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The map label for this gene is tse [H]

Identifier: 78047500

GI number: 78047500

Start: 2207078

End: 2209483

Strand: Reverse

Name: tse [H]

Synonym: XCV1944

Alternate gene names: 78047500

Gene position: 2209483-2207078 (Counterclockwise)

Preceding gene: 78047501

Following gene: 78047499

Centisome position: 42.67

GC content: 63.92

Gene sequence:

>2406_bases
ATGCGTGACGAAACTCTTCAGTCGAGAGTGGTTGCGCCGCTAGCTATGTCAGCAACGAGGCACGCCTGCGAGCGCGAAAA
CGCCTCACTGCACTGCGCCACCACACGGCCGATCACGGGGGGCCGAACGGATGGCTCCCACTACTCAGATTGTTACCAGC
TCAAGGCACATTCGATGAAACAGCTAAGTCTTTCGACACAACTTGCACTGGGTTTCGGCACAGTTGTTCTTGTGCTCTTG
ATCGTCGCAACGGTAGGCCTACGTGGGCAGTCCCAGCTGTCGGACGCGGTGGCCATGAACGACCACACCTATCAGGTCAT
CGGCACCGGCCGCGCCATGTCCATTGCCACGGTCAACATCGAGACGGGCGCGCGCGGCTTTATGCTGTCCGGGCAGGACC
AGCATCTCACGCCGTACAACAACGGCAAGGTGCAGTTCGAACAGGAATTCACCAACGCCAAGACCTTGACCGCCGACAAC
CCGGTGCAGCAGGAACGCCTGCAGCGCCTGCATGCGGCGTATGAGCAGTTCTTGCGCTTTGAGGACAACCTGATCGCGCT
GCGCGGCAAAAGCAGTGATACAGAGCTGTCCGCACTGCTGACGCAATTCAAGGCCGGCCATGAACGTGCGGCGATGGGCC
AGATCCGTCAGCTGCTGGTCGACTTCGAAGCGCAGGAAAACGAATTGCTGGTCAAGCGCAGCGCAACCTTGAAGGCCGCC
AAGGCCAGCAGCCGTTGGTCGATGATCATCGGCAGCGGCGTCGCGGTGCTGGTGGCGCTGGCCAGCGGCTGGCTGATCCG
TCGTCGCCTGATCAATCGCCTGGGTGAGGCCTCGCACGTGGCCGATTCGATTGCCGCCGGCAACGTGCCCATCAGCGTGG
ACAGCAGCGGCACCGACGAGACTGGTCGCCTGCTCGCCAGCATGAGCAAGATGCAGCAGCAGTTGCAGAAAGTCTTGCAC
GGCCAGCAGGAAATGAAGCGCCGGCACGATCAGGGCGAGCTGAACTTCCGCCTGGACGAAGCAGCGTTTCCTGGCGACTA
CGCCACCATCGTGCGCGGCAACAACGACCTGGCCGCCTCGCATGTGGCCGTGATGATGCGGTTGGCGCAGATCATGGGCC
AATACGCTGTCGGCGACCTGCGCGAAGACATGGAAGCCCTGCCCGGCGACAAGGCCGTGCTCAGCGACACCATGGCCAAG
GTCAAGGGCAACCTGTCTTCGGTCAATCACGCCATCAAGCACCTTTCCCAATGCGCCGCCAATGGCGACTTCAGCGCCCG
CGGCGATGCCGAGAATTTCCAGCACGACTTCCGGGTGATGGTGGAAAGCCTCAACACCTTGATGGCCACTGCCGACGGCA
ACCTGCAATCCCTCTCGGGCTTGTTGCAGTCGATCGCTGCCGGTGACCTCACCGCCCGCATGAGCGGCGAGTTCCATGGC
GTGTTTGCACAGATGCGCGACGATGCCAATGCCACCGCCGTGCAGCTGGCCGAAATCGTCACCGGCATCAAGGCGTCGGC
CATCTCGATCAAGGCCGCTGCCAGCGAGATCGCTGCCGGCAACAGCGACCTGTCGCAGCGTACCGAACAGCAGGCTGCCA
GCCTGGAAGAAACGGCCGCCTCGATGGAAGAGCTCACCTCCACCGTCAAGCAGAACGCCGAAAGCGCACGCCAGGCCAAC
CAGCTCGCCATCGGCGCGGCCAGCGTGGCCACCCAGGGCGGTGAGATCGCCGGCCAGGTGGTCGAAACCATGGCCGGCAT
CGAGGCCTCGTCCAAGAAGATCGCCGATATCATCTCCGTCATCGACGGCATCGCCTTCCAGACCAATATCCTGGCCTTGA
ACGCGGCGGTGGAAGCGGCACGTGCCGGCGAGCAAGGCCGCGGCTTCGCCGTGGTGGCTTCCGAAGTGCGCACGCTGGCG
CAGCGCTCTTCCGGCGCCGCCAAGGAGATCAAGGACCTGATCGCCGACTCGGTCGAACGTGTGGCCGCCGGTTCGGTGCT
GGTCAATACCGCTGGCAGGACCATGGGCGAGCTGGTGACCAGCGTGCAGCGGGTCACCGACATCATGGGCGAGATCTCTG
CAGCCTCGCAGGAACAGTCGGCCGGCATCGAACAGGTCAACCAGACCGTCACCCAGATGGACGAAACCACCCAACAGAAC
GCCGCGCTGGTGGAAGAAGCCACTGCCGCCGCGCGCGCGCTGGAAGAACAGGCGGTCGGATTGACCGAGGCCGTGGCGGT
CTTCAAGACCGAGCAAGGCACCACCAGCACGGTCCGCACGGCATCCGTCGCCAAGGCGGCGCCGGCCGTGCGCGCCAAGC
TGACCTCGATCGGCGGCAGCGCGGCCGCCAAGCCGCGCGCGGTTGCTGCATCGACGACCGTCGACACCAGCTGGCAGGAG
TTCTGA

Upstream 100 bases:

>100_bases
CTTTGCATGCGCTTGATCAGACCGGGGTGCCATCGCCAACAGCCCGCATCGGCAGAGCCCGCTTTTTTCGAACATAAATG
CCATCGAAATTGCGTGACGA

Downstream 100 bases:

>100_bases
TCAGCACGCACTGGCATCGGTGGGAGTGCTCACCGATGCCATGCGCCAGGCAGCCGCTCCACACATCAGTCATTGCAACA
CGCAGGGCCCGAGCCAGCAC

Product: methyl-accepting chemotaxis protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 801; Mature: 801

Protein sequence:

>801_residues
MRDETLQSRVVAPLAMSATRHACERENASLHCATTRPITGGRTDGSHYSDCYQLKAHSMKQLSLSTQLALGFGTVVLVLL
IVATVGLRGQSQLSDAVAMNDHTYQVIGTGRAMSIATVNIETGARGFMLSGQDQHLTPYNNGKVQFEQEFTNAKTLTADN
PVQQERLQRLHAAYEQFLRFEDNLIALRGKSSDTELSALLTQFKAGHERAAMGQIRQLLVDFEAQENELLVKRSATLKAA
KASSRWSMIIGSGVAVLVALASGWLIRRRLINRLGEASHVADSIAAGNVPISVDSSGTDETGRLLASMSKMQQQLQKVLH
GQQEMKRRHDQGELNFRLDEAAFPGDYATIVRGNNDLAASHVAVMMRLAQIMGQYAVGDLREDMEALPGDKAVLSDTMAK
VKGNLSSVNHAIKHLSQCAANGDFSARGDAENFQHDFRVMVESLNTLMATADGNLQSLSGLLQSIAAGDLTARMSGEFHG
VFAQMRDDANATAVQLAEIVTGIKASAISIKAAASEIAAGNSDLSQRTEQQAASLEETAASMEELTSTVKQNAESARQAN
QLAIGAASVATQGGEIAGQVVETMAGIEASSKKIADIISVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRTLA
QRSSGAAKEIKDLIADSVERVAAGSVLVNTAGRTMGELVTSVQRVTDIMGEISAASQEQSAGIEQVNQTVTQMDETTQQN
AALVEEATAAARALEEQAVGLTEAVAVFKTEQGTTSTVRTASVAKAAPAVRAKLTSIGGSAAAKPRAVAASTTVDTSWQE
F

Sequences:

>Translated_801_residues
MRDETLQSRVVAPLAMSATRHACERENASLHCATTRPITGGRTDGSHYSDCYQLKAHSMKQLSLSTQLALGFGTVVLVLL
IVATVGLRGQSQLSDAVAMNDHTYQVIGTGRAMSIATVNIETGARGFMLSGQDQHLTPYNNGKVQFEQEFTNAKTLTADN
PVQQERLQRLHAAYEQFLRFEDNLIALRGKSSDTELSALLTQFKAGHERAAMGQIRQLLVDFEAQENELLVKRSATLKAA
KASSRWSMIIGSGVAVLVALASGWLIRRRLINRLGEASHVADSIAAGNVPISVDSSGTDETGRLLASMSKMQQQLQKVLH
GQQEMKRRHDQGELNFRLDEAAFPGDYATIVRGNNDLAASHVAVMMRLAQIMGQYAVGDLREDMEALPGDKAVLSDTMAK
VKGNLSSVNHAIKHLSQCAANGDFSARGDAENFQHDFRVMVESLNTLMATADGNLQSLSGLLQSIAAGDLTARMSGEFHG
VFAQMRDDANATAVQLAEIVTGIKASAISIKAAASEIAAGNSDLSQRTEQQAASLEETAASMEELTSTVKQNAESARQAN
QLAIGAASVATQGGEIAGQVVETMAGIEASSKKIADIISVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRTLA
QRSSGAAKEIKDLIADSVERVAAGSVLVNTAGRTMGELVTSVQRVTDIMGEISAASQEQSAGIEQVNQTVTQMDETTQQN
AALVEEATAAARALEEQAVGLTEAVAVFKTEQGTTSTVRTASVAKAAPAVRAKLTSIGGSAAAKPRAVAASTTVDTSWQE
F
>Mature_801_residues
MRDETLQSRVVAPLAMSATRHACERENASLHCATTRPITGGRTDGSHYSDCYQLKAHSMKQLSLSTQLALGFGTVVLVLL
IVATVGLRGQSQLSDAVAMNDHTYQVIGTGRAMSIATVNIETGARGFMLSGQDQHLTPYNNGKVQFEQEFTNAKTLTADN
PVQQERLQRLHAAYEQFLRFEDNLIALRGKSSDTELSALLTQFKAGHERAAMGQIRQLLVDFEAQENELLVKRSATLKAA
KASSRWSMIIGSGVAVLVALASGWLIRRRLINRLGEASHVADSIAAGNVPISVDSSGTDETGRLLASMSKMQQQLQKVLH
GQQEMKRRHDQGELNFRLDEAAFPGDYATIVRGNNDLAASHVAVMMRLAQIMGQYAVGDLREDMEALPGDKAVLSDTMAK
VKGNLSSVNHAIKHLSQCAANGDFSARGDAENFQHDFRVMVESLNTLMATADGNLQSLSGLLQSIAAGDLTARMSGEFHG
VFAQMRDDANATAVQLAEIVTGIKASAISIKAAASEIAAGNSDLSQRTEQQAASLEETAASMEELTSTVKQNAESARQAN
QLAIGAASVATQGGEIAGQVVETMAGIEASSKKIADIISVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRTLA
QRSSGAAKEIKDLIADSVERVAAGSVLVNTAGRTMGELVTSVQRVTDIMGEISAASQEQSAGIEQVNQTVTQMDETTQQN
AALVEEATAAARALEEQAVGLTEAVAVFKTEQGTTSTVRTASVAKAAPAVRAKLTSIGGSAAAKPRAVAASTTVDTSWQE
F

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: COG0840

COG function: function code NT; Methyl-accepting chemotaxis protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI2367378, Length=493, Percent_Identity=45.0304259634888, Blast_Score=305, Evalue=1e-83,
Organism=Escherichia coli, GI1788195, Length=306, Percent_Identity=59.4771241830065, Blast_Score=292, Evalue=6e-80,
Organism=Escherichia coli, GI1788194, Length=295, Percent_Identity=57.9661016949153, Blast_Score=283, Evalue=2e-77,
Organism=Escherichia coli, GI1787690, Length=304, Percent_Identity=56.25, Blast_Score=278, Evalue=8e-76,
Organism=Escherichia coli, GI1789453, Length=250, Percent_Identity=42.4, Blast_Score=195, Evalue=1e-50,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004090
- InterPro:   IPR003122
- InterPro:   IPR004091
- InterPro:   IPR004089
- InterPro:   IPR003660 [H]

Pfam domain/function: PF00672 HAMP; PF00015 MCPsignal; PF02203 TarH [H]

EC number: NA

Molecular weight: Translated: 84797; Mature: 84797

Theoretical pI: Translated: 5.66; Mature: 5.66

Prosite motif: PS50885 HAMP ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRDETLQSRVVAPLAMSATRHACERENASLHCATTRPITGGRTDGSHYSDCYQLKAHSMK
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHH
QLSLSTQLALGFGTVVLVLLIVATVGLRGQSQLSDAVAMNDHTYQVIGTGRAMSIATVNI
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCEEEEEECCCEEEEEEEEE
ETGARGFMLSGQDQHLTPYNNGKVQFEQEFTNAKTLTADNPVQQERLQRLHAAYEQFLRF
CCCCCEEEECCCCCCCCCCCCCCEEEEEHHCCCCEECCCCCHHHHHHHHHHHHHHHHHHH
EDNLIALRGKSSDTELSALLTQFKAGHERAAMGQIRQLLVDFEAQENELLVKRSATLKAA
CCCEEEEECCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHH
KASSRWSMIIGSGVAVLVALASGWLIRRRLINRLGEASHVADSIAAGNVPISVDSSGTDE
HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCEEEECCCCCCH
TGRLLASMSKMQQQLQKVLHGQQEMKRRHDQGELNFRLDEAAFPGDYATIVRGNNDLAAS
HHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCEEEEECCCCCCCCCEEEEECCCCHHHH
HVAVMMRLAQIMGQYAVGDLREDMEALPGDKAVLSDTMAKVKGNLSSVNHAIKHLSQCAA
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHC
NGDFSARGDAENFQHDFRVMVESLNTLMATADGNLQSLSGLLQSIAAGDLTARMSGEFHG
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCHHHHHCCCHHH
VFAQMRDDANATAVQLAEIVTGIKASAISIKAAASEIAAGNSDLSQRTEQQAASLEETAA
HHHHHHCCCCHHHHHHHHHHHCCHHHHEEHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
SMEELTSTVKQNAESARQANQLAIGAASVATQGGEIAGQVVETMAGIEASSKKIADIISV
HHHHHHHHHHHHHHHHHHHHHHHEEHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHH
IDGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRTLAQRSSGAAKEIKDLIADSVER
HHCHHHHHHHEEHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
VAAGSVLVNTAGRTMGELVTSVQRVTDIMGEISAASQEQSAGIEQVNQTVTQMDETTQQN
HHHCHHEEECCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCHHHHHHHHHHHHHHHHHH
AALVEEATAAARALEEQAVGLTEAVAVFKTEQGTTSTVRTASVAKAAPAVRAKLTSIGGS
HHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCC
AAAKPRAVAASTTVDTSWQEF
CCCCCCCEEECCCCCCCCCCC
>Mature Secondary Structure
MRDETLQSRVVAPLAMSATRHACERENASLHCATTRPITGGRTDGSHYSDCYQLKAHSMK
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHH
QLSLSTQLALGFGTVVLVLLIVATVGLRGQSQLSDAVAMNDHTYQVIGTGRAMSIATVNI
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCEEEEEECCCEEEEEEEEE
ETGARGFMLSGQDQHLTPYNNGKVQFEQEFTNAKTLTADNPVQQERLQRLHAAYEQFLRF
CCCCCEEEECCCCCCCCCCCCCCEEEEEHHCCCCEECCCCCHHHHHHHHHHHHHHHHHHH
EDNLIALRGKSSDTELSALLTQFKAGHERAAMGQIRQLLVDFEAQENELLVKRSATLKAA
CCCEEEEECCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHH
KASSRWSMIIGSGVAVLVALASGWLIRRRLINRLGEASHVADSIAAGNVPISVDSSGTDE
HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCEEEECCCCCCH
TGRLLASMSKMQQQLQKVLHGQQEMKRRHDQGELNFRLDEAAFPGDYATIVRGNNDLAAS
HHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCEEEEECCCCCCCCCEEEEECCCCHHHH
HVAVMMRLAQIMGQYAVGDLREDMEALPGDKAVLSDTMAKVKGNLSSVNHAIKHLSQCAA
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHC
NGDFSARGDAENFQHDFRVMVESLNTLMATADGNLQSLSGLLQSIAAGDLTARMSGEFHG
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCHHHHHCCCHHH
VFAQMRDDANATAVQLAEIVTGIKASAISIKAAASEIAAGNSDLSQRTEQQAASLEETAA
HHHHHHCCCCHHHHHHHHHHHCCHHHHEEHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
SMEELTSTVKQNAESARQANQLAIGAASVATQGGEIAGQVVETMAGIEASSKKIADIISV
HHHHHHHHHHHHHHHHHHHHHHHEEHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHH
IDGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRTLAQRSSGAAKEIKDLIADSVER
HHCHHHHHHHEEHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
VAAGSVLVNTAGRTMGELVTSVQRVTDIMGEISAASQEQSAGIEQVNQTVTQMDETTQQN
HHHCHHEEECCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCHHHHHHHHHHHHHHHHHH
AALVEEATAAARALEEQAVGLTEAVAVFKTEQGTTSTVRTASVAKAAPAVRAKLTSIGGS
HHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCC
AAAKPRAVAASTTVDTSWQEF
CCCCCCCEEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 2496104 [H]