| Definition | Xanthomonas campestris pv. vesicatoria str. 85-10 chromosome, complete genome. |
|---|---|
| Accession | NC_007508 |
| Length | 5,178,466 |
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The map label for this gene is 78046482
Identifier: 78046482
GI number: 78046482
Start: 1055511
End: 1055927
Strand: Reverse
Name: 78046482
Synonym: XCV0926
Alternate gene names: NA
Gene position: 1055927-1055511 (Counterclockwise)
Preceding gene: 78046483
Following gene: 78046481
Centisome position: 20.39
GC content: 66.43
Gene sequence:
>417_bases ATGTCCCGTCTTTTGTCCCGGTGTCTGAGCACGCTGTTGCTGCTGGCCTGTCTTGGGTCGATTGGCTGCGTGGCCGCACC ACCGACCGATACCGCCACGCCACCTCCGGCGACCGGCTCGACACGCGGCCCGGCAGCCGGCAAAGCGGTGGTCGTCACCA CCACTTGCCGCACCGATGCCGATTGCACGGTGAAGAACGTCGGCAACTGTTGCGGTGCGTTTCCGGCCTGCGTCAACGTC AACAGCGCCACCGACCCCAACGGCGTACTGGCGCAATGCCAGGCTGGCGGCATGATGAGCGTGTGCGGCTTCCGCGAGAT CAGCGCCTGCCAGTGCGTGGCCGGTCAATGTGCCGCAAAGGACGCGCAGGCCGATACACTGCGCCCCGCCACTCCCCCTA CAGAAACGGTCCACTGA
Upstream 100 bases:
>100_bases GATCTGGATTGCGGAATTTTCTAGCTGATCCTGCGCGTGCCACATTCCGCGCACCCGGGGCTTACCATGGCCGCTCACCT ATCCTGATCGGAGCGGCCGC
Downstream 100 bases:
>100_bases TGCTTTACGCGCACATCCACCTCACCCTGCCCGACTGGATCCACGCGCATGTCGACGACAGCCGCGCCTATCCCAGCGAT GAGGACAAGGTGGCCCTGGC
Product: putative secreted protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 138; Mature: 137
Protein sequence:
>138_residues MSRLLSRCLSTLLLLACLGSIGCVAAPPTDTATPPPATGSTRGPAAGKAVVVTTTCRTDADCTVKNVGNCCGAFPACVNV NSATDPNGVLAQCQAGGMMSVCGFREISACQCVAGQCAAKDAQADTLRPATPPTETVH
Sequences:
>Translated_138_residues MSRLLSRCLSTLLLLACLGSIGCVAAPPTDTATPPPATGSTRGPAAGKAVVVTTTCRTDADCTVKNVGNCCGAFPACVNV NSATDPNGVLAQCQAGGMMSVCGFREISACQCVAGQCAAKDAQADTLRPATPPTETVH >Mature_137_residues SRLLSRCLSTLLLLACLGSIGCVAAPPTDTATPPPATGSTRGPAAGKAVVVTTTCRTDADCTVKNVGNCCGAFPACVNVN SATDPNGVLAQCQAGGMMSVCGFREISACQCVAGQCAAKDAQADTLRPATPPTETVH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13773; Mature: 13642
Theoretical pI: Translated: 7.44; Mature: 7.44
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
9.4 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 11.6 %Cys+Met (Translated Protein) 9.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 10.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRLLSRCLSTLLLLACLGSIGCVAAPPTDTATPPPATGSTRGPAAGKAVVVTTTCRTDA CHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCC DCTVKNVGNCCGAFPACVNVNSATDPNGVLAQCQAGGMMSVCGFREISACQCVAGQCAAK CCCHHHHHHHHCCCHHHEECCCCCCCCCEEEECCCCCEECCCCCCHHHHHHHHHHHHHCC DAQADTLRPATPPTETVH CCCCCCCCCCCCCCCCCC >Mature Secondary Structure SRLLSRCLSTLLLLACLGSIGCVAAPPTDTATPPPATGSTRGPAAGKAVVVTTTCRTDA HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCC DCTVKNVGNCCGAFPACVNVNSATDPNGVLAQCQAGGMMSVCGFREISACQCVAGQCAAK CCCHHHHHHHHCCCHHHEECCCCCCCCCEEEECCCCCEECCCCCCHHHHHHHHHHHHHCC DAQADTLRPATPPTETVH CCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA