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The map label for this gene is slp [H]

Identifier: 78046687

GI number: 78046687

Start: 1261200

End: 1261733

Strand: Reverse

Name: slp [H]

Synonym: XCV1131

Alternate gene names: 78046687

Gene position: 1261733-1261200 (Counterclockwise)

Preceding gene: 78046688

Following gene: 78046682

Centisome position: 24.36

GC content: 66.29

Gene sequence:

>534_bases
ATGATTACCCGTTTTCTTGTTCCTCTTATCGCTGTGCTCGGGCTCGCAGCCTGCGCCACCGCACCCAAGCCGCTGCAGGG
CCAGTTCCCCGCGGTCAGTCCGAGTGATTCAACTGCCAGCGCCCAGGTCGGCACGTCCGTGCGCTGGGGTGGCAAGATCA
TCAAGACCACGCCTGGCCAGGGCCAGACCTGCTTCGAGCTGATCTCGCGCCCGCTCAATGCCAGCGGTCGCCCCGACCGT
AATGCCGTGGATGCCAGCGATGGCCGCTTCCTGGCCTGCCGCTCGGGCTTCTACGATCCGGCGGTGTTCGAGCCGGGGCG
CGAAGTGACCTTCATCGGCAAGATCGAAGGCTACGAAACCACCAAGATCGGCGAATACGACTACAAGCTGCCCAAGGTCA
ATGCCGACGTGGTCTACCTGTGGCCGGTCGTGCGCGACGTGGAAGTCGTGCCGGCTTACCCGTATGGCCCGTGGGGCGAC
CCGTGGGGCCCGCGCTGGGGCGGCGGTTGGGGCTGGGGCCGCGGCTGGTGGTAA

Upstream 100 bases:

>100_bases
GCCAACGTTTCGCTGCCGCGCGATACGCTGGCGCTGATTCGGACAGCGCCACTCTCTTGAAAGACTTGCTGCAGCATCGC
CCGCGAACCGGAGCTTCCTC

Downstream 100 bases:

>100_bases
TGCGCCGCTGAGCTGGGTTACTCGCAAAAACGCCGCTCGCAGGGAGCGGCGTTTTTGTTTGTGCACGACGATCGATGCAT
GACGCGGCTTGCGCGCAACG

Product: Slp family outer membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 177; Mature: 177

Protein sequence:

>177_residues
MITRFLVPLIAVLGLAACATAPKPLQGQFPAVSPSDSTASAQVGTSVRWGGKIIKTTPGQGQTCFELISRPLNASGRPDR
NAVDASDGRFLACRSGFYDPAVFEPGREVTFIGKIEGYETTKIGEYDYKLPKVNADVVYLWPVVRDVEVVPAYPYGPWGD
PWGPRWGGGWGWGRGWW

Sequences:

>Translated_177_residues
MITRFLVPLIAVLGLAACATAPKPLQGQFPAVSPSDSTASAQVGTSVRWGGKIIKTTPGQGQTCFELISRPLNASGRPDR
NAVDASDGRFLACRSGFYDPAVFEPGREVTFIGKIEGYETTKIGEYDYKLPKVNADVVYLWPVVRDVEVVPAYPYGPWGD
PWGPRWGGGWGWGRGWW
>Mature_177_residues
MITRFLVPLIAVLGLAACATAPKPLQGQFPAVSPSDSTASAQVGTSVRWGGKIIKTTPGQGQTCFELISRPLNASGRPDR
NAVDASDGRFLACRSGFYDPAVFEPGREVTFIGKIEGYETTKIGEYDYKLPKVNADVVYLWPVVRDVEVVPAYPYGPWGD
PWGPRWGGGWGWGRGWW

Specific function: The induction of slp may help to stabilize the outer membrane during carbon starvation and stationary phase [H]

COG id: COG3065

COG function: function code M; Starvation-inducible outer membrane lipoprotein

Gene ontology:

Cell location: Cell outer membrane; Lipid-anchor [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87082278, Length=163, Percent_Identity=31.2883435582822, Blast_Score=70, Evalue=1e-13,
Organism=Escherichia coli, GI1788108, Length=150, Percent_Identity=32, Blast_Score=67, Evalue=5e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004658 [H]

Pfam domain/function: PF03843 Slp [H]

EC number: NA

Molecular weight: Translated: 19292; Mature: 19292

Theoretical pI: Translated: 8.44; Mature: 8.44

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MITRFLVPLIAVLGLAACATAPKPLQGQFPAVSPSDSTASAQVGTSVRWGGKIIKTTPGQ
CCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCEEEEECCCC
GQTCFELISRPLNASGRPDRNAVDASDGRFLACRSGFYDPAVFEPGREVTFIGKIEGYET
CHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCEECCCCCEEEEEEECCCCC
TKIGEYDYKLPKVNADVVYLWPVVRDVEVVPAYPYGPWGDPWGPRWGGGWGWGRGWW
EECCCCCCCCCCCCCCEEEEEECCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MITRFLVPLIAVLGLAACATAPKPLQGQFPAVSPSDSTASAQVGTSVRWGGKIIKTTPGQ
CCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCEEEEECCCC
GQTCFELISRPLNASGRPDRNAVDASDGRFLACRSGFYDPAVFEPGREVTFIGKIEGYET
CHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCEECCCCCEEEEEEECCCCC
TKIGEYDYKLPKVNADVVYLWPVVRDVEVVPAYPYGPWGDPWGPRWGGGWGWGRGWW
EECCCCCCCCCCCCCCEEEEEECCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8022277; 8041620; 9278503 [H]