Click here to switch to the map view.

The map label for this gene is 78046393

Identifier: 78046393

GI number: 78046393

Start: 954581

End: 955027

Strand: Reverse

Name: 78046393

Synonym: XCV0837

Alternate gene names: NA

Gene position: 955027-954581 (Counterclockwise)

Preceding gene: 78046397

Following gene: 78046377

Centisome position: 18.44

GC content: 63.53

Gene sequence:

>447_bases
ATGAGTGTCATGTCCAAGCCCAAGTCCAACGCACGCAACCCTTCCACTCCACAACCGGCCATCGAGGCCGCGCTGGGGGA
AAAGGCTGGCGACCCCTTGCGCCGAGCCTTGTGGCTCGATGCGCTGGACCGGCAGTTGCGCCCCCTGTTACCACCTCATC
TGGCGACCCGTTGCCGGTTGGCCAATGTCCGAGGCGAACAGCTCGTTTTTCTGGTGGATTCGCCGGTCTGGCATGCCAAG
GTGCGGCTTGCCGAAACCCAAATCCTGGATGCCGCCCGATCCGTCGGACTGAAGGCCACCGCGGTGACCGTCAAGACCGC
AACCGTGCCGCTGCATTCCCCAACGCAGCAGAACCGCGACCGTCCCAAACCTGTATCCGAGGCGACGCACAAAGGCTTGC
GCGACGCGTTGGCTTCCCTGCAGGACGTGTTACCGACCAAACGGTGA

Upstream 100 bases:

>100_bases
GCACCACCATCGGTCGATCCGCTGCAAAGTCCTGGAACTGTCGGGCCACACGCTGCGCCCGGGTCTGCCGCGATTTGATT
ACAACTTTTTTCAACGCCAT

Downstream 100 bases:

>100_bases
AGCCATGCCGCCCATCCGGAGCGGCCGCCAGTGCGTGAAAGCGTTGCGAAGACCGCACACGACCCGACGCATCCTAGCGG
GCATGTGGCCCGCAGGAGTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 148; Mature: 147

Protein sequence:

>148_residues
MSVMSKPKSNARNPSTPQPAIEAALGEKAGDPLRRALWLDALDRQLRPLLPPHLATRCRLANVRGEQLVFLVDSPVWHAK
VRLAETQILDAARSVGLKATAVTVKTATVPLHSPTQQNRDRPKPVSEATHKGLRDALASLQDVLPTKR

Sequences:

>Translated_148_residues
MSVMSKPKSNARNPSTPQPAIEAALGEKAGDPLRRALWLDALDRQLRPLLPPHLATRCRLANVRGEQLVFLVDSPVWHAK
VRLAETQILDAARSVGLKATAVTVKTATVPLHSPTQQNRDRPKPVSEATHKGLRDALASLQDVLPTKR
>Mature_147_residues
SVMSKPKSNARNPSTPQPAIEAALGEKAGDPLRRALWLDALDRQLRPLLPPHLATRCRLANVRGEQLVFLVDSPVWHAKV
RLAETQILDAARSVGLKATAVTVKTATVPLHSPTQQNRDRPKPVSEATHKGLRDALASLQDVLPTKR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16181; Mature: 16050

Theoretical pI: Translated: 11.36; Mature: 11.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVMSKPKSNARNPSTPQPAIEAALGEKAGDPLRRALWLDALDRQLRPLLPPHLATRCRL
CCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
ANVRGEQLVFLVDSPVWHAKVRLAETQILDAARSVGLKATAVTVKTATVPLHSPTQQNRD
CCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEEEEEEECCCCCCHHCCC
RPKPVSEATHKGLRDALASLQDVLPTKR
CCCCHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
SVMSKPKSNARNPSTPQPAIEAALGEKAGDPLRRALWLDALDRQLRPLLPPHLATRCRL
CCCCCCCCCCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
ANVRGEQLVFLVDSPVWHAKVRLAETQILDAARSVGLKATAVTVKTATVPLHSPTQQNRD
CCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEEEEEEECCCCCCHHCCC
RPKPVSEATHKGLRDALASLQDVLPTKR
CCCCHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA