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The map label for this gene is 78046853

Identifier: 78046853

GI number: 78046853

Start: 1455430

End: 1455696

Strand: Reverse

Name: 78046853

Synonym: XCV1297

Alternate gene names: NA

Gene position: 1455696-1455430 (Counterclockwise)

Preceding gene: 78046856

Following gene: 78046852

Centisome position: 28.11

GC content: 62.55

Gene sequence:

>267_bases
ATGAAGAAGTCCCGCTTTACCGACAGCCAGATCATCGCCGTGCTCAAGCAGGCCCAGGCCGGTGCGCCCGTGCCGGAGCT
GTGCCGCGAGCACGGCATCAGCTCGGCCACGTTCTACAAGTGGCGCAGCAAGTTCGGCGGCATGGACGTGTCCATGGTCG
CGCGCATGAAGGAGCTGGAGGAGGAGAACCGCCGGCTCAAGAAGATGTACGCCGAGGCGCAGCTCAGTACCGACCTGCTG
AAGGAAGCGCTCGCAAAAAAATGGTGA

Upstream 100 bases:

>100_bases
AGGAGGCTGACATGTCGCCGGCATGTGAAATGGTAATCCCCCCGCCCATTAGCAGACGCCAGAAGTGGAATTTTCTCGTA
CCCTTTCTCGAGGAGGTTCC

Downstream 100 bases:

>100_bases
GGCCATCTCAGCGACGCGAGATGGCCCAATCGGCAGTCACGAGCGGGCGTACGAACATCCGCCACGCCTGCCAGGCCTTC
GCGGTGAGCGAGACCTGCTT

Product: ISxac2 transposase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 88; Mature: 88

Protein sequence:

>88_residues
MKKSRFTDSQIIAVLKQAQAGAPVPELCREHGISSATFYKWRSKFGGMDVSMVARMKELEEENRRLKKMYAEAQLSTDLL
KEALAKKW

Sequences:

>Translated_88_residues
MKKSRFTDSQIIAVLKQAQAGAPVPELCREHGISSATFYKWRSKFGGMDVSMVARMKELEEENRRLKKMYAEAQLSTDLL
KEALAKKW
>Mature_88_residues
MKKSRFTDSQIIAVLKQAQAGAPVPELCREHGISSATFYKWRSKFGGMDVSMVARMKELEEENRRLKKMYAEAQLSTDLL
KEALAKKW

Specific function: Unknown

COG id: COG2801

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transposase 8 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR002514 [H]

Pfam domain/function: PF01527 Transposase_8 [H]

EC number: NA

Molecular weight: Translated: 10094; Mature: 10094

Theoretical pI: Translated: 10.32; Mature: 10.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
5.7 %Met     (Translated Protein)
6.8 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
5.7 %Met     (Mature Protein)
6.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKSRFTDSQIIAVLKQAQAGAPVPELCREHGISSATFYKWRSKFGGMDVSMVARMKELE
CCCCCCCHHHHHHHHHHHHCCCCHHHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHHHHH
EENRRLKKMYAEAQLSTDLLKEALAKKW
HHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKKSRFTDSQIIAVLKQAQAGAPVPELCREHGISSATFYKWRSKFGGMDVSMVARMKELE
CCCCCCCHHHHHHHHHHHHCCCCHHHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHHHHH
EENRRLKKMYAEAQLSTDLLKEALAKKW
HHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2544911 [H]