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The map label for this gene is dgoK [H]

Identifier: 78047350

GI number: 78047350

Start: 2014283

End: 2015161

Strand: Reverse

Name: dgoK [H]

Synonym: XCV1794

Alternate gene names: 78047350

Gene position: 2015161-2014283 (Counterclockwise)

Preceding gene: 78047351

Following gene: 78047349

Centisome position: 38.91

GC content: 68.94

Gene sequence:

>879_bases
ATGATCGCCATCGATTGGGGCACCAGTAGCCTGCGTGGCTATCTGCTCGATGCCGACGGCAAGGTCGTTGCGCAGCGCCG
CGGTAGCGACGGCATCCTGGCCTGCCAGGGCCGCTTCGACGCAGTGCTGGCTGGCCTGGTCGACGGCTGGGACGGCCCAC
TGCTGCTCTCGGGCATGATCGGCAGCCGCAATGGCTGGGTCGAGCAACCTTACCTGCCCTGCCCGGCCGACACCGCCGCG
CTCGCCCAGGCGATGCGCTGCTACGACGCCCTGTTGCCCGGCCGCGCACTGTGGTTCGTGCCCGGCGTCAGCACCGGCGA
ACAGGCCGGCGTGCCCGATGTGATGCGTGGCGAAGAAACCCAACTGGTCGGGCTGATCGCCGCGCTCGGCGACGGCGCGC
ATGTCGCCTGCCTGCCCGGCACGCACAGCAAATGGGCGCAGATCGCCAACGGCCAGCTGACGGGTTTTGCCACCGTCATG
ACCGGCGAGTTGTACGCCGTGCTGCGTCAGCACAGCATCCTGGGCAAGCTGATGGACGACGATCATGCCGCGCTGGACGC
TGACGCATTCCTCCAAGGTGTCGACCGCAGCAACGACCCCGGCGGCCTCAGCCACCACCTGTTCGGCACCCGCACGCTCG
GCCTGTTCGAACGCCTGTCCTCCGCGGCGCTGCCGTCCTACCTCTCGGGCGTGCTGATCGGCCACGAACTGCGCGCGCAC
CGCGGCGCTCACGCCATCGTGCATCTGGTCGGCAGCCCTGCTCTGGCGCAACGCTACGCATTGGCACTGCAGCACCTGGG
CGTCGAAAGCCGACTGCATCCGGAAGATCTGGCTGCGGCAGGGTTGTTCGCGCTGGCCAGGCAGCGCGGACTGGCCTGA

Upstream 100 bases:

>100_bases
ACCATAGCGCCGACGAACTCGCGCGCATGCCCGAAGCCGGCAGCCTGTTTGTCTGCGACCTCGCCATCGCGGGCCTGCCC
GAAAGCCGGGTGGCGAGCGC

Downstream 100 bases:

>100_bases
CAGCCCGGCACGAAAAGCGCCAACAACTCCACACCCATCACGCGACTGCTTTAGAATTGGAAGGCTAAACGCCGGATTCC
GCCATGCCTTTTGTTGTCAC

Product: putative 2-oxo-3-deoxygalactonate kinase

Products: NA

Alternate protein names: 2-keto-3-deoxy-galactonokinase; 2-oxo-3-deoxygalactonate kinase [H]

Number of amino acids: Translated: 292; Mature: 292

Protein sequence:

>292_residues
MIAIDWGTSSLRGYLLDADGKVVAQRRGSDGILACQGRFDAVLAGLVDGWDGPLLLSGMIGSRNGWVEQPYLPCPADTAA
LAQAMRCYDALLPGRALWFVPGVSTGEQAGVPDVMRGEETQLVGLIAALGDGAHVACLPGTHSKWAQIANGQLTGFATVM
TGELYAVLRQHSILGKLMDDDHAALDADAFLQGVDRSNDPGGLSHHLFGTRTLGLFERLSSAALPSYLSGVLIGHELRAH
RGAHAIVHLVGSPALAQRYALALQHLGVESRLHPEDLAAAGLFALARQRGLA

Sequences:

>Translated_292_residues
MIAIDWGTSSLRGYLLDADGKVVAQRRGSDGILACQGRFDAVLAGLVDGWDGPLLLSGMIGSRNGWVEQPYLPCPADTAA
LAQAMRCYDALLPGRALWFVPGVSTGEQAGVPDVMRGEETQLVGLIAALGDGAHVACLPGTHSKWAQIANGQLTGFATVM
TGELYAVLRQHSILGKLMDDDHAALDADAFLQGVDRSNDPGGLSHHLFGTRTLGLFERLSSAALPSYLSGVLIGHELRAH
RGAHAIVHLVGSPALAQRYALALQHLGVESRLHPEDLAAAGLFALARQRGLA
>Mature_292_residues
MIAIDWGTSSLRGYLLDADGKVVAQRRGSDGILACQGRFDAVLAGLVDGWDGPLLLSGMIGSRNGWVEQPYLPCPADTAA
LAQAMRCYDALLPGRALWFVPGVSTGEQAGVPDVMRGEETQLVGLIAALGDGAHVACLPGTHSKWAQIANGQLTGFATVM
TGELYAVLRQHSILGKLMDDDHAALDADAFLQGVDRSNDPGGLSHHLFGTRTLGLFERLSSAALPSYLSGVLIGHELRAH
RGAHAIVHLVGSPALAQRYALALQHLGVESRLHPEDLAAAGLFALARQRGLA

Specific function: D-galactonate degradation; second step. [C]

COG id: COG3734

COG function: function code G; 2-keto-3-deoxy-galactonokinase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1790128, Length=276, Percent_Identity=34.4202898550725, Blast_Score=129, Evalue=2e-31,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007729 [H]

Pfam domain/function: PF05035 DGOK [H]

EC number: =2.7.1.58 [H]

Molecular weight: Translated: 30733; Mature: 30733

Theoretical pI: Translated: 6.37; Mature: 6.37

Prosite motif: PS00196 COPPER_BLUE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIAIDWGTSSLRGYLLDADGKVVAQRRGSDGILACQGRFDAVLAGLVDGWDGPLLLSGMI
CEEEECCCCCCCEEEECCCCEEEEEECCCCCEEEECCHHHHHHHHHHCCCCCCEEEEECC
GSRNGWVEQPYLPCPADTAALAQAMRCYDALLPGRALWFVPGVSTGEQAGVPDVMRGEET
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCHHHCCCHH
QLVGLIAALGDGAHVACLPGTHSKWAQIANGQLTGFATVMTGELYAVLRQHSILGKLMDD
HHHHHHHHHCCCCEEEEECCCCHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHCC
DHAALDADAFLQGVDRSNDPGGLSHHLFGTRTLGLFERLSSAALPSYLSGVLIGHELRAH
CCHHCCHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RGAHAIVHLVGSPALAQRYALALQHLGVESRLHPEDLAAAGLFALARQRGLA
CCCCEEEEECCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MIAIDWGTSSLRGYLLDADGKVVAQRRGSDGILACQGRFDAVLAGLVDGWDGPLLLSGMI
CEEEECCCCCCCEEEECCCCEEEEEECCCCCEEEECCHHHHHHHHHHCCCCCCEEEEECC
GSRNGWVEQPYLPCPADTAALAQAMRCYDALLPGRALWFVPGVSTGEQAGVPDVMRGEET
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCHHHCCCHH
QLVGLIAALGDGAHVACLPGTHSKWAQIANGQLTGFATVMTGELYAVLRQHSILGKLMDD
HHHHHHHHHCCCCEEEEECCCCHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHCC
DHAALDADAFLQGVDRSNDPGGLSHHLFGTRTLGLFERLSSAALPSYLSGVLIGHELRAH
CCHHCCHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RGAHAIVHLVGSPALAQRYALALQHLGVESRLHPEDLAAAGLFALARQRGLA
CCCCEEEEECCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7686882; 9278503 [H]