| Definition | Xanthomonas campestris pv. vesicatoria str. 85-10 chromosome, complete genome. |
|---|---|
| Accession | NC_007508 |
| Length | 5,178,466 |
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The map label for this gene is 78046053
Identifier: 78046053
GI number: 78046053
Start: 563348
End: 563884
Strand: Reverse
Name: 78046053
Synonym: XCV0497
Alternate gene names: NA
Gene position: 563884-563348 (Counterclockwise)
Preceding gene: 78046054
Following gene: 78046052
Centisome position: 10.89
GC content: 59.96
Gene sequence:
>537_bases ATGGCAACGATCGACTCCTTCGTTCCAGCAGGATCGAAGGCACTGGATACCCAACGCGGCGACCTGACTGGCGCCGGACA TTCGGACGCACTTGTCGTGATTTCTCCGCCGGCAACCGGCAACGAAAAGCTCGGCGAAGGGCAGCCACGTCGCGTCCTGC TGCTGACCCAGAACGCCGATGGCAGCGTGCAAAAGGCCGCTGAAAATAATCGCATCGTGCCCTGTGCCCGCTGCGGCGGT CTGGCAGGCGACCCGTATGCGTTTTCGCGCGTCCAGCCCGGGCAATTCACCATCTCCATCTCAGGCGGCTCGCGCGAGCG CTGGGCCGACGACTTCACGTTCAAGTATTCGGCAGACAAGCAGACCTGGTTGCTGGACAAGGTCGTGCGCGATCTTTCCG ATACCGAGACCGAACAACACAACACCCTGGAATTAACCGACAAGGATTTTGGGACGGTGACGTTCCAGGACTTCGACCCC GTCACGCTCAAGAAAGTCGCGGCGCTGGATGAGGCTGGAGCCCAGAAACAAAATTAA
Upstream 100 bases:
>100_bases CGATGCGCCTGAAACGCCGGCCAATGCACCCGCAGCCGCGGCTGGCCCACCCGCACCGGCCGCGACACCTCCTGCCACAC CGACACAAGGGACTGTACCC
Downstream 100 bases:
>100_bases AGGGAAGTAATGGCTGACACGGACAAGGATGGGTCCGTCTTTTCATGTTGCTGAGAAATGAGGAGTTACACCATGGCAAC CGATCGCGAAACTGGGCTGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 178; Mature: 177
Protein sequence:
>178_residues MATIDSFVPAGSKALDTQRGDLTGAGHSDALVVISPPATGNEKLGEGQPRRVLLLTQNADGSVQKAAENNRIVPCARCGG LAGDPYAFSRVQPGQFTISISGGSRERWADDFTFKYSADKQTWLLDKVVRDLSDTETEQHNTLELTDKDFGTVTFQDFDP VTLKKVAALDEAGAQKQN
Sequences:
>Translated_178_residues MATIDSFVPAGSKALDTQRGDLTGAGHSDALVVISPPATGNEKLGEGQPRRVLLLTQNADGSVQKAAENNRIVPCARCGG LAGDPYAFSRVQPGQFTISISGGSRERWADDFTFKYSADKQTWLLDKVVRDLSDTETEQHNTLELTDKDFGTVTFQDFDP VTLKKVAALDEAGAQKQN >Mature_177_residues ATIDSFVPAGSKALDTQRGDLTGAGHSDALVVISPPATGNEKLGEGQPRRVLLLTQNADGSVQKAAENNRIVPCARCGGL AGDPYAFSRVQPGQFTISISGGSRERWADDFTFKYSADKQTWLLDKVVRDLSDTETEQHNTLELTDKDFGTVTFQDFDPV TLKKVAALDEAGAQKQN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19173; Mature: 19042
Theoretical pI: Translated: 4.70; Mature: 4.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATIDSFVPAGSKALDTQRGDLTGAGHSDALVVISPPATGNEKLGEGQPRRVLLLTQNAD CCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCEEEEEEECCC GSVQKAAENNRIVPCARCGGLAGDPYAFSRVQPGQFTISISGGSRERWADDFTFKYSADK CCHHHHHCCCCEEEHHHHCCCCCCCCEECCCCCCEEEEEECCCCCCCCCCCEEEEECCCC QTWLLDKVVRDLSDTETEQHNTLELTDKDFGTVTFQDFDPVTLKKVAALDEAGAQKQN CHHHHHHHHHHHHCCCCCCCCEEEECCCCCCEEEECCCCCHHHHHHHHHHHCCCCCCC >Mature Secondary Structure ATIDSFVPAGSKALDTQRGDLTGAGHSDALVVISPPATGNEKLGEGQPRRVLLLTQNAD CCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCEEEEEEECCC GSVQKAAENNRIVPCARCGGLAGDPYAFSRVQPGQFTISISGGSRERWADDFTFKYSADK CCHHHHHCCCCEEEHHHHCCCCCCCCEECCCCCCEEEEEECCCCCCCCCCCEEEEECCCC QTWLLDKVVRDLSDTETEQHNTLELTDKDFGTVTFQDFDPVTLKKVAALDEAGAQKQN CHHHHHHHHHHHHCCCCCCCCEEEECCCCCCEEEECCCCCHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA