| Definition | Xanthomonas campestris pv. vesicatoria str. 85-10 chromosome, complete genome. |
|---|---|
| Accession | NC_007508 |
| Length | 5,178,466 |
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The map label for this gene is 78046206
Identifier: 78046206
GI number: 78046206
Start: 733391
End: 734032
Strand: Reverse
Name: 78046206
Synonym: XCV0650
Alternate gene names: NA
Gene position: 734032-733391 (Counterclockwise)
Preceding gene: 78046207
Following gene: 78046205
Centisome position: 14.17
GC content: 66.2
Gene sequence:
>642_bases ATGATCACGCGAGGCCGGCATGACGGTTACCGCGGCGGTTGCAGCGTGCCGCCGGCGGGATCTGCGATACTGCCGCGCCC TCGACACGGACGTTGCATGCGCGCCCATTTGATCATTGCCCTGCTGGTCTGGCTACTGCCGGTCACTGCGACACCAACAC ACGCGCAGACGGCATCGGCAAGCGCAGCATCACAGCCGATGTCGGAAGTGACCACGCGCTATCCGGTGACCACCGCAACG ATGGGCGGGCGTGTGATCCGCCTGGGCGAACACCAGGGCAAGTGCGCGGTGTCGCGCGACGGCGACATCGTGGTACTGAG CATCGGTGCACCTTGCTACTTCAGCACCGATCGCCAACATGCCGCGCAGGTCCATCGCTTCCATGGCAGCGACGTCGTGC TGGTACAGCACGCGCATCCAACGTCGCGACCAGACTGGGATGTGGCCGTCTACGGGCCCATCTGCGCCTTCGAAGCGCAG GCGGTACGCGAGATCGGCGGCGTGCTGGAACCCGGCGGTGTCGCCGGTTCCTGGCATTGCGACCCGACCGCCGGCGCCGA CCAGAAGCAGTTCGTCTACAGCTACGACACCTGGCCCAGGCACGGTGCGCGGCGACCTGCGCGCAAGCAAAAAGCGCATT GA
Upstream 100 bases:
>100_bases GAGTGGTGCCTCCACGCCATTGACGCTGGCGATACGGCCCGCGCGATCATCGCGTGGCGAATGCAAGACGGCGTCCACTC GCGGCACGCATGCGCACTGC
Downstream 100 bases:
>100_bases TGGTTGCGCGAGCGCCGCGGGGCGATGCGAATCCGGCCTGCTTTTGGTCAGCGCTGTTTGCCCGACACGCCGTTTGCGCC GCGCACCAGCATTTGCACGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 213; Mature: 213
Protein sequence:
>213_residues MITRGRHDGYRGGCSVPPAGSAILPRPRHGRCMRAHLIIALLVWLLPVTATPTHAQTASASAASQPMSEVTTRYPVTTAT MGGRVIRLGEHQGKCAVSRDGDIVVLSIGAPCYFSTDRQHAAQVHRFHGSDVVLVQHAHPTSRPDWDVAVYGPICAFEAQ AVREIGGVLEPGGVAGSWHCDPTAGADQKQFVYSYDTWPRHGARRPARKQKAH
Sequences:
>Translated_213_residues MITRGRHDGYRGGCSVPPAGSAILPRPRHGRCMRAHLIIALLVWLLPVTATPTHAQTASASAASQPMSEVTTRYPVTTAT MGGRVIRLGEHQGKCAVSRDGDIVVLSIGAPCYFSTDRQHAAQVHRFHGSDVVLVQHAHPTSRPDWDVAVYGPICAFEAQ AVREIGGVLEPGGVAGSWHCDPTAGADQKQFVYSYDTWPRHGARRPARKQKAH >Mature_213_residues MITRGRHDGYRGGCSVPPAGSAILPRPRHGRCMRAHLIIALLVWLLPVTATPTHAQTASASAASQPMSEVTTRYPVTTAT MGGRVIRLGEHQGKCAVSRDGDIVVLSIGAPCYFSTDRQHAAQVHRFHGSDVVLVQHAHPTSRPDWDVAVYGPICAFEAQ AVREIGGVLEPGGVAGSWHCDPTAGADQKQFVYSYDTWPRHGARRPARKQKAH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22996; Mature: 22996
Theoretical pI: Translated: 9.56; Mature: 9.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MITRGRHDGYRGGCSVPPAGSAILPRPRHGRCMRAHLIIALLVWLLPVTATPTHAQTASA CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCC SAASQPMSEVTTRYPVTTATMGGRVIRLGEHQGKCAVSRDGDIVVLSIGAPCYFSTDRQH HHHHCCHHHHHHCCCEEEECCCCEEEEECCCCCCEEEECCCCEEEEEECCCEEECCCHHH AAQVHRFHGSDVVLVQHAHPTSRPDWDVAVYGPICAFEAQAVREIGGVLEPGGVAGSWHC HHHHHHCCCCCEEEEECCCCCCCCCCCEEEECCHHHHHHHHHHHHCCCCCCCCCCCCCCC DPTAGADQKQFVYSYDTWPRHGARRPARKQKAH CCCCCCCCCEEEEEECCCCCCCCCCCCHHCCCC >Mature Secondary Structure MITRGRHDGYRGGCSVPPAGSAILPRPRHGRCMRAHLIIALLVWLLPVTATPTHAQTASA CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCC SAASQPMSEVTTRYPVTTATMGGRVIRLGEHQGKCAVSRDGDIVVLSIGAPCYFSTDRQH HHHHCCHHHHHHCCCEEEECCCCEEEEECCCCCCEEEECCCCEEEEEECCCEEECCCHHH AAQVHRFHGSDVVLVQHAHPTSRPDWDVAVYGPICAFEAQAVREIGGVLEPGGVAGSWHC HHHHHHCCCCCEEEEECCCCCCCCCCCEEEECCHHHHHHHHHHHHCCCCCCCCCCCCCCC DPTAGADQKQFVYSYDTWPRHGARRPARKQKAH CCCCCCCCCEEEEEECCCCCCCCCCCCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA