Click here to switch to the map view.

The map label for this gene is 78046593

Identifier: 78046593

GI number: 78046593

Start: 1164254

End: 1164499

Strand: Reverse

Name: 78046593

Synonym: XCV1037

Alternate gene names: NA

Gene position: 1164499-1164254 (Counterclockwise)

Preceding gene: 78046594

Following gene: 78046592

Centisome position: 22.49

GC content: 54.47

Gene sequence:

>246_bases
ATGGCGTCTGTGCTGCTTCCGATGGCGTTATCAGCAAGATGCGTCGAGACCGCGCATCTGTACGCATCCAAGATGATGTC
TAAATCGCCAAGACTGCAGCACGACGATGTATCTCGGACACGTAGCACTTCCGCCATCGCTGGCGTCACCGCAACGCTCG
TTTTTCTCGCGCATCCGTGGTCGATGTACGAAACCAATTGCGTAACTCAACTGGACAACACAACAACGCGTGACGAGCGC
GTGTAA

Upstream 100 bases:

>100_bases
CGAATGATCGACGAGCTGTCGAAACATGGTCACGCATCCTCCGAACGTCATGCAGTGACGGAAATCGCGTCGTAATGGCA
GATAGCTTTCGCTGCAGCGG

Downstream 100 bases:

>100_bases
GAAAAATTCGCTTATGCGGAGGGTGCTTTTTTGGCCGCCAGGCGATCTTCCCAAACCAACGCGCAATGCCGCAGCGTGCG
CGATGTGGCAAAAAATTCAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 81; Mature: 80

Protein sequence:

>81_residues
MASVLLPMALSARCVETAHLYASKMMSKSPRLQHDDVSRTRSTSAIAGVTATLVFLAHPWSMYETNCVTQLDNTTTRDER
V

Sequences:

>Translated_81_residues
MASVLLPMALSARCVETAHLYASKMMSKSPRLQHDDVSRTRSTSAIAGVTATLVFLAHPWSMYETNCVTQLDNTTTRDER
V
>Mature_80_residues
ASVLLPMALSARCVETAHLYASKMMSKSPRLQHDDVSRTRSTSAIAGVTATLVFLAHPWSMYETNCVTQLDNTTTRDERV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8972; Mature: 8841

Theoretical pI: Translated: 8.25; Mature: 8.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
6.2 %Met     (Translated Protein)
8.6 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
5.0 %Met     (Mature Protein)
7.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASVLLPMALSARCVETAHLYASKMMSKSPRLQHDDVSRTRSTSAIAGVTATLVFLAHPW
CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCHHHHHHHHHHHHHHHCCC
SMYETNCVTQLDNTTTRDERV
HHHHCCHHHCCCCCCCCCCCC
>Mature Secondary Structure 
ASVLLPMALSARCVETAHLYASKMMSKSPRLQHDDVSRTRSTSAIAGVTATLVFLAHPW
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCHHHHHHHHHHHHHHHCCC
SMYETNCVTQLDNTTTRDERV
HHHHCCHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA