Click here to switch to the map view.

The map label for this gene is yebA [H]

Identifier: 78046688

GI number: 78046688

Start: 1261730

End: 1263682

Strand: Reverse

Name: yebA [H]

Synonym: XCV1132

Alternate gene names: 78046688

Gene position: 1263682-1261730 (Counterclockwise)

Preceding gene: 78046689

Following gene: 78046687

Centisome position: 24.4

GC content: 67.64

Gene sequence:

>1953_bases
ATGACTGAGCCCTTGCTCCCGATCAGCCAGGCCAGCCGCGCCTGGGTACTGGCCACCAGTTGGCTGGCCTTGACCCCGCT
GCTGTTGCAGTTGCCCGGCCTGCTTGCGGCCACTGTCGCGGTGGCGGCGGTGCTGGTCGGCGTGCTGAGCTGGCGCGGCA
CCTTGATGGCGCCGGTGCGGCTGTTGTTGGTGATCGCAATGCTGGCAGCGGTGTATTGGCAGATCGGCATGCGCTTTGGC
CGCGACACCGGCTGCGCGGTGCTGGCATCGATGCTGGCGATCAAGGCCTCCGAACTGCGCACCTTGCGCGATGCCCGCAG
CCTGTTGGGTTTTGCGTTGTTCGCACCGTTTGCCGCCTTTCTGCTCGACCAGGGCCCGGCAACGATGGGCCTGGCATTGT
TGGCGGTGGTCAGCGCCTTGCTGAGCATGCAGCGGCTGGCCGACGAAGAACAGCACACCGCCACGCCGGCCCTGCGCCTG
CAATTGCGCAGTATGGGCAAGCTGGTTGCCATCGGCGTGCCGCTGGCGCTGGCCACGTTCTGGTTGCTGCCGCGGCTGAG
TGCGCCGCTGTGGGGCGTGCCCGAGCGCGCGCTATCCCGGCCTGGCCTGTCGGACAACATGTCGCCGGGCGAATGGATCG
ACCTGATGGCCGACGACAGCCCGGCCTTGCGCGTGCAATTTGCCGGCAAGGCGCCGCCGCCGCAACAGCGCTACTGGCGC
GGCCCGGTGATGTGGGACTTCGACGGCCGCACCTGGCAGCGCGCGCACTGGACCGGCCGCGGTCAGCCCGCTTCGGTCAC
CGCAGGTCCGCAAACCTACCGTTATCGCCTGGATTACGAGCCCACCGATCGCCGCCAGCTGGTGTCGCTGGATCTGCCTA
CCCAGGGCGTGCCCAACGCCGAGTTATCGCCGGACTACGAACTGTTCGCGCAACGGCCGTTGAGCGCACTGACGCGCTGG
GACCTGCAATCGGCGCCGCCAACACGCTTCGATACCGACCTGCCCGACCAGTTGCGCAAGCGTGCACTTGCCCTGCCGCC
CGGTTTCAATCCGCGTACGCTGACGCTGGCACGGCAATGGCGTGGCGAGGCCGGCAACAACGACGATGCGGTGGTGCAGC
GCGCACTGCAGTGGATCACCCGAGAATTCGCCTACACGCTGGACACGCCGCTGCTCGGCCGCAACAGCGTCGACGAGTTC
CTGTTTCAGCAAAAGGCCGGTTTCTGCGAACACTTCAGCTCCTCGTTCGTGGTGCTGATGCGCGCGGCCGGCATCCCGGC
GCGCGTGGTGACCGGGTATGCCGGCGGCACATACAACCGGTTGGGCAATTATTGGGTGGTACGCCGCATGGACGCGCACG
CCTGGACCGAAGTCTGGCTGGCCGGGCGTGGCTGGGTTCGCGTGGACCCCACCGCCGCAGTGGCGCCGGAACGCATCTAC
GACACCCTCGAAGATCGCCTGCAAGCCGGCGGCGGCAACGACTTCGCCGACCTCGGCACATGGGCCAGCCTGGGCCAGGT
CAGCGACTGGCTGCGGCGCGGCTGGAACGAGCTAGTGCTGTCCTTCGATGCCGACCGTCAGCAACGGCTGCTGCAACCCT
TGGGCATCGATCGCCTGGACACCTCGCAGCTGGCCGCCATCTTCGGCGTGTTCGCGGTAAGCGCGCTGGCGTGGATGGGC
TGGCTGCTGGCACGTGGCGAACGTGAGCGCGACCCGTTGCTGCGCGCCTGGCACCGGCTGAGCCGCCGCTACCGCAAGCT
CGGCCTTGCCCGTGAACCGCACGAACCGGCCGGTGTGTGGGCGCAACGTGTCGCCCGCTCACACCCGAATACGGCACTGT
TGGCACTCAGCCAACGTTTCGCTGCCGCGCGATACGCTGGCGCTGATTCGGACAGCGCCACTCTCTTGAAAGACTTGCTG
CAGCATCGCCCGCGAACCGGAGCTTCCTCATGA

Upstream 100 bases:

>100_bases
CGCCGGTATCGCCTGCTGTTGCCTGGCCAGCCACCGTTAGGTCCCGCGCAAGGATCTTCGCACCACCACCTGTGCCAACG
CGCCCTGGCCCTGCTTCCGC

Downstream 100 bases:

>100_bases
TTACCCGTTTTCTTGTTCCTCTTATCGCTGTGCTCGGGCTCGCAGCCTGCGCCACCGCACCCAAGCCGCTGCAGGGCCAG
TTCCCCGCGGTCAGTCCGAG

Product: putative transglutaminase-like superfamily protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 650; Mature: 649

Protein sequence:

>650_residues
MTEPLLPISQASRAWVLATSWLALTPLLLQLPGLLAATVAVAAVLVGVLSWRGTLMAPVRLLLVIAMLAAVYWQIGMRFG
RDTGCAVLASMLAIKASELRTLRDARSLLGFALFAPFAAFLLDQGPATMGLALLAVVSALLSMQRLADEEQHTATPALRL
QLRSMGKLVAIGVPLALATFWLLPRLSAPLWGVPERALSRPGLSDNMSPGEWIDLMADDSPALRVQFAGKAPPPQQRYWR
GPVMWDFDGRTWQRAHWTGRGQPASVTAGPQTYRYRLDYEPTDRRQLVSLDLPTQGVPNAELSPDYELFAQRPLSALTRW
DLQSAPPTRFDTDLPDQLRKRALALPPGFNPRTLTLARQWRGEAGNNDDAVVQRALQWITREFAYTLDTPLLGRNSVDEF
LFQQKAGFCEHFSSSFVVLMRAAGIPARVVTGYAGGTYNRLGNYWVVRRMDAHAWTEVWLAGRGWVRVDPTAAVAPERIY
DTLEDRLQAGGGNDFADLGTWASLGQVSDWLRRGWNELVLSFDADRQQRLLQPLGIDRLDTSQLAAIFGVFAVSALAWMG
WLLARGERERDPLLRAWHRLSRRYRKLGLAREPHEPAGVWAQRVARSHPNTALLALSQRFAAARYAGADSDSATLLKDLL
QHRPRTGASS

Sequences:

>Translated_650_residues
MTEPLLPISQASRAWVLATSWLALTPLLLQLPGLLAATVAVAAVLVGVLSWRGTLMAPVRLLLVIAMLAAVYWQIGMRFG
RDTGCAVLASMLAIKASELRTLRDARSLLGFALFAPFAAFLLDQGPATMGLALLAVVSALLSMQRLADEEQHTATPALRL
QLRSMGKLVAIGVPLALATFWLLPRLSAPLWGVPERALSRPGLSDNMSPGEWIDLMADDSPALRVQFAGKAPPPQQRYWR
GPVMWDFDGRTWQRAHWTGRGQPASVTAGPQTYRYRLDYEPTDRRQLVSLDLPTQGVPNAELSPDYELFAQRPLSALTRW
DLQSAPPTRFDTDLPDQLRKRALALPPGFNPRTLTLARQWRGEAGNNDDAVVQRALQWITREFAYTLDTPLLGRNSVDEF
LFQQKAGFCEHFSSSFVVLMRAAGIPARVVTGYAGGTYNRLGNYWVVRRMDAHAWTEVWLAGRGWVRVDPTAAVAPERIY
DTLEDRLQAGGGNDFADLGTWASLGQVSDWLRRGWNELVLSFDADRQQRLLQPLGIDRLDTSQLAAIFGVFAVSALAWMG
WLLARGERERDPLLRAWHRLSRRYRKLGLAREPHEPAGVWAQRVARSHPNTALLALSQRFAAARYAGADSDSATLLKDLL
QHRPRTGASS
>Mature_649_residues
TEPLLPISQASRAWVLATSWLALTPLLLQLPGLLAATVAVAAVLVGVLSWRGTLMAPVRLLLVIAMLAAVYWQIGMRFGR
DTGCAVLASMLAIKASELRTLRDARSLLGFALFAPFAAFLLDQGPATMGLALLAVVSALLSMQRLADEEQHTATPALRLQ
LRSMGKLVAIGVPLALATFWLLPRLSAPLWGVPERALSRPGLSDNMSPGEWIDLMADDSPALRVQFAGKAPPPQQRYWRG
PVMWDFDGRTWQRAHWTGRGQPASVTAGPQTYRYRLDYEPTDRRQLVSLDLPTQGVPNAELSPDYELFAQRPLSALTRWD
LQSAPPTRFDTDLPDQLRKRALALPPGFNPRTLTLARQWRGEAGNNDDAVVQRALQWITREFAYTLDTPLLGRNSVDEFL
FQQKAGFCEHFSSSFVVLMRAAGIPARVVTGYAGGTYNRLGNYWVVRRMDAHAWTEVWLAGRGWVRVDPTAAVAPERIYD
TLEDRLQAGGGNDFADLGTWASLGQVSDWLRRGWNELVLSFDADRQQRLLQPLGIDRLDTSQLAAIFGVFAVSALAWMGW
LLARGERERDPLLRAWHRLSRRYRKLGLAREPHEPAGVWAQRVARSHPNTALLALSQRFAAARYAGADSDSATLLKDLLQ
HRPRTGASS

Specific function: Unknown

COG id: COG1305

COG function: function code E; Transglutaminase-like enzymes, putative cysteine proteases

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002931 [H]

Pfam domain/function: PF01841 Transglut_core [H]

EC number: NA

Molecular weight: Translated: 72097; Mature: 71965

Theoretical pI: Translated: 10.30; Mature: 10.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTEPLLPISQASRAWVLATSWLALTPLLLQLPGLLAATVAVAAVLVGVLSWRGTLMAPVR
CCCCCCCHHHCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
LLLVIAMLAAVYWQIGMRFGRDTGCAVLASMLAIKASELRTLRDARSLLGFALFAPFAAF
HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLDQGPATMGLALLAVVSALLSMQRLADEEQHTATPALRLQLRSMGKLVAIGVPLALATF
HHCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHCCHHHHHHHHHCCCEEEEHHHHHHHHH
WLLPRLSAPLWGVPERALSRPGLSDNMSPGEWIDLMADDSPALRVQFAGKAPPPQQRYWR
HHHHHHCCCCCCCCHHHHCCCCCCCCCCCCCEEEEEECCCCCEEEEECCCCCCCHHHHCC
GPVMWDFDGRTWQRAHWTGRGQPASVTAGPQTYRYRLDYEPTDRRQLVSLDLPTQGVPNA
CCEEECCCCCCEECCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCEEEEECCCCCCCCCC
ELSPDYELFAQRPLSALTRWDLQSAPPTRFDTDLPDQLRKRALALPPGFNPRTLTLARQW
CCCCCHHHHHHCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCEEHHHHHH
RGEAGNNDDAVVQRALQWITREFAYTLDTPLLGRNSVDEFLFQQKAGFCEHFSSSFVVLM
CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHH
RAAGIPARVVTGYAGGTYNRLGNYWVVRRMDAHAWTEVWLAGRGWVRVDPTAAVAPERIY
HHCCCCHHHEECCCCCCHHHCCCEEEEEECCHHHHHHHHCCCCCEEEECCHHHCCHHHHH
DTLEDRLQAGGGNDFADLGTWASLGQVSDWLRRGWNELVLSFDADRQQRLLQPLGIDRLD
HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCHHHEEEECCCHHHHHHHHHCCCCCCC
TSQLAAIFGVFAVSALAWMGWLLARGERERDPLLRAWHRLSRRYRKLGLAREPHEPAGVW
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHH
AQRVARSHPNTALLALSQRFAAARYAGADSDSATLLKDLLQHRPRTGASS
HHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
TEPLLPISQASRAWVLATSWLALTPLLLQLPGLLAATVAVAAVLVGVLSWRGTLMAPVR
CCCCCCHHHCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
LLLVIAMLAAVYWQIGMRFGRDTGCAVLASMLAIKASELRTLRDARSLLGFALFAPFAAF
HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLDQGPATMGLALLAVVSALLSMQRLADEEQHTATPALRLQLRSMGKLVAIGVPLALATF
HHCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHCCHHHHHHHHHCCCEEEEHHHHHHHHH
WLLPRLSAPLWGVPERALSRPGLSDNMSPGEWIDLMADDSPALRVQFAGKAPPPQQRYWR
HHHHHHCCCCCCCCHHHHCCCCCCCCCCCCCEEEEEECCCCCEEEEECCCCCCCHHHHCC
GPVMWDFDGRTWQRAHWTGRGQPASVTAGPQTYRYRLDYEPTDRRQLVSLDLPTQGVPNA
CCEEECCCCCCEECCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCEEEEECCCCCCCCCC
ELSPDYELFAQRPLSALTRWDLQSAPPTRFDTDLPDQLRKRALALPPGFNPRTLTLARQW
CCCCCHHHHHHCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCEEHHHHHH
RGEAGNNDDAVVQRALQWITREFAYTLDTPLLGRNSVDEFLFQQKAGFCEHFSSSFVVLM
CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHH
RAAGIPARVVTGYAGGTYNRLGNYWVVRRMDAHAWTEVWLAGRGWVRVDPTAAVAPERIY
HHCCCCHHHEECCCCCCHHHCCCEEEEEECCHHHHHHHHCCCCCEEEECCHHHCCHHHHH
DTLEDRLQAGGGNDFADLGTWASLGQVSDWLRRGWNELVLSFDADRQQRLLQPLGIDRLD
HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCHHHEEEECCCHHHHHHHHHCCCCCCC
TSQLAAIFGVFAVSALAWMGWLLARGERERDPLLRAWHRLSRRYRKLGLAREPHEPAGVW
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHH
AQRVARSHPNTALLALSQRFAAARYAGADSDSATLLKDLLQHRPRTGASS
HHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8969499; 9384377 [H]