| Definition | Xanthomonas campestris pv. vesicatoria str. 85-10 chromosome, complete genome. |
|---|---|
| Accession | NC_007508 |
| Length | 5,178,466 |
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The map label for this gene is fabH [C]
Identifier: 78047567
GI number: 78047567
Start: 2292929
End: 2293969
Strand: Reverse
Name: fabH [C]
Synonym: XCV2011
Alternate gene names: 78047567
Gene position: 2293969-2292929 (Counterclockwise)
Preceding gene: 78047568
Following gene: 78047566
Centisome position: 44.3
GC content: 62.25
Gene sequence:
>1041_bases ATGCCGACCTCCACGCTGCATAACGTCCGCTTTGCCGGCATGGCGACATGCGTGCCAAAGCGTGTAGTGTCTAATCTCAC CGATTGCCGTCCGCAGATTCGCTCCGAACGCGAGCGTCTGGTGCGCAACATCGGCATCGAGACCCGGCGGATGGCGTCGG AATGGCAGTGTTTTTCCGACCTGGCCTTCGATGCGACCGAGGTGCTGCTGGAAAAGCTGCAGTGGAAGCGCGAGGAGATC GATGCATTGATCGTGGTGACCCAGTCGCCGGATTACCCGATTCCGGCCACCGCCATCATCCTGCAGGACAGGCTGGGGCT GTCGCATGCCACGGTCGCCTTCGACGTCAACCTGGGCTGCTCGGCCTACCCGTTTGGCATCAACCTGCTCGGCTCGATGA TCGCCGCCGGTGGCGTCAAGAAGGGCCTGCTGCTGGTCGGCGACCGCAGCGCCAACCTTGAAGACCCGATCTTCTCCGAC TCCGGCACCGCCACGGCGCTGGAGTTCAGCGCCGACGCGCCGCCGATGTATTTCGACCTCAACAGCGATGGCAGTGGCTA CAAGGCCATCATCCTGCCGGTGGGTGGTCACCGCGAACCGGTCGGCATCCAGCACTTGGTGCCGTATCGCGACGAGGCGG ATGGTGCCTGGAAGCGTGGCGTGGACCTGATCCTGGACGGCGTGGCAGTGCTGAGCTTCTCTACCCAGCGCATTCCACCT GCCGTGCAGAAACTGCTTGAGTACACCGGCGTGGCCAAGGAAGACATCGATTACTTCGTGTTTCACCAGGCCAACCGCAT GATCAACGAGACAATTCGCAAAAAGCTCGGCCTGCCGGTGGAAAAGGTGCCTTCGACACTGCGCGACTTCGGCAACACCA GCGGCGCCTCGCTGCCGGTGACCATGACCGCGCGCATTAATAAGGAACTGGAATCGGGCCGCAAGCGCGTGCTGCTATGC GGCTTCGGCATCGGGCTGTCGTGGGGCACCTGCCTGGTGGATATCGAGGGCGCGGTGTTTCCTGATTTGATCGAGTCATG A
Upstream 100 bases:
>100_bases TGATGTTCGACATGGAATACGGCAAGACCATCACCGGCGAAGATCTCGCCGTTGCCATCACCGTCGGCGATCTTTACAAA CTGACCGAGGCGTAAGCACC
Downstream 100 bases:
>100_bases CGGCCACACCTGCAGCAACCACTGATGCGTTCGGGCTGCAAAACAAGACCGTTCTAGTGACCGGCGCGTCGTCGGGCATT GGCGCTGCAGTCGCCACGTT
Product: 3-oxoacyl-[acyl-carrier protein] synthase III
Products: NA
Alternate protein names: 3-oxoacyl-[acyl-carrier-protein] synthase III; Beta-ketoacyl-ACP synthase III; KAS III [H]
Number of amino acids: Translated: 346; Mature: 345
Protein sequence:
>346_residues MPTSTLHNVRFAGMATCVPKRVVSNLTDCRPQIRSERERLVRNIGIETRRMASEWQCFSDLAFDATEVLLEKLQWKREEI DALIVVTQSPDYPIPATAIILQDRLGLSHATVAFDVNLGCSAYPFGINLLGSMIAAGGVKKGLLLVGDRSANLEDPIFSD SGTATALEFSADAPPMYFDLNSDGSGYKAIILPVGGHREPVGIQHLVPYRDEADGAWKRGVDLILDGVAVLSFSTQRIPP AVQKLLEYTGVAKEDIDYFVFHQANRMINETIRKKLGLPVEKVPSTLRDFGNTSGASLPVTMTARINKELESGRKRVLLC GFGIGLSWGTCLVDIEGAVFPDLIES
Sequences:
>Translated_346_residues MPTSTLHNVRFAGMATCVPKRVVSNLTDCRPQIRSERERLVRNIGIETRRMASEWQCFSDLAFDATEVLLEKLQWKREEI DALIVVTQSPDYPIPATAIILQDRLGLSHATVAFDVNLGCSAYPFGINLLGSMIAAGGVKKGLLLVGDRSANLEDPIFSD SGTATALEFSADAPPMYFDLNSDGSGYKAIILPVGGHREPVGIQHLVPYRDEADGAWKRGVDLILDGVAVLSFSTQRIPP AVQKLLEYTGVAKEDIDYFVFHQANRMINETIRKKLGLPVEKVPSTLRDFGNTSGASLPVTMTARINKELESGRKRVLLC GFGIGLSWGTCLVDIEGAVFPDLIES >Mature_345_residues PTSTLHNVRFAGMATCVPKRVVSNLTDCRPQIRSERERLVRNIGIETRRMASEWQCFSDLAFDATEVLLEKLQWKREEID ALIVVTQSPDYPIPATAIILQDRLGLSHATVAFDVNLGCSAYPFGINLLGSMIAAGGVKKGLLLVGDRSANLEDPIFSDS GTATALEFSADAPPMYFDLNSDGSGYKAIILPVGGHREPVGIQHLVPYRDEADGAWKRGVDLILDGVAVLSFSTQRIPPA VQKLLEYTGVAKEDIDYFVFHQANRMINETIRKKLGLPVEKVPSTLRDFGNTSGASLPVTMTARINKELESGRKRVLLCG FGIGLSWGTCLVDIEGAVFPDLIES
Specific function: May catalyze the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP [H]
COG id: COG0332
COG function: function code I; 3-oxoacyl-[acyl-carrier-protein] synthase III
Gene ontology:
Cell location: Cytoplasm (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the fabH family [H]
Homologues:
Organism=Escherichia coli, GI1787333, Length=335, Percent_Identity=26.2686567164179, Blast_Score=117, Evalue=8e-28,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013751 - InterPro: IPR013747 - InterPro: IPR016039 - InterPro: IPR016038 [H]
Pfam domain/function: PF08545 ACP_syn_III; PF08541 ACP_syn_III_C [H]
EC number: =2.3.1.180 [H]
Molecular weight: Translated: 37822; Mature: 37691
Theoretical pI: Translated: 5.46; Mature: 5.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPTSTLHNVRFAGMATCVPKRVVSNLTDCRPQIRSERERLVRNIGIETRRMASEWQCFSD CCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH LAFDATEVLLEKLQWKREEIDALIVVTQSPDYPIPATAIILQDRLGLSHATVAFDVNLGC HHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCEEEEEEHHCCCCEEEEEEEECCCC SAYPFGINLLGSMIAAGGVKKGLLLVGDRSANLEDPIFSDSGTATALEFSADAPPMYFDL CCCCCHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCEEEEEECCCCCCEEEEE NSDGSGYKAIILPVGGHREPVGIQHLVPYRDEADGAWKRGVDLILDGVAVLSFSTQRIPP CCCCCCEEEEEEECCCCCCCCCCHHCCCCCCCCCCHHHHCHHHHHHHHHHEECCCCCCCH AVQKLLEYTGVAKEDIDYFVFHQANRMINETIRKKLGLPVEKVPSTLRDFGNTSGASLPV HHHHHHHHHCCCHHCCCEEEHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCEEE TMTARINKELESGRKRVLLCGFGIGLSWGTCLVDIEGAVFPDLIES EEHHHHHHHHHCCCCEEEEEEECCCCCCCEEEEEECCCCCHHHHCC >Mature Secondary Structure PTSTLHNVRFAGMATCVPKRVVSNLTDCRPQIRSERERLVRNIGIETRRMASEWQCFSD CCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH LAFDATEVLLEKLQWKREEIDALIVVTQSPDYPIPATAIILQDRLGLSHATVAFDVNLGC HHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCEEEEEEHHCCCCEEEEEEEECCCC SAYPFGINLLGSMIAAGGVKKGLLLVGDRSANLEDPIFSDSGTATALEFSADAPPMYFDL CCCCCHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCEEEEEECCCCCCEEEEE NSDGSGYKAIILPVGGHREPVGIQHLVPYRDEADGAWKRGVDLILDGVAVLSFSTQRIPP CCCCCCEEEEEEECCCCCCCCCCHHCCCCCCCCCCHHHHCHHHHHHHHHHEECCCCCCCH AVQKLLEYTGVAKEDIDYFVFHQANRMINETIRKKLGLPVEKVPSTLRDFGNTSGASLPV HHHHHHHHHCCCHHCCCEEEHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCEEE TMTARINKELESGRKRVLLCGFGIGLSWGTCLVDIEGAVFPDLIES EEHHHHHHHHHCCCCEEEEEEECCCCCCCEEEEEECCCCCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10688204 [H]