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The map label for this gene is tse [H]

Identifier: 78047501

GI number: 78047501

Start: 2209767

End: 2212025

Strand: Reverse

Name: tse [H]

Synonym: XCV1945

Alternate gene names: 78047501

Gene position: 2212025-2209767 (Counterclockwise)

Preceding gene: 78047502

Following gene: 78047500

Centisome position: 42.72

GC content: 62.73

Gene sequence:

>2259_bases
ATGACCTCACTTCTTCAACGTTACAACGTCGGCCCACGTCTAGCGGCCGCCTTCGCTGTGCTGATTGTGCTGTCGGGCCT
GATCGCCTTGATCGGTTATCGCGGATTGACGTCAGCACGTGCTTTGGTCGACGGCATCGTGAACCAGAACATGGCGAAGA
TTCGCCTGTCCAACGACATGATGAACGCCAATTTCATTATCGGCACGCAGCTGCGCAATCTGGTATTGCCTACCAGCGAT
GAAGAGAATCGCCAGTTCGTCGCCAAGATCCAGTCTGCGCGTGCCGACTACAACAAAGCGCGCGAAGCGTTGTATGCCAT
GCCGGCCTCGGAGCAAGGCAAGATCCTGCGTGCAGAGATCGATGCGCGCCGCGCCGAAGTCAAGGGTTTGAATGACAAGG
TCATGGATCTGGTGATGACCGGTCACAGCGACGAGGCACTTCCTTTTCTGCTGAACAAGGCGGCGCCCGCCATGCAGGTC
TGGCAGGACAAAATTGCCGAAAACATTGCCCTGCAGGAAAAGCAGGCAGCCGATGCATCGGCTGTCGCATTCAAGTCCAT
GGACGACTCGCGCAAGCTGCTGATCGGCGGCTCGCTGCTGGTCGTGCTGCTGAGCGGCGCACTGGGCGTGCTGATCACCC
GTAGCCTGACCCAGCCGTTGAGCCGCGCGACCCGCGCCGCCGAATCCATCGCCGGCGGCCAGCTGGATAACGACGTCGAC
ACCCAGTTCAACGACGAGGCCGGGCGCCTGCTCAAGGCGATGAGCAAGATGCAACAGCAGTTGCGCAATCTGCTCAGCGC
GCAGACCGACATGGCCCGTCGCCATGATGAAGGCCAGATCAGCTTCCGCATCGATGCCGAGGCGTTCCCAGGCGAATACG
GACGCATGGCCAGCGATACCAACAATCTGGTCGCATCGCATATCGCGGTGAAGTTGAAGCTTGCGCAGATCATGGGCCGC
TACGCCATCGGCGATCTCAGCGAGGACATGGACAAGCTGCCCGGCGAAAAGGCCGTGCTCACCGACACCATGGCGCAGGT
CAAATCCAACCTGTCGGCGATGAATACCGAGATCAAGCACCTGGCGACATCGGCGGCCAATGGCGACTTCAGCGCCCGCG
GCGATGCCGAGCGTTTCCAGTACGACTTCCGCGTGATGGTGGACAGCCTCAACACCTTGATGTCTACCGCCGACGGCAAC
CTGCAATCGCTCTCTGGCTTGTTGCAGTCGATCGCTGCCGGCGACCTCACCGCCCGCATGAGCGGTGAATTCCACGGCGT
GTTTGCGCAGATGCGCGACGATGCCAATGCCACTGCCACGCAGCTGGCCGAGATCGTCAGCGGCATCAAGGCCTCGGCCA
CGTCGATCAGGGGTGCGGCAAGCGAAATCGCCGCCGGCAATCAGGACCTGTCCCAGCGCACCGAGCAGCAGGCTGCCAAC
CTGGAAGAAACCGCTGCCTCGATGGAAGAGCTCACCTCCACCGTCAAGCAGAACGCCGAAAGCGCACGCCAGGCCAACCA
GCTCGCCATCGGCGCGGCCAGCGTGGCCTCGCAGGGCGGCGAGATCGTCAGCAAGGTGGTCGGCACCATGAGCGGGATCG
AAGCCTCGTCCAAGAAGATCGCCGACATCATTTCCGTCATCGACGGCATCGCGTTCCAGACCAATATCCTGGCCTTGAAC
GCGGCAGTGGAAGCCGCACGCGCCGGCGAACAGGGCCGTGGCTTTGCGGTCGTGGCTTCGGAAGTGCGCACCCTGGCGCA
GCGCTCTTCGGGCGCGGCGAAGGAGATCAAGGACCTGATCGACGACTCCGTGCAGCGGGTGGCCGAAGGCTCGGTACTGG
TACACAGCGCCGGCACCACCATGGGCGAGATCGTGGCCAGCGTGCAGCGCGTCACCGACATCATGGGCGAGATTTCCGCG
GCCTCGCAGGAGCAGTCTGCCGGGATCGAGCAGGTCAACCAGACCGTGACAAGCATGGACGAAACCACCCAGCAGAACGC
TGCGCTGGTGGAAGAAGCCACCGCTGCAGCACGCGCAATGGAAGAACAAGCCCAGCAACTGACCGAAGCGGTGGCACTGT
TCCGTCTGTCGGCGGACATGGAAACGGTGACCCGCACCGCGCCGGCGGTGCGCCAGATTGCCGCCAAGCGTCCGGTTGCG
GTGAGCAAGCCTGCAATCAAGCCGCCTGTCGCGCGCCCGACGGCACGCGCCGCTGTCGCGTCGGTCGCAAACGACGCGTC
CAATTGGGCCGAGTTCTAA

Upstream 100 bases:

>100_bases
TCAAGCGCCGTTATTGGGCATAGCGAGACGTCAGACTGCACTCGACTGGCGTTTCCGCATCGCTCGCTTTTATCGCGCAA
CGCTTGCCAGGAACCCTGTC

Downstream 100 bases:

>100_bases
TACCGGCCCCGGGGCTGCACCTGGACACCGCGCTCGCCGGCGAGCGCGGTGTTTTTTTATGGGCAGTGCTTCTGGCGCCA
GGCGCATTGCCGGGCATCAC

Product: methyl-accepting chemotaxis protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 752; Mature: 751

Protein sequence:

>752_residues
MTSLLQRYNVGPRLAAAFAVLIVLSGLIALIGYRGLTSARALVDGIVNQNMAKIRLSNDMMNANFIIGTQLRNLVLPTSD
EENRQFVAKIQSARADYNKAREALYAMPASEQGKILRAEIDARRAEVKGLNDKVMDLVMTGHSDEALPFLLNKAAPAMQV
WQDKIAENIALQEKQAADASAVAFKSMDDSRKLLIGGSLLVVLLSGALGVLITRSLTQPLSRATRAAESIAGGQLDNDVD
TQFNDEAGRLLKAMSKMQQQLRNLLSAQTDMARRHDEGQISFRIDAEAFPGEYGRMASDTNNLVASHIAVKLKLAQIMGR
YAIGDLSEDMDKLPGEKAVLTDTMAQVKSNLSAMNTEIKHLATSAANGDFSARGDAERFQYDFRVMVDSLNTLMSTADGN
LQSLSGLLQSIAAGDLTARMSGEFHGVFAQMRDDANATATQLAEIVSGIKASATSIRGAASEIAAGNQDLSQRTEQQAAN
LEETAASMEELTSTVKQNAESARQANQLAIGAASVASQGGEIVSKVVGTMSGIEASSKKIADIISVIDGIAFQTNILALN
AAVEAARAGEQGRGFAVVASEVRTLAQRSSGAAKEIKDLIDDSVQRVAEGSVLVHSAGTTMGEIVASVQRVTDIMGEISA
ASQEQSAGIEQVNQTVTSMDETTQQNAALVEEATAAARAMEEQAQQLTEAVALFRLSADMETVTRTAPAVRQIAAKRPVA
VSKPAIKPPVARPTARAAVASVANDASNWAEF

Sequences:

>Translated_752_residues
MTSLLQRYNVGPRLAAAFAVLIVLSGLIALIGYRGLTSARALVDGIVNQNMAKIRLSNDMMNANFIIGTQLRNLVLPTSD
EENRQFVAKIQSARADYNKAREALYAMPASEQGKILRAEIDARRAEVKGLNDKVMDLVMTGHSDEALPFLLNKAAPAMQV
WQDKIAENIALQEKQAADASAVAFKSMDDSRKLLIGGSLLVVLLSGALGVLITRSLTQPLSRATRAAESIAGGQLDNDVD
TQFNDEAGRLLKAMSKMQQQLRNLLSAQTDMARRHDEGQISFRIDAEAFPGEYGRMASDTNNLVASHIAVKLKLAQIMGR
YAIGDLSEDMDKLPGEKAVLTDTMAQVKSNLSAMNTEIKHLATSAANGDFSARGDAERFQYDFRVMVDSLNTLMSTADGN
LQSLSGLLQSIAAGDLTARMSGEFHGVFAQMRDDANATATQLAEIVSGIKASATSIRGAASEIAAGNQDLSQRTEQQAAN
LEETAASMEELTSTVKQNAESARQANQLAIGAASVASQGGEIVSKVVGTMSGIEASSKKIADIISVIDGIAFQTNILALN
AAVEAARAGEQGRGFAVVASEVRTLAQRSSGAAKEIKDLIDDSVQRVAEGSVLVHSAGTTMGEIVASVQRVTDIMGEISA
ASQEQSAGIEQVNQTVTSMDETTQQNAALVEEATAAARAMEEQAQQLTEAVALFRLSADMETVTRTAPAVRQIAAKRPVA
VSKPAIKPPVARPTARAAVASVANDASNWAEF
>Mature_751_residues
TSLLQRYNVGPRLAAAFAVLIVLSGLIALIGYRGLTSARALVDGIVNQNMAKIRLSNDMMNANFIIGTQLRNLVLPTSDE
ENRQFVAKIQSARADYNKAREALYAMPASEQGKILRAEIDARRAEVKGLNDKVMDLVMTGHSDEALPFLLNKAAPAMQVW
QDKIAENIALQEKQAADASAVAFKSMDDSRKLLIGGSLLVVLLSGALGVLITRSLTQPLSRATRAAESIAGGQLDNDVDT
QFNDEAGRLLKAMSKMQQQLRNLLSAQTDMARRHDEGQISFRIDAEAFPGEYGRMASDTNNLVASHIAVKLKLAQIMGRY
AIGDLSEDMDKLPGEKAVLTDTMAQVKSNLSAMNTEIKHLATSAANGDFSARGDAERFQYDFRVMVDSLNTLMSTADGNL
QSLSGLLQSIAAGDLTARMSGEFHGVFAQMRDDANATATQLAEIVSGIKASATSIRGAASEIAAGNQDLSQRTEQQAANL
EETAASMEELTSTVKQNAESARQANQLAIGAASVASQGGEIVSKVVGTMSGIEASSKKIADIISVIDGIAFQTNILALNA
AVEAARAGEQGRGFAVVASEVRTLAQRSSGAAKEIKDLIDDSVQRVAEGSVLVHSAGTTMGEIVASVQRVTDIMGEISAA
SQEQSAGIEQVNQTVTSMDETTQQNAALVEEATAAARAMEEQAQQLTEAVALFRLSADMETVTRTAPAVRQIAAKRPVAV
SKPAIKPPVARPTARAAVASVANDASNWAEF

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: COG0840

COG function: function code NT; Methyl-accepting chemotaxis protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI1788195, Length=345, Percent_Identity=55.3623188405797, Blast_Score=308, Evalue=1e-84,
Organism=Escherichia coli, GI2367378, Length=308, Percent_Identity=61.6883116883117, Blast_Score=305, Evalue=8e-84,
Organism=Escherichia coli, GI1788194, Length=291, Percent_Identity=58.0756013745705, Blast_Score=286, Evalue=3e-78,
Organism=Escherichia coli, GI1787690, Length=296, Percent_Identity=56.7567567567568, Blast_Score=280, Evalue=3e-76,
Organism=Escherichia coli, GI1789453, Length=251, Percent_Identity=43.8247011952191, Blast_Score=207, Evalue=2e-54,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004090
- InterPro:   IPR003122
- InterPro:   IPR004091
- InterPro:   IPR004089
- InterPro:   IPR003660 [H]

Pfam domain/function: PF00672 HAMP; PF00015 MCPsignal; PF02203 TarH [H]

EC number: NA

Molecular weight: Translated: 79769; Mature: 79638

Theoretical pI: Translated: 4.95; Mature: 4.95

Prosite motif: PS50885 HAMP ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSLLQRYNVGPRLAAAFAVLIVLSGLIALIGYRGLTSARALVDGIVNQNMAKIRLSNDM
CCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHEEEECCCC
MNANFIIGTQLRNLVLPTSDEENRQFVAKIQSARADYNKAREALYAMPASEQGKILRAEI
CCCCEEEEHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEHHH
DARRAEVKGLNDKVMDLVMTGHSDEALPFLLNKAAPAMQVWQDKIAENIALQEKQAADAS
HHHHHHHCCCCHHHHHHHHCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCHH
AVAFKSMDDSRKLLIGGSLLVVLLSGALGVLITRSLTQPLSRATRAAESIAGGQLDNDVD
HHHHHCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
TQFNDEAGRLLKAMSKMQQQLRNLLSAQTDMARRHDEGQISFRIDAEAFPGEYGRMASDT
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCH
NNLVASHIAVKLKLAQIMGRYAIGDLSEDMDKLPGEKAVLTDTMAQVKSNLSAMNTEIKH
HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH
LATSAANGDFSARGDAERFQYDFRVMVDSLNTLMSTADGNLQSLSGLLQSIAAGDLTARM
HHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHH
SGEFHGVFAQMRDDANATATQLAEIVSGIKASATSIRGAASEIAAGNQDLSQRTEQQAAN
CCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
LEETAASMEELTSTVKQNAESARQANQLAIGAASVASQGGEIVSKVVGTMSGIEASSKKI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHH
ADIISVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRTLAQRSSGAAKEIKDLI
HHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHH
DDSVQRVAEGSVLVHSAGTTMGEIVASVQRVTDIMGEISAASQEQSAGIEQVNQTVTSMD
HHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCHHHHCCHHHHHHHHHHHH
ETTQQNAALVEEATAAARAMEEQAQQLTEAVALFRLSADMETVTRTAPAVRQIAAKRPVA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCC
VSKPAIKPPVARPTARAAVASVANDASNWAEF
CCCCCCCCCCCCCHHHHHHHHHHHCCHHHCCC
>Mature Secondary Structure 
TSLLQRYNVGPRLAAAFAVLIVLSGLIALIGYRGLTSARALVDGIVNQNMAKIRLSNDM
CHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHEEEECCCC
MNANFIIGTQLRNLVLPTSDEENRQFVAKIQSARADYNKAREALYAMPASEQGKILRAEI
CCCCEEEEHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEHHH
DARRAEVKGLNDKVMDLVMTGHSDEALPFLLNKAAPAMQVWQDKIAENIALQEKQAADAS
HHHHHHHCCCCHHHHHHHHCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCHH
AVAFKSMDDSRKLLIGGSLLVVLLSGALGVLITRSLTQPLSRATRAAESIAGGQLDNDVD
HHHHHCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
TQFNDEAGRLLKAMSKMQQQLRNLLSAQTDMARRHDEGQISFRIDAEAFPGEYGRMASDT
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCH
NNLVASHIAVKLKLAQIMGRYAIGDLSEDMDKLPGEKAVLTDTMAQVKSNLSAMNTEIKH
HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH
LATSAANGDFSARGDAERFQYDFRVMVDSLNTLMSTADGNLQSLSGLLQSIAAGDLTARM
HHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHH
SGEFHGVFAQMRDDANATATQLAEIVSGIKASATSIRGAASEIAAGNQDLSQRTEQQAAN
CCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
LEETAASMEELTSTVKQNAESARQANQLAIGAASVASQGGEIVSKVVGTMSGIEASSKKI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHH
ADIISVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRTLAQRSSGAAKEIKDLI
HHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHH
DDSVQRVAEGSVLVHSAGTTMGEIVASVQRVTDIMGEISAASQEQSAGIEQVNQTVTSMD
HHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCHHHHCCHHHHHHHHHHHH
ETTQQNAALVEEATAAARAMEEQAQQLTEAVALFRLSADMETVTRTAPAVRQIAAKRPVA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCC
VSKPAIKPPVARPTARAAVASVANDASNWAEF
CCCCCCCCCCCCCHHHHHHHHHHHCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 2496104 [H]