| Definition | Xanthomonas campestris pv. vesicatoria str. 85-10 chromosome, complete genome. |
|---|---|
| Accession | NC_007508 |
| Length | 5,178,466 |
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The map label for this gene is surA [H]
Identifier: 78046458
GI number: 78046458
Start: 1030187
End: 1031578
Strand: Reverse
Name: surA [H]
Synonym: XCV0902
Alternate gene names: 78046458
Gene position: 1031578-1030187 (Counterclockwise)
Preceding gene: 78046459
Following gene: 78046457
Centisome position: 19.92
GC content: 65.59
Gene sequence:
>1392_bases ATGACCAAGCCTTTCTCTGTTGTTCTTGCCTCGCTGCTGGCCATCACCAGCACGGTTTCGCCGTTGGCCTCGGCACAGCA ATCCCAGCCGCTGGATCGCATCGCTGCCATCGTCGACGAAGACGTGGTGCTGCAGAGCGAGCTCGATCGCGCCGTACGCA ACGTCAAGTCGCAGTACGCCGGTCGCGAAAACCAGCTGCCGCCAGACGATGTGCTGCAGCGCCAGGTGCTTGAGCGCCTG GTGCTGGTCAAGCTGCAGGTCAGCCGTGCCGATGGCAACGGTATCCGCGTCAGCGACGAAGAACTCAACCGCGCCATCGC CAGCATCGCCCAGCAGAACGGCACGACCGTGGACGGCCTGCGCCAGAAGCTGGCAGCCGACGGGATGGGCTACGCCGATT TCCGCGCATCGGTGCGCGACGAGATCATCGTGCAGCGCCTGCGCCAGAGCTTTGCGCAGAGCCGCATCAGCGTGAGCGAA GGCGAAGTGGATACCGCACTGGCCCAACAGGCCGCCACCGGTAGCCAGTACCACCTGGCGCACATCCTGATCGGCTTGCC GGAAGGGGCAACTGCCGAGCAGATCGCCACCGGCCAGAAGAAGGTCGATGGCGTCAAAGCCTTGATCGACAAGGGCGAGC TGGATTTTTCGGCCGCTGCGGTGCGTTATTCCGACAGCCCCAATGCGCTGGAAGGCGGCGATCTGGGCTGGCGCAGCCTG GATGAAATCCCGAACGCATTTGCGCAGCTGATCCGCGACATGCAGCCCGGCCAGGTGGCCGGACCGCTGCGCGGCCCGAG TGGCTTCCAGTTGCTCAAGCTGGTGGAAATGCGCGACGCCAATGCCGGCGGCGAAAAGAAGATGGTCACCGAGTACCACG CACGCCACATCCTGGTGCGGATCGGCGAGAACCAGACCGAGGCGCAGGCCAAGGCCAAGATCGATACGATTCGCGCGCGC ATCGTTGGTGGTGCCGATTTCCAGGCGACGGCCAAGGAGTCCTCCGAGGACACCAACAGCCGCGGTCAGGGTGGCGATCT GGGCTGGTTCCCCGCCGATGCGTTCGGCCCGGACTTCGGCAAGCAGGTCGAAAGCCTGACCGACGGCGCAGTCTCCGAAC CGTTCCGGACCCAGGCGGGCTGGCACATCGTGCAGCGCGTCGGCAGCCGCCAGACCGACGTCAGCGCCGAGAACCAGCGC GCGCAGGTGCGTGAAACCATCGGTCGCCGCAAGCTGGAAGAAGAGTACAACCGCTATCTGCAGGAACTGCGTGGCGAAGC GTATGTGAGCTACCGCACCGGCGACCGCGCCGATGACAATGCCACTGCCGCTCCGGCCAAATCGGCAGACCCGGCAGCGC CCTCGCCGCCGCCGGCAAAGCCGACGCGCTGA
Upstream 100 bases:
>100_bases TGCGCCGTGCTATTCTCGGCTATTACCGCGACGACCTCTACCTGGTCCCGCCCAGTAACACCACGACCAATCCGGACGAT TACGATCCGAACCTGATTCC
Downstream 100 bases:
>100_bases GACCGGGCAGCCGGATAGCATGATGGTCCCGTCGCTCGCGCTGGTGCCAGGCGAGCCGGCCGGAATCGGGCCGGAGCTAT GCATCCGGCTTGCGCAGCAG
Product: peptidylprolyl isomerase precursor
Products: NA
Alternate protein names: Peptidyl-prolyl cis-trans isomerase surA; PPIase surA; Rotamase surA [H]
Number of amino acids: Translated: 463; Mature: 462
Protein sequence:
>463_residues MTKPFSVVLASLLAITSTVSPLASAQQSQPLDRIAAIVDEDVVLQSELDRAVRNVKSQYAGRENQLPPDDVLQRQVLERL VLVKLQVSRADGNGIRVSDEELNRAIASIAQQNGTTVDGLRQKLAADGMGYADFRASVRDEIIVQRLRQSFAQSRISVSE GEVDTALAQQAATGSQYHLAHILIGLPEGATAEQIATGQKKVDGVKALIDKGELDFSAAAVRYSDSPNALEGGDLGWRSL DEIPNAFAQLIRDMQPGQVAGPLRGPSGFQLLKLVEMRDANAGGEKKMVTEYHARHILVRIGENQTEAQAKAKIDTIRAR IVGGADFQATAKESSEDTNSRGQGGDLGWFPADAFGPDFGKQVESLTDGAVSEPFRTQAGWHIVQRVGSRQTDVSAENQR AQVRETIGRRKLEEEYNRYLQELRGEAYVSYRTGDRADDNATAAPAKSADPAAPSPPPAKPTR
Sequences:
>Translated_463_residues MTKPFSVVLASLLAITSTVSPLASAQQSQPLDRIAAIVDEDVVLQSELDRAVRNVKSQYAGRENQLPPDDVLQRQVLERL VLVKLQVSRADGNGIRVSDEELNRAIASIAQQNGTTVDGLRQKLAADGMGYADFRASVRDEIIVQRLRQSFAQSRISVSE GEVDTALAQQAATGSQYHLAHILIGLPEGATAEQIATGQKKVDGVKALIDKGELDFSAAAVRYSDSPNALEGGDLGWRSL DEIPNAFAQLIRDMQPGQVAGPLRGPSGFQLLKLVEMRDANAGGEKKMVTEYHARHILVRIGENQTEAQAKAKIDTIRAR IVGGADFQATAKESSEDTNSRGQGGDLGWFPADAFGPDFGKQVESLTDGAVSEPFRTQAGWHIVQRVGSRQTDVSAENQR AQVRETIGRRKLEEEYNRYLQELRGEAYVSYRTGDRADDNATAAPAKSADPAAPSPPPAKPTR >Mature_462_residues TKPFSVVLASLLAITSTVSPLASAQQSQPLDRIAAIVDEDVVLQSELDRAVRNVKSQYAGRENQLPPDDVLQRQVLERLV LVKLQVSRADGNGIRVSDEELNRAIASIAQQNGTTVDGLRQKLAADGMGYADFRASVRDEIIVQRLRQSFAQSRISVSEG EVDTALAQQAATGSQYHLAHILIGLPEGATAEQIATGQKKVDGVKALIDKGELDFSAAAVRYSDSPNALEGGDLGWRSLD EIPNAFAQLIRDMQPGQVAGPLRGPSGFQLLKLVEMRDANAGGEKKMVTEYHARHILVRIGENQTEAQAKAKIDTIRARI VGGADFQATAKESSEDTNSRGQGGDLGWFPADAFGPDFGKQVESLTDGAVSEPFRTQAGWHIVQRVGSRQTDVSAENQRA QVRETIGRRKLEEEYNRYLQELRGEAYVSYRTGDRADDNATAAPAKSADPAAPSPPPAKPTR
Specific function: Chaperone involved in the correct folding and assembly of outer membrane proteins. It recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act
COG id: COG0760
COG function: function code O; Parvulin-like peptidyl-prolyl isomerase
Gene ontology:
Cell location: Periplasm. Note=Is capable of associating with the outer membrane (By similarity) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 PpiC domains [H]
Homologues:
Organism=Escherichia coli, GI1786238, Length=428, Percent_Identity=35.981308411215, Blast_Score=256, Evalue=3e-69,
Paralogues:
None
Copy number: 400 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 160 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000297 - InterPro: IPR023034 - InterPro: IPR015391 - InterPro: IPR008880 [H]
Pfam domain/function: PF00639 Rotamase; PF09312 SurA_N [H]
EC number: =5.2.1.8 [H]
Molecular weight: Translated: 50089; Mature: 49958
Theoretical pI: Translated: 5.27; Mature: 5.27
Prosite motif: PS50198 PPIC_PPIASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKPFSVVLASLLAITSTVSPLASAQQSQPLDRIAAIVDEDVVLQSELDRAVRNVKSQYA CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC GRENQLPPDDVLQRQVLERLVLVKLQVSRADGNGIRVSDEELNRAIASIAQQNGTTVDGL CCCCCCCHHHHHHHHHHHHHHHHHHEEEECCCCCCEECHHHHHHHHHHHHHHCCCCHHHH RQKLAADGMGYADFRASVRDEIIVQRLRQSFAQSRISVSEGEVDTALAQQAATGSQYHLA HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCEEEE HILIGLPEGATAEQIATGQKKVDGVKALIDKGELDFSAAAVRYSDSPNALEGGDLGWRSL HHEEECCCCCCHHHHHCCHHHHHHHHHHHHCCCCCHHHHEEEECCCCCCCCCCCCCHHHH DEIPNAFAQLIRDMQPGQVAGPLRGPSGFQLLKLVEMRDANAGGEKKMVTEYHARHILVR HHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHEEEEE IGENQTEAQAKAKIDTIRARIVGGADFQATAKESSEDTNSRGQGGDLGWFPADAFGPDFG ECCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHH KQVESLTDGAVSEPFRTQAGWHIVQRVGSRQTDVSAENQRAQVRETIGRRKLEEEYNRYL HHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH QELRGEAYVSYRTGDRADDNATAAPAKSADPAAPSPPPAKPTR HHHCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure TKPFSVVLASLLAITSTVSPLASAQQSQPLDRIAAIVDEDVVLQSELDRAVRNVKSQYA CCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC GRENQLPPDDVLQRQVLERLVLVKLQVSRADGNGIRVSDEELNRAIASIAQQNGTTVDGL CCCCCCCHHHHHHHHHHHHHHHHHHEEEECCCCCCEECHHHHHHHHHHHHHHCCCCHHHH RQKLAADGMGYADFRASVRDEIIVQRLRQSFAQSRISVSEGEVDTALAQQAATGSQYHLA HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCEEEE HILIGLPEGATAEQIATGQKKVDGVKALIDKGELDFSAAAVRYSDSPNALEGGDLGWRSL HHEEECCCCCCHHHHHCCHHHHHHHHHHHHCCCCCHHHHEEEECCCCCCCCCCCCCHHHH DEIPNAFAQLIRDMQPGQVAGPLRGPSGFQLLKLVEMRDANAGGEKKMVTEYHARHILVR HHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHEEEEE IGENQTEAQAKAKIDTIRARIVGGADFQATAKESSEDTNSRGQGGDLGWFPADAFGPDFG ECCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHH KQVESLTDGAVSEPFRTQAGWHIVQRVGSRQTDVSAENQRAQVRETIGRRKLEEEYNRYL HHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH QELRGEAYVSYRTGDRADDNATAAPAKSADPAAPSPPPAKPTR HHHCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 12024217 [H]