| Definition | Xanthomonas campestris pv. vesicatoria str. 85-10 chromosome, complete genome. |
|---|---|
| Accession | NC_007508 |
| Length | 5,178,466 |
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The map label for this gene is apaH [H]
Identifier: 78046454
GI number: 78046454
Start: 1026885
End: 1027841
Strand: Reverse
Name: apaH [H]
Synonym: XCV0898
Alternate gene names: 78046454
Gene position: 1027841-1026885 (Counterclockwise)
Preceding gene: 78046455
Following gene: 78046445
Centisome position: 19.85
GC content: 67.4
Gene sequence:
>957_bases ATGAGCGTCTGGGCCATCGGCGACCTGCAAGGGTGCTACGACATCACCCAGCGGTTGCTGGAGAAGATCAATTTCGACCC CGCCCAGGACACGCTGTGGTTCTGCGGCGATCTGGTCAACCGCGGCGGGCAATCGCTGGAAACGCTGCGCCTGGTGCATT CCCTGCGCGCGCACAGCGTAGTGGTGCTGGGCAATCACGACCTGTCGCTGCTGGCGATCGGGGCGCGTTCGGAAGAAGAG CAGCGCAAGGTCAACCCGGATCTGCTGCGCATCGTGATGGCCGAAGATCGCGATGCGTTGCTGGACTGGCTACGCATGCA GAAGCTGGCGCACGTGGACCGCACCCTGGGCTGGATGATGATCCATGCCGGGCTGGCGCCGAAGTGGACCACGCAGATGG CCGAAAAGCATGCACGCGAGGTCGAGCAGCAACTGCAGGGCGGCGGCTATCGCAAGCTGCTGCGCAATATGTACGGCGAC CAGCCGGGCTGGTCGCCGGGCCTGAGCGGCTACGACCGCAGCCGGGCCATCATCAACCTGTTCACCCGCATGCGCTACTG CACCCCGCGTGGGCGCATCGCCACCGACGACAAGGGCACGCCGGGGACGCAGGCACAGGGCCTGTATCCCTGGTTCGAAG TGCCGGGACGGGTCGAGCGCGACCTGAAGATCGTCTGCGGGCATTGGTCCGCACTGGGCCTGACGATCACCCAGGGTGTG CATGCGATCGATACCGGCGCGGTCTGGGGCGGCAAGCTCACGGCGTTGCAGCTGGATAGCGAGGAGCTGCGCGTGGTGCA GGTGCCCGGACGGGAAGTGACCGGGCCGGCACCGGTCGCACGCGCACCGCGGCGTCCACGTGAGCGTCAGGGGCGTCAGC GCTCGCGCGGCAACCGCGGCAATGCGGGGAACGCAGCGGCCGGCCCCAAGCCGTCAGTCGATACGCCACAGGACTGA
Upstream 100 bases:
>100_bases GCCGACGATGGCACCGAATTTATCGCTCCGATCGCCGCCTTCGTGCTGAGCGTGCCCAGGACGCTGCACTGATGAATGCC GGAGTAAGGGAGCGCGCGCA
Downstream 100 bases:
>100_bases GCGCGCGAGGCGCCCGTCGCCATCGCGGTGCCGGGCGCGACCCTGCATCGCTCAGCGGCGTTCGTAATCCACGAACGAAA ACGCATGGGCATGCCGGGCG
Product: diadenosine tetraphosphatase
Products: NA
Alternate protein names: Ap4A hydrolase; Diadenosine 5',5'''-P1,P4-tetraphosphate pyrophosphohydrolase; Diadenosine tetraphosphatase [H]
Number of amino acids: Translated: 318; Mature: 317
Protein sequence:
>318_residues MSVWAIGDLQGCYDITQRLLEKINFDPAQDTLWFCGDLVNRGGQSLETLRLVHSLRAHSVVVLGNHDLSLLAIGARSEEE QRKVNPDLLRIVMAEDRDALLDWLRMQKLAHVDRTLGWMMIHAGLAPKWTTQMAEKHAREVEQQLQGGGYRKLLRNMYGD QPGWSPGLSGYDRSRAIINLFTRMRYCTPRGRIATDDKGTPGTQAQGLYPWFEVPGRVERDLKIVCGHWSALGLTITQGV HAIDTGAVWGGKLTALQLDSEELRVVQVPGREVTGPAPVARAPRRPRERQGRQRSRGNRGNAGNAAAGPKPSVDTPQD
Sequences:
>Translated_318_residues MSVWAIGDLQGCYDITQRLLEKINFDPAQDTLWFCGDLVNRGGQSLETLRLVHSLRAHSVVVLGNHDLSLLAIGARSEEE QRKVNPDLLRIVMAEDRDALLDWLRMQKLAHVDRTLGWMMIHAGLAPKWTTQMAEKHAREVEQQLQGGGYRKLLRNMYGD QPGWSPGLSGYDRSRAIINLFTRMRYCTPRGRIATDDKGTPGTQAQGLYPWFEVPGRVERDLKIVCGHWSALGLTITQGV HAIDTGAVWGGKLTALQLDSEELRVVQVPGREVTGPAPVARAPRRPRERQGRQRSRGNRGNAGNAAAGPKPSVDTPQD >Mature_317_residues SVWAIGDLQGCYDITQRLLEKINFDPAQDTLWFCGDLVNRGGQSLETLRLVHSLRAHSVVVLGNHDLSLLAIGARSEEEQ RKVNPDLLRIVMAEDRDALLDWLRMQKLAHVDRTLGWMMIHAGLAPKWTTQMAEKHAREVEQQLQGGGYRKLLRNMYGDQ PGWSPGLSGYDRSRAIINLFTRMRYCTPRGRIATDDKGTPGTQAQGLYPWFEVPGRVERDLKIVCGHWSALGLTITQGVH AIDTGAVWGGKLTALQLDSEELRVVQVPGREVTGPAPVARAPRRPRERQGRQRSRGNRGNAGNAAAGPKPSVDTPQD
Specific function: Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP [H]
COG id: COG0639
COG function: function code T; Diadenosine tetraphosphatase and related serine/threonine protein phosphatases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the Ap4A hydrolase family [H]
Homologues:
Organism=Escherichia coli, GI1786234, Length=267, Percent_Identity=44.1947565543071, Blast_Score=218, Evalue=5e-58,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004617 - InterPro: IPR004843 - InterPro: IPR006186 [H]
Pfam domain/function: PF00149 Metallophos [H]
EC number: =3.6.1.41 [H]
Molecular weight: Translated: 35378; Mature: 35247
Theoretical pI: Translated: 9.67; Mature: 9.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVWAIGDLQGCYDITQRLLEKINFDPAQDTLWFCGDLVNRGGQSLETLRLVHSLRAHSV CCEEECCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCEE VVLGNHDLSLLAIGARSEEEQRKVNPDLLRIVMAEDRDALLDWLRMQKLAHVDRTLGWMM EEECCCCEEEEEECCCCCHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH IHAGLAPKWTTQMAEKHAREVEQQLQGGGYRKLLRNMYGDQPGWSPGLSGYDRSRAIINL HHCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHH FTRMRYCTPRGRIATDDKGTPGTQAQGLYPWFEVPGRVERDLKIVCGHWSALGLTITQGV HHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCEEEEECCCHHHHHHHHCCC HAIDTGAVWGGKLTALQLDSEELRVVQVPGREVTGPAPVARAPRRPRERQGRQRSRGNRG CEECCCCCCCCEEEEEEECCCCEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCC NAGNAAAGPKPSVDTPQD CCCCCCCCCCCCCCCCCC >Mature Secondary Structure SVWAIGDLQGCYDITQRLLEKINFDPAQDTLWFCGDLVNRGGQSLETLRLVHSLRAHSV CEEECCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCEE VVLGNHDLSLLAIGARSEEEQRKVNPDLLRIVMAEDRDALLDWLRMQKLAHVDRTLGWMM EEECCCCEEEEEECCCCCHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH IHAGLAPKWTTQMAEKHAREVEQQLQGGGYRKLLRNMYGDQPGWSPGLSGYDRSRAIINL HHCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHH FTRMRYCTPRGRIATDDKGTPGTQAQGLYPWFEVPGRVERDLKIVCGHWSALGLTITQGV HHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCEEEEECCCHHHHHHHHCCC HAIDTGAVWGGKLTALQLDSEELRVVQVPGREVTGPAPVARAPRRPRERQGRQRSRGNRG CEECCCCCCCCEEEEEEECCCCEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCC NAGNAAAGPKPSVDTPQD CCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12024217 [H]