| Definition | Xanthomonas campestris pv. vesicatoria str. 85-10 chromosome, complete genome. |
|---|---|
| Accession | NC_007508 |
| Length | 5,178,466 |
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The map label for this gene is 78047367
Identifier: 78047367
GI number: 78047367
Start: 2043041
End: 2043475
Strand: Reverse
Name: 78047367
Synonym: XCV1811
Alternate gene names: NA
Gene position: 2043475-2043041 (Counterclockwise)
Preceding gene: 78047378
Following gene: 78047353
Centisome position: 39.46
GC content: 58.39
Gene sequence:
>435_bases ATGGAAGTGAAGGCAAAGCTGGCATTTAAGACCCTAGGCGCCGCCGCCATCGCGATGCTGGCGGTTACCGGTTCAGCAAG TGCATGCTGCCCAGGCGATGGAACAGTTGCCACGCTGGCTGCCACGGGCCTGGGCGCGTCCGTGCCCGACGCAACCAATC TTGCAGTAGATCCAACCTGGCGGATTTACGAATTTCAACGCGAGGGCATGCTGTATCTACAGATCAACGATGCAGCTGGC GTAGTGCGTGGCGCGGTTGGTCGCGCAGGCGAGGCTCTGTGGGTGCTGCCGATGGGTAAGGACGTCAATCGTGTGATGGT TTCGACGTTGACGGGACCAACGCTCGCAAAATTGGTTTATCAGACCGATAACTTCACGGTGCATCTCATCCCGGGCACTG CTGGAGAGCGCTGGATTGTCACACGGACAAAGTGA
Upstream 100 bases:
>100_bases ACTTTTGACTTAGTCACTCACGAAACTACGGAGAAACACGTACCGTAGGCATGCCTGAATTGCAGGCGAATGTTTCCCGT GAACGGGAGAAGGCGAAGTC
Downstream 100 bases:
>100_bases TCGAGACGGGCTCGGCGACTAGCAGACTCAGGGCTCGCGTATGGCGGCGGCGAAACATGCCGCCATGCGCTTTCAGTCGC GCCCGCAATTCGGCACCCGC
Product: putative secreted protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 144; Mature: 144
Protein sequence:
>144_residues MEVKAKLAFKTLGAAAIAMLAVTGSASACCPGDGTVATLAATGLGASVPDATNLAVDPTWRIYEFQREGMLYLQINDAAG VVRGAVGRAGEALWVLPMGKDVNRVMVSTLTGPTLAKLVYQTDNFTVHLIPGTAGERWIVTRTK
Sequences:
>Translated_144_residues MEVKAKLAFKTLGAAAIAMLAVTGSASACCPGDGTVATLAATGLGASVPDATNLAVDPTWRIYEFQREGMLYLQINDAAG VVRGAVGRAGEALWVLPMGKDVNRVMVSTLTGPTLAKLVYQTDNFTVHLIPGTAGERWIVTRTK >Mature_144_residues MEVKAKLAFKTLGAAAIAMLAVTGSASACCPGDGTVATLAATGLGASVPDATNLAVDPTWRIYEFQREGMLYLQINDAAG VVRGAVGRAGEALWVLPMGKDVNRVMVSTLTGPTLAKLVYQTDNFTVHLIPGTAGERWIVTRTK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15051; Mature: 15051
Theoretical pI: Translated: 8.73; Mature: 8.73
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEVKAKLAFKTLGAAAIAMLAVTGSASACCPGDGTVATLAATGLGASVPDATNLAVDPTW CCCCHHHHHHHHHHHHEEEEEECCCCCEECCCCCCEEEEEECCCCCCCCCCCCEEECCCE RIYEFQREGMLYLQINDAAGVVRGAVGRAGEALWVLPMGKDVNRVMVSTLTGPTLAKLVY EEEEEECCCEEEEEECCCCCHHHHCCCCCCCEEEEEECCCCCCEEEEECCCCCHHEEEEE QTDNFTVHLIPGTAGERWIVTRTK ECCCEEEEEEECCCCCEEEEEECC >Mature Secondary Structure MEVKAKLAFKTLGAAAIAMLAVTGSASACCPGDGTVATLAATGLGASVPDATNLAVDPTW CCCCHHHHHHHHHHHHEEEEEECCCCCEECCCCCCEEEEEECCCCCCCCCCCCEEECCCE RIYEFQREGMLYLQINDAAGVVRGAVGRAGEALWVLPMGKDVNRVMVSTLTGPTLAKLVY EEEEEECCCEEEEEECCCCCHHHHCCCCCCCEEEEEECCCCCCEEEEECCCCCHHEEEEE QTDNFTVHLIPGTAGERWIVTRTK ECCCEEEEEEECCCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA