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The map label for this gene is regS [H]

Identifier: 78047384

GI number: 78047384

Start: 2064939

End: 2066165

Strand: Reverse

Name: regS [H]

Synonym: XCV1828

Alternate gene names: 78047384

Gene position: 2066165-2064939 (Counterclockwise)

Preceding gene: 78047387

Following gene: 78047383

Centisome position: 39.9

GC content: 67.4

Gene sequence:

>1227_bases
ATGAACAGCTCCGACGCTTCCTTCCTGCGGACCCTCTGCAGCCTGCGCTGGCTGGCCACCGCCGGCCAGGCCGCCACCAT
CCTGGTCGCCACCGGGCTGATGGGCCTGAACCTGCCGCAGCAACCCCTATGGGCCGGCGTAGCCGCGTTGGCGGTCTTCA
ACCTGTATGCGCAGCTGCGTGTGGCGCACCGCGGCGCGGTGAGCCCGGCCACCGAGTTCGGCCACATCCTGGTCGACGTG
ACGGTCCTGACCTGGATGGTGGGCTGGAGCGGTGGCATCGCCAACCCGTTCGGTTCGTTGTTCCTGGTGCTGATTGCGCT
GGCCGCATTGGCGCTGCCGCTGAGCTGGGCGATGGCGGTGGCGGCATCGTGCGTGGCCGGCTATGTGATCAGCGCAGCGT
TCGGGCTGCCGCTGCCTTATGGCGGCTTCGACCCGCTCAGCCTGCACATGTGGGGCATGGCGGCCAACTTCCTGCTGTCC
ACCGTGGTGGTGCTGGCGTTCGCGACACGGCTGGCTTTTTCCATGCGCGAGCGCGAACGCGAGATCTCCACCTTGCGTGA
GCGCTTTGCGCGCAACGAAGGCATCGTGGCGCTGGCCACGCACGCAGCGTCGGTGGCGCACGAATTAAACACGCCGCTGG
CCACCATGACCCTGCTGGTGGACGACATCGCCGACCAGTGCGAGCAAGGCGAATTGCGCGAAGACCTGGATACCTTGCGC
GAGCTGCTGGTGCAGTGCCACGAACGCGTCCTGGCCTTGGCGGCACCTGCCGACAACGGCCATCTGAGCCGCGAGGTGGC
CGTGAAAGAAGTGCTGGAACAATGGCGCCTGGTGCGCCCCACCATCGAACTGCGCCGCAACGAGGACGCGCCCATGCGCC
TGATGCTGCAGCCCGGCGTCAGCCACCTGCTGATGGTGTTGCTCAACAACGCCGCCGATGCGGGCGAACGTGTCGGGCGC
CCGCAGATCGATCTGACGCTGCGGGTGGAACACGACCATCTCAGCGGCGAAGTACGCGACTACGGACCCGGCTTCGACAC
CGCGCAAGCGATGCTGCCGGGCACGCTGTTCAATAGCGGCAAGCACGACGGCATGGGCGTGGGGTTGGCGCTCTCGCATG
CCACTGTCGAACGCCTGCAGGGCGAGTTGTGGATGCTGCCCGCCGAAGGCAGCGGCGCGCGCGTCGGTTTCCGTCTGCCC
CTCTCCGACCACGAGGCACTCGCATGA

Upstream 100 bases:

>100_bases
GGCGGCCAACGCATCTCATCTCAACGTGCATCACACGCTCCAGGCCGATGCGACGGTTTGTCGCAGGCCACCATCTTCCC
AAGCGCATAGCATTGCCGTG

Downstream 100 bases:

>100_bases
CAAGTCCCCCGATCCGTACCGGTCTGCTGGTCGACGACGACACATTGTACCTGCGCACGCTGCAACGCAGCCTTGCACGC
CGCGGCGTGGAAACGCTCAC

Product: two-component system sensor protein

Products: NA

Alternate protein names: Protein prrB [H]

Number of amino acids: Translated: 408; Mature: 408

Protein sequence:

>408_residues
MNSSDASFLRTLCSLRWLATAGQAATILVATGLMGLNLPQQPLWAGVAALAVFNLYAQLRVAHRGAVSPATEFGHILVDV
TVLTWMVGWSGGIANPFGSLFLVLIALAALALPLSWAMAVAASCVAGYVISAAFGLPLPYGGFDPLSLHMWGMAANFLLS
TVVVLAFATRLAFSMREREREISTLRERFARNEGIVALATHAASVAHELNTPLATMTLLVDDIADQCEQGELREDLDTLR
ELLVQCHERVLALAAPADNGHLSREVAVKEVLEQWRLVRPTIELRRNEDAPMRLMLQPGVSHLLMVLLNNAADAGERVGR
PQIDLTLRVEHDHLSGEVRDYGPGFDTAQAMLPGTLFNSGKHDGMGVGLALSHATVERLQGELWMLPAEGSGARVGFRLP
LSDHEALA

Sequences:

>Translated_408_residues
MNSSDASFLRTLCSLRWLATAGQAATILVATGLMGLNLPQQPLWAGVAALAVFNLYAQLRVAHRGAVSPATEFGHILVDV
TVLTWMVGWSGGIANPFGSLFLVLIALAALALPLSWAMAVAASCVAGYVISAAFGLPLPYGGFDPLSLHMWGMAANFLLS
TVVVLAFATRLAFSMREREREISTLRERFARNEGIVALATHAASVAHELNTPLATMTLLVDDIADQCEQGELREDLDTLR
ELLVQCHERVLALAAPADNGHLSREVAVKEVLEQWRLVRPTIELRRNEDAPMRLMLQPGVSHLLMVLLNNAADAGERVGR
PQIDLTLRVEHDHLSGEVRDYGPGFDTAQAMLPGTLFNSGKHDGMGVGLALSHATVERLQGELWMLPAEGSGARVGFRLP
LSDHEALA
>Mature_408_residues
MNSSDASFLRTLCSLRWLATAGQAATILVATGLMGLNLPQQPLWAGVAALAVFNLYAQLRVAHRGAVSPATEFGHILVDV
TVLTWMVGWSGGIANPFGSLFLVLIALAALALPLSWAMAVAASCVAGYVISAAFGLPLPYGGFDPLSLHMWGMAANFLLS
TVVVLAFATRLAFSMREREREISTLRERFARNEGIVALATHAASVAHELNTPLATMTLLVDDIADQCEQGELREDLDTLR
ELLVQCHERVLALAAPADNGHLSREVAVKEVLEQWRLVRPTIELRRNEDAPMRLMLQPGVSHLLMVLLNNAADAGERVGR
PQIDLTLRVEHDHLSGEVRDYGPGFDTAQAMLPGTLFNSGKHDGMGVGLALSHATVERLQGELWMLPAEGSGARVGFRLP
LSDHEALA

Specific function: Member of the two-component regulatory system RegB/RegA. Involved in the positive regulation of photosynthesis gene expression in response to anaerobiosis. Also involved in positive regulation of the cbbI and cbbII Calvin cycle CO2 fixation operons, as we

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 histidine kinase domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003594
- InterPro:   IPR004358
- InterPro:   IPR003661
- InterPro:   IPR005467
- InterPro:   IPR009082 [H]

Pfam domain/function: PF02518 HATPase_c; PF00512 HisKA [H]

EC number: =2.7.13.3 [H]

Molecular weight: Translated: 43996; Mature: 43996

Theoretical pI: Translated: 5.71; Mature: 5.71

Prosite motif: PS50109 HIS_KIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSSDASFLRTLCSLRWLATAGQAATILVATGLMGLNLPQQPLWAGVAALAVFNLYAQLR
CCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH
VAHRGAVSPATEFGHILVDVTVLTWMVGWSGGIANPFGSLFLVLIALAALALPLSWAMAV
HHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
AASCVAGYVISAAFGLPLPYGGFDPLSLHMWGMAANFLLSTVVVLAFATRLAFSMRERER
HHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EISTLRERFARNEGIVALATHAASVAHELNTPLATMTLLVDDIADQCEQGELREDLDTLR
HHHHHHHHHHCCCCEEEEHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHH
ELLVQCHERVLALAAPADNGHLSREVAVKEVLEQWRLVRPTIELRRNEDAPMRLMLQPGV
HHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHCCCCCCEEEEECCCH
SHLLMVLLNNAADAGERVGRPQIDLTLRVEHDHLSGEVRDYGPGFDTAQAMLPGTLFNSG
HHHHHHHHHCCCHHHHHCCCCCEEEEEEEECCCCCCCCCCCCCCCCHHHHHCCCHHHCCC
KHDGMGVGLALSHATVERLQGELWMLPAEGSGARVGFRLPLSDHEALA
CCCCCEEEHHHHHHHHHHHCCCEEEEECCCCCCEEEEECCCCCCCCCC
>Mature Secondary Structure
MNSSDASFLRTLCSLRWLATAGQAATILVATGLMGLNLPQQPLWAGVAALAVFNLYAQLR
CCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH
VAHRGAVSPATEFGHILVDVTVLTWMVGWSGGIANPFGSLFLVLIALAALALPLSWAMAV
HHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
AASCVAGYVISAAFGLPLPYGGFDPLSLHMWGMAANFLLSTVVVLAFATRLAFSMRERER
HHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EISTLRERFARNEGIVALATHAASVAHELNTPLATMTLLVDDIADQCEQGELREDLDTLR
HHHHHHHHHHCCCCEEEEHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHH
ELLVQCHERVLALAAPADNGHLSREVAVKEVLEQWRLVRPTIELRRNEDAPMRLMLQPGV
HHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHCCCCCCEEEEECCCH
SHLLMVLLNNAADAGERVGRPQIDLTLRVEHDHLSGEVRDYGPGFDTAQAMLPGTLFNSG
HHHHHHHHHCCCHHHHHCCCCCEEEEEEEECCCCCCCCCCCCCCCCHHHHHCCCHHHCCC
KHDGMGVGLALSHATVERLQGELWMLPAEGSGARVGFRLPLSDHEALA
CCCCCEEEHHHHHHHHHHHCCCEEEEECCCCCCEEEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7751278; 10358089 [H]