| Definition | Xanthomonas campestris pv. vesicatoria str. 85-10 chromosome, complete genome. |
|---|---|
| Accession | NC_007508 |
| Length | 5,178,466 |
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The map label for this gene is engXCA [H]
Identifier: 78046226
GI number: 78046226
Start: 758663
End: 760093
Strand: Reverse
Name: engXCA [H]
Synonym: XCV0670
Alternate gene names: 78046226
Gene position: 760093-758663 (Counterclockwise)
Preceding gene: 78046230
Following gene: 78046225
Centisome position: 14.68
GC content: 62.26
Gene sequence:
>1431_bases ATGCCCATTTTCAGGACTGCAAGTACGCTCGCATTGGCAACGATGTTAGCGCTCACAGCCGCACCGGCTTTCAGCTATTC GGTCAGCAACAACAAGATCGTCGACGACAACGGCAACGTGGTTCAGCTCAAGGGCGTCAACGTGTTCGGCTTCGAGACCG GCAACCATGTCATGCATGGCCTGTGGGCACGCAACTGGAAGGAGATGATCAACCAGATGCAGGGCCTGGGCTTCAACGCG GTGCGCCTGCCGTTTTGCCCGGCCACGCTGCGTAGCGGCCAGATGCCCAGCAGCATCGACTACAGCCGCAACGCCGATCT GCAGGGCCTGACCTCGCTGCAGATCCTCGACAAGGTGATCAACGAATTCAACGCACGCGGCATGTATGTGCTGCTGGATC ACCACACGCCCGATTGCGCGGCGATTTCCGAGCTGTGGTACACCAGTTCATATTCCGAAGCGCAATGGCTGGACGATCTG CGCTTTGTCGCCAACCGCTACAAGAACGTGCCGAGGGTGATCGGCGTGGATCTGAAGAACGAGCCGCACGGCGCCGCGAC CTGGGGCACGGGCAACGCCGCCACCGACTGGAACAAGGCCGCCGAGCGCGGTTCTGCCGCCGTGCTTGCGGTGGCGCCGA AGTGGATCATTGCGGTGGAAGGCATCACCGACAACCCGGTGTGTTCGACCAATGGCGGCATCTTCTGGGGTGGCAGCCTG CAGCCGCTGGCCTGCACCCCATTGAACATTCCGGCCAACCGACTGTTGCTGGCACCGCATGTGTACGGCCCGGACGTGTT CGTGCAGTCGTACTTCAACGACAGCAACTTCCCCAACAACATGCCTGCGATCTGGGACCGCCATTTCGGCCAGTTTGCCG GCAATCACGCACTGCTGCTGGGCGAATTCGGCGGCAAGTACGGCGAAGGCGATGCGCGCGACAAAGTCTGGCAGGACGCG CTGGTGAAGTACCTGCGTGGCAAGGGCATCAACGAAGGGTTCTATTGGTCGTGGAACCCCAATAGCGGCGATACCGGCGG CATCCTGCGCGACGACTGGATCAGCGTGCGCGAAGACAAGATGACCTTGTTGCGGACGCTGTGGGGAACGGTAAGCAACA GCACACCGACGCCAACGCCGACACCGACGCCGACACCGACGCCAACCCCGACGCCAAGCGCGGGCTTCAGTACCAAGGTG ATCCCGGACAGTAGGTGGAACGGAGGCTACTGCAACCGCGTGCAGGTCACCAATACCGGCACCGCCAGCGGCAACTGGTC GATCTCGCTGACAGTCACCGGCACCGTCAACAACGCCTGGAACGTTACCTGGTCACAGAGCGGCACCACACTCCAGGCCA GCGGCGTGGACTTCAACCGCACGCTGGCGCCCGGCGCCACTGCCGAGTTCGGCTTCTGCGCTGCAGGTTGA
Upstream 100 bases:
>100_bases CTCTTCTGTGGCAGCGGTCACGCCACACGGCGCAGCCGAAGACCAAGATGCCCCCCTCACCGCACTCGGCCGTCGAGTTC GGTCATCCAGGGAGACCATC
Downstream 100 bases:
>100_bases TGCAATGCGGCGGACACGCAGTGCGTGTCCGCCGTTGCATCGATGGACCAATGCTGATGCTTCCGTAGCAGCGCGCGGGC GCGAGGAACGTTACCGATAC
Product: extracellular endoglucanase precursor
Products: NA
Alternate protein names: Cellulase; Endo-1,4-beta-glucanase [H]
Number of amino acids: Translated: 476; Mature: 475
Protein sequence:
>476_residues MPIFRTASTLALATMLALTAAPAFSYSVSNNKIVDDNGNVVQLKGVNVFGFETGNHVMHGLWARNWKEMINQMQGLGFNA VRLPFCPATLRSGQMPSSIDYSRNADLQGLTSLQILDKVINEFNARGMYVLLDHHTPDCAAISELWYTSSYSEAQWLDDL RFVANRYKNVPRVIGVDLKNEPHGAATWGTGNAATDWNKAAERGSAAVLAVAPKWIIAVEGITDNPVCSTNGGIFWGGSL QPLACTPLNIPANRLLLAPHVYGPDVFVQSYFNDSNFPNNMPAIWDRHFGQFAGNHALLLGEFGGKYGEGDARDKVWQDA LVKYLRGKGINEGFYWSWNPNSGDTGGILRDDWISVREDKMTLLRTLWGTVSNSTPTPTPTPTPTPTPTPTPSAGFSTKV IPDSRWNGGYCNRVQVTNTGTASGNWSISLTVTGTVNNAWNVTWSQSGTTLQASGVDFNRTLAPGATAEFGFCAAG
Sequences:
>Translated_476_residues MPIFRTASTLALATMLALTAAPAFSYSVSNNKIVDDNGNVVQLKGVNVFGFETGNHVMHGLWARNWKEMINQMQGLGFNA VRLPFCPATLRSGQMPSSIDYSRNADLQGLTSLQILDKVINEFNARGMYVLLDHHTPDCAAISELWYTSSYSEAQWLDDL RFVANRYKNVPRVIGVDLKNEPHGAATWGTGNAATDWNKAAERGSAAVLAVAPKWIIAVEGITDNPVCSTNGGIFWGGSL QPLACTPLNIPANRLLLAPHVYGPDVFVQSYFNDSNFPNNMPAIWDRHFGQFAGNHALLLGEFGGKYGEGDARDKVWQDA LVKYLRGKGINEGFYWSWNPNSGDTGGILRDDWISVREDKMTLLRTLWGTVSNSTPTPTPTPTPTPTPTPTPSAGFSTKV IPDSRWNGGYCNRVQVTNTGTASGNWSISLTVTGTVNNAWNVTWSQSGTTLQASGVDFNRTLAPGATAEFGFCAAG >Mature_475_residues PIFRTASTLALATMLALTAAPAFSYSVSNNKIVDDNGNVVQLKGVNVFGFETGNHVMHGLWARNWKEMINQMQGLGFNAV RLPFCPATLRSGQMPSSIDYSRNADLQGLTSLQILDKVINEFNARGMYVLLDHHTPDCAAISELWYTSSYSEAQWLDDLR FVANRYKNVPRVIGVDLKNEPHGAATWGTGNAATDWNKAAERGSAAVLAVAPKWIIAVEGITDNPVCSTNGGIFWGGSLQ PLACTPLNIPANRLLLAPHVYGPDVFVQSYFNDSNFPNNMPAIWDRHFGQFAGNHALLLGEFGGKYGEGDARDKVWQDAL VKYLRGKGINEGFYWSWNPNSGDTGGILRDDWISVREDKMTLLRTLWGTVSNSTPTPTPTPTPTPTPTPTPSAGFSTKVI PDSRWNGGYCNRVQVTNTGTASGNWSISLTVTGTVNNAWNVTWSQSGTTLQASGVDFNRTLAPGATAEFGFCAAG
Specific function: Unknown
COG id: COG2730
COG function: function code G; Endoglucanase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 CBM2 (carbohydrate binding type-2) domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008965 - InterPro: IPR012291 - InterPro: IPR001919 - InterPro: IPR001547 - InterPro: IPR018087 - InterPro: IPR017853 - InterPro: IPR013781 [H]
Pfam domain/function: PF00553 CBM_2; PF00150 Cellulase [H]
EC number: =3.2.1.4 [H]
Molecular weight: Translated: 51678; Mature: 51547
Theoretical pI: Translated: 6.71; Mature: 6.71
Prosite motif: PS00659 GLYCOSYL_HYDROL_F5
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPIFRTASTLALATMLALTAAPAFSYSVSNNKIVDDNGNVVQLKGVNVFGFETGNHVMHG CCCCCCHHHHHHHHHHHHHHCCCEEEECCCCEEECCCCCEEEEECCEEEEEECCCHHHHH LWARNWKEMINQMQGLGFNAVRLPFCPATLRSGQMPSSIDYSRNADLQGLTSLQILDKVI HHHHHHHHHHHHHHCCCCCEEECCCCHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH NEFNARGMYVLLDHHTPDCAAISELWYTSSYSEAQWLDDLRFVANRYKNVPRVIGVDLKN HHHCCCCEEEEEECCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCC EPHGAATWGTGNAATDWNKAAERGSAAVLAVAPKWIIAVEGITDNPVCSTNGGIFWGGSL CCCCCEECCCCCCCCCHHHHHHCCCEEEEEECCEEEEEEECCCCCCEECCCCCEEECCCC QPLACTPLNIPANRLLLAPHVYGPDVFVQSYFNDSNFPNNMPAIWDRHFGQFAGNHALLL CCEEECCCCCCCCCEEEECCCCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCEEEE GEFGGKYGEGDARDKVWQDALVKYLRGKGINEGFYWSWNPNSGDTGGILRDDWISVREDK ECCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCEECCCCHHHHHHH MTLLRTLWGTVSNSTPTPTPTPTPTPTPTPTPSAGFSTKVIPDSRWNGGYCNRVQVTNTG HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCEEEEECCC TASGNWSISLTVTGTVNNAWNVTWSQSGTTLQASGVDFNRTLAPGATAEFGFCAAG CCCCCEEEEEEEEEECCCCEEEEECCCCCEEEECCCCCCCEECCCCCCCCCEEECC >Mature Secondary Structure PIFRTASTLALATMLALTAAPAFSYSVSNNKIVDDNGNVVQLKGVNVFGFETGNHVMHG CCCCCHHHHHHHHHHHHHHCCCEEEECCCCEEECCCCCEEEEECCEEEEEECCCHHHHH LWARNWKEMINQMQGLGFNAVRLPFCPATLRSGQMPSSIDYSRNADLQGLTSLQILDKVI HHHHHHHHHHHHHHCCCCCEEECCCCHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH NEFNARGMYVLLDHHTPDCAAISELWYTSSYSEAQWLDDLRFVANRYKNVPRVIGVDLKN HHHCCCCEEEEEECCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCC EPHGAATWGTGNAATDWNKAAERGSAAVLAVAPKWIIAVEGITDNPVCSTNGGIFWGGSL CCCCCEECCCCCCCCCHHHHHHCCCEEEEEECCEEEEEEECCCCCCEECCCCCEEECCCC QPLACTPLNIPANRLLLAPHVYGPDVFVQSYFNDSNFPNNMPAIWDRHFGQFAGNHALLL CCEEECCCCCCCCCEEEECCCCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCEEEE GEFGGKYGEGDARDKVWQDALVKYLRGKGINEGFYWSWNPNSGDTGGILRDDWISVREDK ECCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCEECCCCHHHHHHH MTLLRTLWGTVSNSTPTPTPTPTPTPTPTPTPSAGFSTKVIPDSRWNGGYCNRVQVTNTG HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCEEEEECCC TASGNWSISLTVTGTVNNAWNVTWSQSGTTLQASGVDFNRTLAPGATAEFGFCAAG CCCCCEEEEEEEEEECCCCEEEEECCCCCEEEECCCCCCCEECCCCCCCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2373365; 12024217 [H]