| Definition | Xanthomonas campestris pv. vesicatoria str. 85-10 chromosome, complete genome. |
|---|---|
| Accession | NC_007508 |
| Length | 5,178,466 |
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The map label for this gene is 78046224
Identifier: 78046224
GI number: 78046224
Start: 755629
End: 756213
Strand: Reverse
Name: 78046224
Synonym: XCV0668
Alternate gene names: NA
Gene position: 756213-755629 (Counterclockwise)
Preceding gene: 78046225
Following gene: 78046222
Centisome position: 14.6
GC content: 65.81
Gene sequence:
>585_bases GTGAGCGATATCGCCTGCCACGCACACGAGCGCTCGCGCCTGTGCGGCAGGCGATGTCGGTGGCATGTGCAGCAATCACG GCGACTGATGGTTTGGGATCGGCACAAGAAGACCGCCATCTGCCGTGCGTCCGCATCAGGGTTCGCCGCAATCGTGGGCC GACCCCACCACGCCAGCCTGCGCGAAGCGATGGTGGGGTGCTGTAAAGCGACTGACCGGGCACCTGAGCATCAACCGCGG CGCGCAACGTGCCGGGGTCGGTCTCGACGCGCTCTATCGAGCGTTCCCCAGGCACGGACGCGTATCGTTGCCTTTTTGCG ACGCGGGCGCGGCGTCTTCCCGGCGAGGCTGTCCCACGCGATAGCCCGTTGGCGTGTGCCATCGGTGTGCTCTGCGTCGT CCCACTCGCTTGACGCCGCCGGCAACCGTTGGCTGCCGCGCCGATCCGATGCCCACCGTCACGCAGTCAGGCACTGGCTA TTTGCGGTTTGCGTTTTGCGGTTTGGGTTTGCACCTAACAGCAGAAGTACGCAGTTTCCGGCAGTGCGCATGAGCTGCCC CGCACCCACACCACGCCACGCCTAA
Upstream 100 bases:
>100_bases CGGATGCCGGAACACCGCCGGTACGTGGCGCAACGAACGCGCTTGCCGCTACGAAGCCGGCGGCCGCCAAGCACGCTGTG CACGAGCACAGGCGACGTGC
Downstream 100 bases:
>100_bases GATCGAGGCGCTTGCCCCTCTGGCTGCCGCGCGCGCTTGGCTGCATACATCGCCTCGTCAGCGGCATGCATCAAACTGGA CGCCTCGGCTTGTGCGCCGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 194; Mature: 193
Protein sequence:
>194_residues MSDIACHAHERSRLCGRRCRWHVQQSRRLMVWDRHKKTAICRASASGFAAIVGRPHHASLREAMVGCCKATDRAPEHQPR RATCRGRSRRALSSVPQARTRIVAFLRRGRGVFPARLSHAIARWRVPSVCSASSHSLDAAGNRWLPRRSDAHRHAVRHWL FAVCVLRFGFAPNSRSTQFPAVRMSCPAPTPRHA
Sequences:
>Translated_194_residues MSDIACHAHERSRLCGRRCRWHVQQSRRLMVWDRHKKTAICRASASGFAAIVGRPHHASLREAMVGCCKATDRAPEHQPR RATCRGRSRRALSSVPQARTRIVAFLRRGRGVFPARLSHAIARWRVPSVCSASSHSLDAAGNRWLPRRSDAHRHAVRHWL FAVCVLRFGFAPNSRSTQFPAVRMSCPAPTPRHA >Mature_193_residues SDIACHAHERSRLCGRRCRWHVQQSRRLMVWDRHKKTAICRASASGFAAIVGRPHHASLREAMVGCCKATDRAPEHQPRR ATCRGRSRRALSSVPQARTRIVAFLRRGRGVFPARLSHAIARWRVPSVCSASSHSLDAAGNRWLPRRSDAHRHAVRHWLF AVCVLRFGFAPNSRSTQFPAVRMSCPAPTPRHA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21918; Mature: 21786
Theoretical pI: Translated: 12.43; Mature: 12.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.2 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 7.2 %Cys+Met (Translated Protein) 5.2 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 6.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDIACHAHERSRLCGRRCRWHVQQSRRLMVWDRHKKTAICRASASGFAAIVGRPHHASL CCCCHHCHHHHHHHHHHHHHHHHHHCCEEEEEECCCHHHHHHCCCCCCEEEECCCCHHHH REAMVGCCKATDRAPEHQPRRATCRGRSRRALSSVPQARTRIVAFLRRGRGVFPARLSHA HHHHHHHHHHCCCCCCCCCCHHHHCCHHHHHHHHCHHHHHHHHHHHHHCCCCCHHHHHHH IARWRVPSVCSASSHSLDAAGNRWLPRRSDAHRHAVRHWLFAVCVLRFGFAPNSRSTQFP HHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC AVRMSCPAPTPRHA EEEEECCCCCCCCC >Mature Secondary Structure SDIACHAHERSRLCGRRCRWHVQQSRRLMVWDRHKKTAICRASASGFAAIVGRPHHASL CCCHHCHHHHHHHHHHHHHHHHHHCCEEEEEECCCHHHHHHCCCCCCEEEECCCCHHHH REAMVGCCKATDRAPEHQPRRATCRGRSRRALSSVPQARTRIVAFLRRGRGVFPARLSHA HHHHHHHHHHCCCCCCCCCCHHHHCCHHHHHHHHCHHHHHHHHHHHHHCCCCCHHHHHHH IARWRVPSVCSASSHSLDAAGNRWLPRRSDAHRHAVRHWLFAVCVLRFGFAPNSRSTQFP HHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC AVRMSCPAPTPRHA EEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA