGCTGACGGTGAACCTGGTC
GAAAGCACTACCGCCTCGTCCACCGCCAACACCAGCATCAGCAAGAAGGACGCCACTACCATGGGCGCGCCGACGCTGCT
GGGCGCACCGCTCACCGTGGGTGGCTTGAATGTGCTGGAAAACAGCACCAGCGGCGACCGCAGCTTTGCCGGCAAGGGCA
ACACCGCACAGAGCAACCGCATGCAGGGCAGCGTCACCGTCACCGTGATGCAACGCCTGCCCAACGGCAACCTGGTGATC
CAGGGGCAGAAGAACCTGCGCCTGACCCAGGGCGACGAACTAGTGCAGGTGCAAGGCATCGTGCGCGCCGCCGACATCGC
CCCGGACAACACCGTGCCCTCCAGCAAGGTCGCCGACGCCCGCATCGCTTACGGCGGCCGCGGCGCGATCGCGCAGTCCA
ATGCAATGGGCTGGCTGAGCCGCTTCTTCAATTCCCGTCTGTCGCCCTACTGA

Upstream 100 bases:

>100_bases
TGAATGCCAAGGCCATCTCCACCACCGACTCGATGCTCGGTTACTTGAACAACAACGTCTGATCGGCTCGCCGCTCCTCG
CCCTCTCAGGAATCAACGCC

Downstream 100 bases:

>100_bases
GCCTGCGACCATGAACCTGTCTTCCCTGCCCTTCCGTCTGCTGGCTGCCGCCGTCGCGCTGTGCGCGATTGCCGCGCCGG
CCAGCGCCGAGCGCATCAAG

Product: flagellar basal body L-ring protein

Products: NA

Alternate protein names: Basal body L-ring protein [H]

Number of amino acids: Translated: 230; Mature: 229

Protein sequence:

>230_residues
MSRLPSLSRLCLAIACSALLGGCVAAGDVRPFAELAPIVPVVAPVAQPTAGAIYAAGPSLNLYGDRRARDVGDLLTVNLV
ESTTASSTANTSISKKDATTMGAPTLLGAPLTVGGLNVLENSTSGDRSFAGKGNTAQSNRMQGSVTVTVMQRLPNGNLVI
QGQKNLRLTQGDELVQVQGIVRAADIAPDNTVPSSKVADARIAYGGRGAIAQSNAMGWLSRFFNSRLSPY

Sequences:

>Translated_230_residues
MSRLPSLSRLCLAIACSALLGGCVAAGDVRPFAELAPIVPVVAPVAQPTAGAIYAAGPSLNLYGDRRARDVGDLLTVNLV
ESTTASSTANTSISKKDATTMGAPTLLGAPLTVGGLNVLENSTSGDRSFAGKGNTAQSNRMQGSVTVTVMQRLPNGNLVI
QGQKNLRLTQGDELVQVQGIVRAADIAPDNTVPSSKVADARIAYGGRGAIAQSNAMGWLSRFFNSRLSPY
>Mature_229_residues
SRLPSLSRLCLAIACSALLGGCVAAGDVRPFAELAPIVPVVAPVAQPTAGAIYAAGPSLNLYGDRRARDVGDLLTVNLVE
STTASSTANTSISKKDATTMGAPTLLGAPLTVGGLNVLENSTSGDRSFAGKGNTAQSNRMQGSVTVTVMQRLPNGNLVIQ
GQKNLRLTQGDELVQVQGIVRAADIAPDNTVPSSKVADARIAYGGRGAIAQSNAMGWLSRFFNSRLSPY

Specific function: Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation [H]

COG id: COG2063

COG function: function code N; Flagellar basal body L-ring protein

Gene ontology:

Cell location: Cell outer membrane; Lipid-anchor (Probable). Bacterial flagellum basal body [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the flgH family [H]

Homologues:

Organism=Escherichia coli, GI1787319, Length=227, Percent_Identity=38.3259911894273, Blast_Score=118, Evalue=3e-28,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000527 [H]

Pfam domain/function: PF02107 FlgH [H]

EC number: NA

Molecular weight: Translated: 23697; Mature: 23566

Theoretical pI: Translated: 9.90; Mature: 9.90

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRLPSLSRLCLAIACSALLGGCVAAGDVRPFAELAPIVPVVAPVAQPTAGAIYAAGPSL
CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCEEEECCCCE
NLYGDRRARDVGDLLTVNLVESTTASSTANTSISKKDATTMGAPTLLGAPLTVGGLNVLE
EECCCCCHHHHHHEEEEEEHHCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCHHHHC
NSTSGDRSFAGKGNTAQSNRMQGSVTVTVMQRLPNGNLVIQGQKNLRLTQGDELVQVQGI
CCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCEEEECCCCEEEECCCCEEEHHHH
VRAADIAPDNTVPSSKVADARIAYGGRGAIAQSNAMGWLSRFFNSRLSPY
HHHHCCCCCCCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
SRLPSLSRLCLAIACSALLGGCVAAGDVRPFAELAPIVPVVAPVAQPTAGAIYAAGPSL
CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCEEEECCCCE
NLYGDRRARDVGDLLTVNLVESTTASSTANTSISKKDATTMGAPTLLGAPLTVGGLNVLE
EECCCCCHHHHHHEEEEEEHHCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCHHHHC
NSTSGDRSFAGKGNTAQSNRMQGSVTVTVMQRLPNGNLVIQGQKNLRLTQGDELVQVQGI
CCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCEEEECCCCEEEECCCCEEEHHHH
VRAADIAPDNTVPSSKVADARIAYGGRGAIAQSNAMGWLSRFFNSRLSPY
HHHHCCCCCCCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12024217 [H]