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The map label for this gene is insF1 [C]

Identifier: 78046174

GI number: 78046174

Start: 700576

End: 701277

Strand: Reverse

Name: insF1 [C]

Synonym: XCV0618

Alternate gene names: 78046174

Gene position: 701277-700576 (Counterclockwise)

Preceding gene: 78046175

Following gene: 78046171

Centisome position: 13.54

GC content: 62.54

Gene sequence:

>702_bases
ATGCACCTGCAGACGTATCAAGCCTATGGTGCCCTGCGCATGTGGCAAGCCCTGCGCCAGCACGGTGAAACCTGTGGCCG
GCATCGGGTAGAGCGACTGCGTCGAGCGCACGGCATCCGCAGCAAGCGCCGTCAGCGCTATCTGCGCACGCGTAGCACCT
ACCAACGCACCATGGTGGCGCCGAACCGCTTGGCATGGCCCTTCGTCAGCCCTGGACGCGATCGGGTCTGGGTCGCCGAT
ATCACCTTCGTGCCCACCCGCGGCGGTTGGCTGTACCTGGCAGCGATACTGGACATGCACAGCCGTCACCTTGCGGGCTG
GGCGATGGGCGCTCGTGCCGACCAAGCCCTGGCCAGTGCGGCGTTGGAGATGGCACTACAACGCCGTCGACCATCAAAGG
GCACCATCCATCACAGCGATCAGGGCTCGCAGTACACCAGCGGCGCGTATCAGCGGCAGTTGCAGGCGGCGGGCTTGGTG
GCAAGCATGAGCCGCAAAGGCATGCCGTACGACAACGCAGTGATGGAAAGCTTCTTCAGTTCGCTCAAGCAGGAGCTGAC
GCACCACGAGCAGTTTGTAAGCCTCGACGAGGCACGCGCAAAGCTATTCACATACATCGAGGTGTTCTACAACCGCCAGC
GCCTGCGCAGTGCTTTGGGCTATCGCTCGCCGGTCGAGTTTGAAAGGACGGATGTTCCTTAA

Upstream 100 bases:

>100_bases
CGCACTGGGGGTATCTCCGAGCGGCTATTACGCGTGGCGCGGACGCCGTCCTGGAGCGCGTGTGCAAGAGAACGCGCGGT
TATTGGAGCGGATCAAAGAC

Downstream 100 bases:

>100_bases
TTAAACGGTCCGAGAAATCGGGGATGGTCCAACCTGACCCCGTTATTTGGCAATCGGGAAACACGACGATGCCACCTCGA
CAACGTCACCCCAAGGACTG

Product: transposase

Products: NA

Alternate protein names: ISO-S3 31 kDa protein [H]

Number of amino acids: Translated: 233; Mature: 233

Protein sequence:

>233_residues
MHLQTYQAYGALRMWQALRQHGETCGRHRVERLRRAHGIRSKRRQRYLRTRSTYQRTMVAPNRLAWPFVSPGRDRVWVAD
ITFVPTRGGWLYLAAILDMHSRHLAGWAMGARADQALASAALEMALQRRRPSKGTIHHSDQGSQYTSGAYQRQLQAAGLV
ASMSRKGMPYDNAVMESFFSSLKQELTHHEQFVSLDEARAKLFTYIEVFYNRQRLRSALGYRSPVEFERTDVP

Sequences:

>Translated_233_residues
MHLQTYQAYGALRMWQALRQHGETCGRHRVERLRRAHGIRSKRRQRYLRTRSTYQRTMVAPNRLAWPFVSPGRDRVWVAD
ITFVPTRGGWLYLAAILDMHSRHLAGWAMGARADQALASAALEMALQRRRPSKGTIHHSDQGSQYTSGAYQRQLQAAGLV
ASMSRKGMPYDNAVMESFFSSLKQELTHHEQFVSLDEARAKLFTYIEVFYNRQRLRSALGYRSPVEFERTDVP
>Mature_233_residues
MHLQTYQAYGALRMWQALRQHGETCGRHRVERLRRAHGIRSKRRQRYLRTRSTYQRTMVAPNRLAWPFVSPGRDRVWVAD
ITFVPTRGGWLYLAAILDMHSRHLAGWAMGARADQALASAALEMALQRRRPSKGTIHHSDQGSQYTSGAYQRQLQAAGLV
ASMSRKGMPYDNAVMESFFSSLKQELTHHEQFVSLDEARAKLFTYIEVFYNRQRLRSALGYRSPVEFERTDVP

Specific function: Involved in the transposition of the insertion sequence is3 [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 integrase catalytic domain [H]

Homologues:

Organism=Homo sapiens, GI310129419, Length=181, Percent_Identity=34.2541436464088, Blast_Score=112, Evalue=4e-25,
Organism=Escherichia coli, GI1788405, Length=226, Percent_Identity=41.5929203539823, Blast_Score=165, Evalue=3e-42,
Organism=Escherichia coli, GI1787263, Length=226, Percent_Identity=41.5929203539823, Blast_Score=165, Evalue=3e-42,
Organism=Escherichia coli, GI1786753, Length=226, Percent_Identity=41.5929203539823, Blast_Score=165, Evalue=3e-42,
Organism=Escherichia coli, GI1786570, Length=226, Percent_Identity=41.5929203539823, Blast_Score=165, Evalue=3e-42,
Organism=Escherichia coli, GI1786490, Length=226, Percent_Identity=41.5929203539823, Blast_Score=165, Evalue=3e-42,
Organism=Escherichia coli, GI1789981, Length=220, Percent_Identity=30.9090909090909, Blast_Score=112, Evalue=2e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001584
- InterPro:   IPR012337 [H]

Pfam domain/function: PF00665 rve [H]

EC number: NA

Molecular weight: Translated: 26970; Mature: 26970

Theoretical pI: Translated: 11.30; Mature: 11.30

Prosite motif: PS50994 INTEGRASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHLQTYQAYGALRMWQALRQHGETCGRHRVERLRRAHGIRSKRRQRYLRTRSTYQRTMVA
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCC
PNRLAWPFVSPGRDRVWVADITFVPTRGGWLYLAAILDMHSRHLAGWAMGARADQALASA
CCCCCCCCCCCCCCEEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
ALEMALQRRRPSKGTIHHSDQGSQYTSGAYQRQLQAAGLVASMSRKGMPYDNAVMESFFS
HHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
SLKQELTHHEQFVSLDEARAKLFTYIEVFYNRQRLRSALGYRSPVEFERTDVP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure
MHLQTYQAYGALRMWQALRQHGETCGRHRVERLRRAHGIRSKRRQRYLRTRSTYQRTMVA
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCC
PNRLAWPFVSPGRDRVWVADITFVPTRGGWLYLAAILDMHSRHLAGWAMGARADQALASA
CCCCCCCCCCCCCCEEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
ALEMALQRRRPSKGTIHHSDQGSQYTSGAYQRQLQAAGLVASMSRKGMPYDNAVMESFFS
HHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
SLKQELTHHEQFVSLDEARAKLFTYIEVFYNRQRLRSALGYRSPVEFERTDVP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2824781 [H]