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The map label for this gene is yhjB [C]

Identifier: 78046491

GI number: 78046491

Start: 1063363

End: 1064070

Strand: Reverse

Name: yhjB [C]

Synonym: XCV0935

Alternate gene names: 78046491

Gene position: 1064070-1063363 (Counterclockwise)

Preceding gene: 78046494

Following gene: 78046490

Centisome position: 20.55

GC content: 69.07

Gene sequence:

>708_bases
ATGGAAACTCCCACCAATGCTGGCGATTGGCGCCTAGCCTTGCGCCGCGAGGCCTCCGATAGCGCGCGTTGGCAGGCGCT
GTGGGAAGCTGCCGTTGCACTGCGCCAGGTGCACAGCCCCGAGCAGGCCTGCGATGCGGTCCTTGGCCGGGTGCTGCTGC
TGCTGGGCCTGGAACACGGCGCAGTACTGGCGCAGCGCGGCCCGCGCGCGCAAGTGTTGGCCAGCCGCGGCCGTGCATTG
CCGCCCGGTGCCAGCGCCGCCGGCGACGGCCAGGAAGCGGCCTGGTTGATGCCACCGCGCCCGTCCGACATCCGCGAAGC
CAGGGTGCCGATCCACGCGCTGGGCACCACGCACGGCATGCTCTGCGTGGCCTGGAGCGAAGGCCGCCCGGCCCCCGGCA
ATGACGACGTGCAGGCGCTGCAGGCGTTCGCGCTGCTGCTGCCGGCGATGGTGGCGGAGCCGGCCAAACCGATTGCCACG
CGGCGGCGCAAACCGCTGCAGGACGACCGTCTGGGCGCGCTGAGCAAGCGCGAAAAACAGGTGTTGTCGTTGCTTCCGCG
CGGACTCACCAACGCGACCCTCGCAGCTGAACTGGGGATTTCTCCCGGCACGGTGAAAGTGCACGTGGAGCGAATCCTGC
AGAAACTTGAGGTAAAAGATCGCACCCAGGCCGCGGTGTACGCGGTCCAATCCGGACTTGCGCTATGA

Upstream 100 bases:

>100_bases
GGGTGCCTCAGCGGGCAGGCTCAGTATCGAAATCAAGCAGCCCCAACAATTCTGCCGGGTGGCATATACTCAAATATGCT
GATCGGCCTAGAGCGAGCCT

Downstream 100 bases:

>100_bases
ATGCATTGGCGGTGCGTTGGAACGATTGGCCGATTACCCGCAAAAGCCTGGCGGTGGTCACCCTGCCGCTGCTGTTGCTG
GCCGTTGCGTTGATGGCGAT

Product: LuxR family transcriptional regulator

Products: NA

Alternate protein names: Two Component Transcriptional Regulator LuxR Family; Two Component LuxR Family Transcriptional Regulator; Two-Component System Regulator; Two Component System Response Regulator; Two-Component System Regulatory Protein; LuxR Family Two Component Transcriptional Regulator; LuxR Family Transcriptional Regulator; Transcriptional Regulator LuxR Family; Two Component Transcriptional Regulator Luxr Family; Two-Component Response Regulator Protein; NarL Subfamily Protein; Two Component Response Regulator

Number of amino acids: Translated: 235; Mature: 235

Protein sequence:

>235_residues
METPTNAGDWRLALRREASDSARWQALWEAAVALRQVHSPEQACDAVLGRVLLLLGLEHGAVLAQRGPRAQVLASRGRAL
PPGASAAGDGQEAAWLMPPRPSDIREARVPIHALGTTHGMLCVAWSEGRPAPGNDDVQALQAFALLLPAMVAEPAKPIAT
RRRKPLQDDRLGALSKREKQVLSLLPRGLTNATLAAELGISPGTVKVHVERILQKLEVKDRTQAAVYAVQSGLAL

Sequences:

>Translated_235_residues
METPTNAGDWRLALRREASDSARWQALWEAAVALRQVHSPEQACDAVLGRVLLLLGLEHGAVLAQRGPRAQVLASRGRAL
PPGASAAGDGQEAAWLMPPRPSDIREARVPIHALGTTHGMLCVAWSEGRPAPGNDDVQALQAFALLLPAMVAEPAKPIAT
RRRKPLQDDRLGALSKREKQVLSLLPRGLTNATLAAELGISPGTVKVHVERILQKLEVKDRTQAAVYAVQSGLAL
>Mature_235_residues
METPTNAGDWRLALRREASDSARWQALWEAAVALRQVHSPEQACDAVLGRVLLLLGLEHGAVLAQRGPRAQVLASRGRAL
PPGASAAGDGQEAAWLMPPRPSDIREARVPIHALGTTHGMLCVAWSEGRPAPGNDDVQALQAFALLLPAMVAEPAKPIAT
RRRKPLQDDRLGALSKREKQVLSLLPRGLTNATLAAELGISPGTVKVHVERILQKLEVKDRTQAAVYAVQSGLAL

Specific function: Unknown

COG id: COG2197

COG function: function code TK; Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25150; Mature: 25150

Theoretical pI: Translated: 10.45; Mature: 10.45

Prosite motif: PS50043 HTH_LUXR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
METPTNAGDWRLALRREASDSARWQALWEAAVALRQVHSPEQACDAVLGRVLLLLGLEHG
CCCCCCCCCEEEEEHHCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCC
AVLAQRGPRAQVLASRGRALPPGASAAGDGQEAAWLMPPRPSDIREARVPIHALGTTHGM
HHHHCCCCHHHHHHHCCCCCCCCCCCCCCCCCCEEECCCCCCCHHHHCCCHHCCCCCCCE
LCVAWSEGRPAPGNDDVQALQAFALLLPAMVAEPAKPIATRRRKPLQDDRLGALSKREKQ
EEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCHHHHHHHHHHHHH
VLSLLPRGLTNATLAAELGISPGTVKVHVERILQKLEVKDRTQAAVYAVQSGLAL
HHHHHCCCCCCHHHHHHCCCCCCEEHHHHHHHHHHHCCCHHHHHHHHHHHHCCCC
>Mature Secondary Structure
METPTNAGDWRLALRREASDSARWQALWEAAVALRQVHSPEQACDAVLGRVLLLLGLEHG
CCCCCCCCCEEEEEHHCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCC
AVLAQRGPRAQVLASRGRALPPGASAAGDGQEAAWLMPPRPSDIREARVPIHALGTTHGM
HHHHCCCCHHHHHHHCCCCCCCCCCCCCCCCCCEEECCCCCCCHHHHCCCHHCCCCCCCE
LCVAWSEGRPAPGNDDVQALQAFALLLPAMVAEPAKPIATRRRKPLQDDRLGALSKREKQ
EEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCHHHHHHHHHHHHH
VLSLLPRGLTNATLAAELGISPGTVKVHVERILQKLEVKDRTQAAVYAVQSGLAL
HHHHHCCCCCCHHHHHHCCCCCCEEHHHHHHHHHHHCCCHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA