| Definition | Xanthomonas campestris pv. vesicatoria str. 85-10 chromosome, complete genome. |
|---|---|
| Accession | NC_007508 |
| Length | 5,178,466 |
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The map label for this gene is 78046402
Identifier: 78046402
GI number: 78046402
Start: 966620
End: 967024
Strand: Reverse
Name: 78046402
Synonym: XCV0846
Alternate gene names: NA
Gene position: 967024-966620 (Counterclockwise)
Preceding gene: 78046405
Following gene: 78046399
Centisome position: 18.67
GC content: 63.95
Gene sequence:
>405_bases ATGTTGCAGCACGTTTCGCTGGGCGTTCGTACGATCGAGATATCCGCCGAATTTTTCGACGCAACGCTGGGTGCGCCTGG CTATGTGCGGGTGTGGTCCGATCTGGAGCCAGGCACGCTCGACCAGGCGGTCGGCGATGGCAGGCCCGGTGACGACGATT GCCTGGCGTTGAAACAACGCCAGGCAACGCAATGTGCCCCGGGGGTCGGATTCCATCTGGCATTTGCCGCTACCGACGCG TCCGCCGTGGACGCGTTTCACCGAGCCGCGCTACGGCACGGCGGTCACTGCAATGGCGCACCCGGCTTGCGACCGGATTA TGGCGATGACTATTACGCCGCGTTCGTCGATGACCCGGACGGCCACCACATCGAAGCGGTGGTCGACTGTACGCCGCCAC GGTAA
Upstream 100 bases:
>100_bases CCACTAGCGTCTTTTGCAGCATGCGATTGACGCCGGCGCGCGTGCAGACCAGCATCGCCGCCGGCACGCCGCTGTGCCGT CGCCATCGACGGCTGCACCG
Downstream 100 bases:
>100_bases CCAGCACCGCCGCTACGCAACGTTGGAATATCGGTTAAGGCGCAGCGACAGCGAGCTCGCCATGCGCAGTGAAGGTTATG GCGCTGCCTGCGTCAGGAAG
Product: hypothetical protein
Products: NA
Alternate protein names: Glyoxalase; Lactoylglutathione Lyase Protein; Glyoxylase; Lactoylglutathione Lyase; Glyoxylase Protein
Number of amino acids: Translated: 134; Mature: 134
Protein sequence:
>134_residues MLQHVSLGVRTIEISAEFFDATLGAPGYVRVWSDLEPGTLDQAVGDGRPGDDDCLALKQRQATQCAPGVGFHLAFAATDA SAVDAFHRAALRHGGHCNGAPGLRPDYGDDYYAAFVDDPDGHHIEAVVDCTPPR
Sequences:
>Translated_134_residues MLQHVSLGVRTIEISAEFFDATLGAPGYVRVWSDLEPGTLDQAVGDGRPGDDDCLALKQRQATQCAPGVGFHLAFAATDA SAVDAFHRAALRHGGHCNGAPGLRPDYGDDYYAAFVDDPDGHHIEAVVDCTPPR >Mature_134_residues MLQHVSLGVRTIEISAEFFDATLGAPGYVRVWSDLEPGTLDQAVGDGRPGDDDCLALKQRQATQCAPGVGFHLAFAATDA SAVDAFHRAALRHGGHCNGAPGLRPDYGDDYYAAFVDDPDGHHIEAVVDCTPPR
Specific function: Unknown
COG id: COG0346
COG function: function code E; Lactoylglutathione lyase and related lyases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14232; Mature: 14232
Theoretical pI: Translated: 4.55; Mature: 4.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.0 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 3.0 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLQHVSLGVRTIEISAEFFDATLGAPGYVRVWSDLEPGTLDQAVGDGRPGDDDCLALKQR CCCCCCCCEEEEEEEHEEHHHHCCCCCEEEEECCCCCCCCCHHHCCCCCCCHHHHHHHHH QATQCAPGVGFHLAFAATDASAVDAFHRAALRHGGHCNGAPGLRPDYGDDYYAAFVDDPD CHHCCCCCCCEEEEEEECCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEECCC GHHIEAVVDCTPPR CCEEEEEEECCCCC >Mature Secondary Structure MLQHVSLGVRTIEISAEFFDATLGAPGYVRVWSDLEPGTLDQAVGDGRPGDDDCLALKQR CCCCCCCCEEEEEEEHEEHHHHCCCCCEEEEECCCCCCCCCHHHCCCCCCCHHHHHHHHH QATQCAPGVGFHLAFAATDASAVDAFHRAALRHGGHCNGAPGLRPDYGDDYYAAFVDDPD CHHCCCCCCCEEEEEEECCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEECCC GHHIEAVVDCTPPR CCEEEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA