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The map label for this gene is CheD [H]

Identifier: 78047487

GI number: 78047487

Start: 2185740

End: 2186336

Strand: Reverse

Name: CheD [H]

Synonym: XCV1931

Alternate gene names: 78047487

Gene position: 2186336-2185740 (Counterclockwise)

Preceding gene: 78047488

Following gene: 78047486

Centisome position: 42.22

GC content: 62.98

Gene sequence:

>597_bases
ATGAGTACTGCCGTGCAAGTCGACGACGTCATGCGCTACCGCGATTCGCGGTTCCAGACCATTGCCGCCAAACTGCTGCC
CACCCAATACCTGGTGGTGGACGACGACACCGCGTTGACGACCACCTTGGGATCGTGCGTTGCAGCCTGCCTGCGCGACC
CGGTGCTCAAGATCGGCGGCATGAACCACTTTCTGTTGCCCAAAGGCCAGGTCGGCGACGGAGCGCCCACGCGCTACGGC
AGCTATGCCATGGAGTTGCTGATCAACGACATGCTCAAGCGCGGCGCGCACCGCAAACGCATCGAAGCCAAGGTCTTCGG
TGGCGCCAACGTGCTGAAGGGCTTCACCAGCAACCCGGTCGGCACCCGCAACGCCGAGTTCGTGCGCCAGTACCTGCAGG
CCGAACATATTCCCATCATCGCTGAAGATCTGTGTGGCATCCATCCGCGCAAGGTGTGGTTCTTCGCGACCACTGGCCGC
GTCGTCGTGCAGCGCTTGCCGCACGCACACGAAGCCGAAGTCGCCGCCACCGAATCGGCCGTGCGCGCCCGTCTGTCCAA
AGCACCGGTTACCGGTGGAGTGGAGTTGTTCGAATGA

Upstream 100 bases:

>100_bases
TCTACACCGGGCACTCGGAGAACTACCTGCACGCGGCCGATCTGATCCAGCCGTGCGGGCGCACGCTGTATCGGCGCGCA
CCGCGCGCAGGAGCCTGAGC

Downstream 100 bases:

>100_bases
CGCTGGAAACCCCTGTGCGTGTATTGATCGTCGACGATTCGGCGGTCGTGCGTCAGATGCTCACCGAAATTTTGTCGCGC
GACGCCGGCATCGAAGTGGT

Product: chemoreceptor glutamine deamidase CheD

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 198; Mature: 197

Protein sequence:

>198_residues
MSTAVQVDDVMRYRDSRFQTIAAKLLPTQYLVVDDDTALTTTLGSCVAACLRDPVLKIGGMNHFLLPKGQVGDGAPTRYG
SYAMELLINDMLKRGAHRKRIEAKVFGGANVLKGFTSNPVGTRNAEFVRQYLQAEHIPIIAEDLCGIHPRKVWFFATTGR
VVVQRLPHAHEAEVAATESAVRARLSKAPVTGGVELFE

Sequences:

>Translated_198_residues
MSTAVQVDDVMRYRDSRFQTIAAKLLPTQYLVVDDDTALTTTLGSCVAACLRDPVLKIGGMNHFLLPKGQVGDGAPTRYG
SYAMELLINDMLKRGAHRKRIEAKVFGGANVLKGFTSNPVGTRNAEFVRQYLQAEHIPIIAEDLCGIHPRKVWFFATTGR
VVVQRLPHAHEAEVAATESAVRARLSKAPVTGGVELFE
>Mature_197_residues
STAVQVDDVMRYRDSRFQTIAAKLLPTQYLVVDDDTALTTTLGSCVAACLRDPVLKIGGMNHFLLPKGQVGDGAPTRYGS
YAMELLINDMLKRGAHRKRIEAKVFGGANVLKGFTSNPVGTRNAEFVRQYLQAEHIPIIAEDLCGIHPRKVWFFATTGRV
VVQRLPHAHEAEVAATESAVRARLSKAPVTGGVELFE

Specific function: Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis [H]

COG id: COG1871

COG function: function code NT; Chemotaxis protein; stimulates methylation of MCP proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CheD family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005659 [H]

Pfam domain/function: PF03975 CheD [H]

EC number: =3.5.1.44 [H]

Molecular weight: Translated: 21692; Mature: 21561

Theoretical pI: Translated: 9.17; Mature: 9.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTAVQVDDVMRYRDSRFQTIAAKLLPTQYLVVDDDTALTTTLGSCVAACLRDPVLKIGG
CCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHHCHHHHHCC
MNHFLLPKGQVGDGAPTRYGSYAMELLINDMLKRGAHRKRIEAKVFGGANVLKGFTSNPV
CCEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHEECCCHHHHCCCCCCCC
GTRNAEFVRQYLQAEHIPIIAEDLCGIHPRKVWFFATTGRVVVQRLPHAHEAEVAATESA
CCCCHHHHHHHHHHCCCCEEHHHHCCCCCCEEEEEECCHHHHHHHCCCCCHHHHHHHHHH
VRARLSKAPVTGGVELFE
HHHHHHCCCCCCCCEECC
>Mature Secondary Structure 
STAVQVDDVMRYRDSRFQTIAAKLLPTQYLVVDDDTALTTTLGSCVAACLRDPVLKIGG
CCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHHCHHHHHCC
MNHFLLPKGQVGDGAPTRYGSYAMELLINDMLKRGAHRKRIEAKVFGGANVLKGFTSNPV
CCEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHEECCCHHHHCCCCCCCC
GTRNAEFVRQYLQAEHIPIIAEDLCGIHPRKVWFFATTGRVVVQRLPHAHEAEVAATESA
CCCCHHHHHHHHHHCCCCEEHHHHCCCCCCEEEEEECCHHHHHHHCCCCCHHHHHHHHHH
VRARLSKAPVTGGVELFE
HHHHHHCCCCCCCCEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA