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The map label for this gene is 78046682

Identifier: 78046682

GI number: 78046682

Start: 1255730

End: 1257247

Strand: Reverse

Name: 78046682

Synonym: XCV1126

Alternate gene names: NA

Gene position: 1257247-1255730 (Counterclockwise)

Preceding gene: 78046687

Following gene: 78046681

Centisome position: 24.28

GC content: 63.83

Gene sequence:

>1518_bases
ATGCGCATTCCTCATCATCTCGTTCGAGCCCCCTTCGGACTCTGGTCCTACCGACAGCGTGTGCCGGTCGATTTGCAGCC
CATTGTGGGTCGCCAGACCTTCAAACGCACCCTGCACACCTACGACATGCGCGAGGCAAGACTGCGCGCGCTGACCCTGG
CCGCCCGCTATGCTCAGGTCTTCACTGTGTTGAAGGAACGACGCATGCAAAGCCAAGACGACGACCTGGACGCGCTTCTG
GCGCGCCTGACCGGCACCCAACGCCCGCAGGAGCTGACCCTAAATCGGACGCGCTCGGCGGACGGGTCGATCACCGAGCA
ATGGCAGATCGACACCCCAGAGGACGTCACACTCTTCCAGCAGCTGATGGCGCTCACCGCCCCGCAGCCCAGCGCGCTGG
GGGAGCTGATTCAACAGCACGTGCCGCCTCTCCCCACGCCGAGGCGGGTAACCAAACCTTCCCTCGAATCAATCACGCTC
GGGAAGGCCCGAGACGCCTGGCTGAACAGCCTCAAGGGCAGCACCCTGCCCAAGACCTGGACCATCAAGCGGACCGCCGT
CGAACTGTTGACCAGCTTCTTGGGCGAGAAGACCAAGCTGCACACGGTCACCCGCTCGGACTTGGCGCGTTGGTATCAGG
ACATGCGGGAAAAAGGCGCTTCTACACCCACGCTCACCAACAAGCAGTCCTACATCGGCGGCAAGGGCGGGTTCTTCGAG
TGGGCCCAAGCCTCCGGCCACTACCCTCGGGGCGACAACCCCGCGTCCGGGCACGTGAGCTATTCGACCCGGGAAAAGCG
CGCCCGGCGGAAGTTCGGGTTCAAGGCTTACGACGCCCACCAAGTCCAAGCGCTGTTTGCCCCGGCTGCTTTTGAGGCGC
TGCCCCTGGCCGCGCGGTGGGCTTCCCTCATTGGCTTGTATACCGGCGCCCGCGCTTCGGAGGTCGGCCAGCTGCTGACT
GCCGACGTAGTGGAAGAGGGCGGTATCCCTTGCTTCCAGATTTCGGACGAGGGCGAGCATCAGAAGGTGAAGACGGACAA
GAGCTTGAGGACCGTGCCGATTCACCCCGACCTCCTCGCCCTGGGCTTCCTGACCTGGGTGGAGCAGGCGCGCGCCGAGG
GGCAGGAGCGTTTGTTCCCTGCGGCCAAAGCCGATGCCAAAAATGGTCAAGGCAACTGGATTTCCAAAGCGTTTAGCCGG
CACCTGGCCGAGGTGGGCAAGAACTGGCCCACGGCCAAGCGCGGCTTTCACTCACTGCGCAAAACCCTGATTCAAGAGTT
GCAAGGCGCCGGCGTGGTGTCCGAGCTCCGGGCTCAATTGGTCGGCCACGAGTTGGACGACGAGCACCACGTCACTTACA
GCCGGGCTTTCACCGCCAAGGAAAAGCTGGACGGGCTCCGGGGCGTGTCGCCTGGGCTATCCGTGCTGGCTTACGGACTC
AGCCTCGACGCGATTCGTCCCCTTCTTTCGGAAGCCTCCGGTAACAGGAAAGCATCTGGCGCGCGGGCACCGCGCTAA

Upstream 100 bases:

>100_bases
CCCTCTCTCCGCCAGAATACGCAAACCCCTGAGAAATCAGGGGGTTTTTTGTTAGCGTAAAAACTGGCTGCAGCTGCGCA
AGTCGGAACACACGACGCCC

Downstream 100 bases:

>100_bases
ATGAAACGAATGCAGCGTATTGCTTTACGCCAAAGACTACGGCGCCTGACGGATGGCCGCAGCAGAAATATACGCTGATT
ATTTTAGTCGCAGCCAGTGA

Product: putative integrase

Products: NA

Alternate protein names: Integrase; Phage-Related Integrase; Phage Integrase; Phage Integrase Family Protein; Phage Integrase Family Site Specific Recombinase; Site-Specific Recombinase Phage Integrase Family; Site-Specific Recombinase; Integrase/Resolvase Recombinase Protein; Phage Integrase Domain/SAM Domain-Containing Protein; Phage Integrase-Like Protein

Number of amino acids: Translated: 505; Mature: 505

Protein sequence:

>505_residues
MRIPHHLVRAPFGLWSYRQRVPVDLQPIVGRQTFKRTLHTYDMREARLRALTLAARYAQVFTVLKERRMQSQDDDLDALL
ARLTGTQRPQELTLNRTRSADGSITEQWQIDTPEDVTLFQQLMALTAPQPSALGELIQQHVPPLPTPRRVTKPSLESITL
GKARDAWLNSLKGSTLPKTWTIKRTAVELLTSFLGEKTKLHTVTRSDLARWYQDMREKGASTPTLTNKQSYIGGKGGFFE
WAQASGHYPRGDNPASGHVSYSTREKRARRKFGFKAYDAHQVQALFAPAAFEALPLAARWASLIGLYTGARASEVGQLLT
ADVVEEGGIPCFQISDEGEHQKVKTDKSLRTVPIHPDLLALGFLTWVEQARAEGQERLFPAAKADAKNGQGNWISKAFSR
HLAEVGKNWPTAKRGFHSLRKTLIQELQGAGVVSELRAQLVGHELDDEHHVTYSRAFTAKEKLDGLRGVSPGLSVLAYGL
SLDAIRPLLSEASGNRKASGARAPR

Sequences:

>Translated_505_residues
MRIPHHLVRAPFGLWSYRQRVPVDLQPIVGRQTFKRTLHTYDMREARLRALTLAARYAQVFTVLKERRMQSQDDDLDALL
ARLTGTQRPQELTLNRTRSADGSITEQWQIDTPEDVTLFQQLMALTAPQPSALGELIQQHVPPLPTPRRVTKPSLESITL
GKARDAWLNSLKGSTLPKTWTIKRTAVELLTSFLGEKTKLHTVTRSDLARWYQDMREKGASTPTLTNKQSYIGGKGGFFE
WAQASGHYPRGDNPASGHVSYSTREKRARRKFGFKAYDAHQVQALFAPAAFEALPLAARWASLIGLYTGARASEVGQLLT
ADVVEEGGIPCFQISDEGEHQKVKTDKSLRTVPIHPDLLALGFLTWVEQARAEGQERLFPAAKADAKNGQGNWISKAFSR
HLAEVGKNWPTAKRGFHSLRKTLIQELQGAGVVSELRAQLVGHELDDEHHVTYSRAFTAKEKLDGLRGVSPGLSVLAYGL
SLDAIRPLLSEASGNRKASGARAPR
>Mature_505_residues
MRIPHHLVRAPFGLWSYRQRVPVDLQPIVGRQTFKRTLHTYDMREARLRALTLAARYAQVFTVLKERRMQSQDDDLDALL
ARLTGTQRPQELTLNRTRSADGSITEQWQIDTPEDVTLFQQLMALTAPQPSALGELIQQHVPPLPTPRRVTKPSLESITL
GKARDAWLNSLKGSTLPKTWTIKRTAVELLTSFLGEKTKLHTVTRSDLARWYQDMREKGASTPTLTNKQSYIGGKGGFFE
WAQASGHYPRGDNPASGHVSYSTREKRARRKFGFKAYDAHQVQALFAPAAFEALPLAARWASLIGLYTGARASEVGQLLT
ADVVEEGGIPCFQISDEGEHQKVKTDKSLRTVPIHPDLLALGFLTWVEQARAEGQERLFPAAKADAKNGQGNWISKAFSR
HLAEVGKNWPTAKRGFHSLRKTLIQELQGAGVVSELRAQLVGHELDDEHHVTYSRAFTAKEKLDGLRGVSPGLSVLAYGL
SLDAIRPLLSEASGNRKASGARAPR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 56169; Mature: 56169

Theoretical pI: Translated: 10.49; Mature: 10.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRIPHHLVRAPFGLWSYRQRVPVDLQPIVGRQTFKRTLHTYDMREARLRALTLAARYAQV
CCCCHHHHHCCCHHHHHHHCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FTVLKERRMQSQDDDLDALLARLTGTQRPQELTLNRTRSADGSITEQWQIDTPEDVTLFQ
HHHHHHHHHCCCCCCHHHHHHHHHCCCCCHHHHHHCCCCCCCCCCCCEECCCCHHHHHHH
QLMALTAPQPSALGELIQQHVPPLPTPRRVTKPSLESITLGKARDAWLNSLKGSTLPKTW
HHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHEECCCHHHHHHHHHCCCCCCCEE
TIKRTAVELLTSFLGEKTKLHTVTRSDLARWYQDMREKGASTPTLTNKQSYIGGKGGFFE
EHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCH
WAQASGHYPRGDNPASGHVSYSTREKRARRKFGFKAYDAHQVQALFAPAAFEALPLAARW
HHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
ASLIGLYTGARASEVGQLLTADVVEEGGIPCFQISDEGEHQKVKTDKSLRTVPIHPDLLA
HHHHHHHCCCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCHHHCCCCCCEEECCCHHHHH
LGFLTWVEQARAEGQERLFPAAKADAKNGQGNWISKAFSRHLAEVGKNWPTAKRGFHSLR
HHHHHHHHHHHHCCHHHHCCCHHCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
KTLIQELQGAGVVSELRAQLVGHELDDEHHVTYSRAFTAKEKLDGLRGVSPGLSVLAYGL
HHHHHHHHCCCHHHHHHHHHHCCCCCCCCCEEHHHHHHHHHHHHHHCCCCCHHHHHHHHC
SLDAIRPLLSEASGNRKASGARAPR
CHHHHHHHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure
MRIPHHLVRAPFGLWSYRQRVPVDLQPIVGRQTFKRTLHTYDMREARLRALTLAARYAQV
CCCCHHHHHCCCHHHHHHHCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FTVLKERRMQSQDDDLDALLARLTGTQRPQELTLNRTRSADGSITEQWQIDTPEDVTLFQ
HHHHHHHHHCCCCCCHHHHHHHHHCCCCCHHHHHHCCCCCCCCCCCCEECCCCHHHHHHH
QLMALTAPQPSALGELIQQHVPPLPTPRRVTKPSLESITLGKARDAWLNSLKGSTLPKTW
HHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHEECCCHHHHHHHHHCCCCCCCEE
TIKRTAVELLTSFLGEKTKLHTVTRSDLARWYQDMREKGASTPTLTNKQSYIGGKGGFFE
EHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCH
WAQASGHYPRGDNPASGHVSYSTREKRARRKFGFKAYDAHQVQALFAPAAFEALPLAARW
HHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
ASLIGLYTGARASEVGQLLTADVVEEGGIPCFQISDEGEHQKVKTDKSLRTVPIHPDLLA
HHHHHHHCCCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCHHHCCCCCCEEECCCHHHHH
LGFLTWVEQARAEGQERLFPAAKADAKNGQGNWISKAFSRHLAEVGKNWPTAKRGFHSLR
HHHHHHHHHHHHCCHHHHCCCHHCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
KTLIQELQGAGVVSELRAQLVGHELDDEHHVTYSRAFTAKEKLDGLRGVSPGLSVLAYGL
HHHHHHHHCCCHHHHHHHHHHCCCCCCCCCEEHHHHHHHHHHHHHHCCCCCHHHHHHHHC
SLDAIRPLLSEASGNRKASGARAPR
CHHHHHHHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA