Click here to switch to the map view.

The map label for this gene is aspH

Identifier: 78045953

GI number: 78045953

Start: 450292

End: 451197

Strand: Reverse

Name: aspH

Synonym: XCV0397

Alternate gene names: NA

Gene position: 451197-450292 (Counterclockwise)

Preceding gene: 78045954

Following gene: 78045949

Centisome position: 8.71

GC content: 63.47

Gene sequence:

>906_bases
ATGTTGAAGTGGCTCCTCATCGCGCTGTTCATCGCATCGGCGCTCTACATCCATTATCGCGGTCGCGTGCGGCACCGGCT
CAGCCGGCAGTTGCTGGACCATTCCACCTTCATGGCCCCCATCAACACACTGATGTACCTGTGTTCGCGGGTGCCGACCA
CCCCGTTCATCGACCCGGGCAAGGAATTTCCCGAGCTGGCGCCGCTGCGCGCGAGCTGGCCACTGATCCGCGACGAAGCG
GTGGCGTTGCAACAAATGCAGAAGATCCGCGCTGCCGAAGGCTATACCGACATCGGCTTCAATTCGTTCTTCCGGCGTGG
CTGGAAGCGCTTCTATCTGAAGTGGTACGGCACCGCGCATCCGTCTGCCGCCGAATTGTGTCCGCAGACCACCGCCCTGC
TGAAATCCATTCCCACGGTCAAGGCCGCGATGTTCGCCGAGCTGCCGCCGGGCAGCGAACTTCGCCCGCACCGCGACCCG
TTCGCCGGCTCCATGCGCCTGCACCTGGGCCTGGCCACACCGAACGACGACCGTTGCTTCATCGACGTCGACGGCCAGCG
CCACAGCTGGCGCGATGGCGAGTGGACCATGTTCGACGAGACCTATATCCATTACGCGCGCAACGACACCGACCAGGACC
GCATCATCCTGTTCTGCGATATCGAACGCCCGATGCGTTGGCGCTGGGCGGCGGCGGTGAACCGCTTCGTCGGCCGCAGC
CTGCTCTCGGCCGGCGCCTCGCCCAATCAGGAAGGCGACAAGACCGGCGGCATCAATCGCGTGTTCCGCTATTTCTACGC
CGCCCGCCTCAAGGCCAAGGCGCTGAAGGAACGCAACAACCCGCTGTACCAGGTGCTCAAGTGGAGCATCTTCATCCTGG
TGGTGGTCGGGATCGTGTTGCTGTAA

Upstream 100 bases:

>100_bases
TTGTTCGATGGTGGCTACCGACACGACGCAGCAGTGCTGCGTGCGTTTATTGGCAGCCACTCTCACGTTTGCGGCCCCCC
GCCCCCAATCGGCCTCCCTC

Downstream 100 bases:

>100_bases
TCCCCGCCTACCCGCGTAGAAGCGCACCCGGGCGCGAGCGTCGTCGTCGATAACGCCTCATCGCGCCCAGGTGCGCTGCT
ACGCAGCGTTGGTCGATGCG

Product: peptide-aspartate beta-dioxygenase

Products: NA

Alternate protein names: Beta-Hydroxylase; Asparaginyl Beta-Hydroxylase; Membrane-Bound Beta-Hydroxylase; Lipid A-Myristate Beta-Hydroxylase; Aspartyl-Asparaginyl Beta-Hydroxylase; Aspartyl/Asparaginyl Beta-Hydroxylase Family Protein; Aspartyl/Asparaginyl Beta-Hydroxylase Family; Lipopolysaccharide Biosynthetic; Peptide-Aspartate Beta-Dioxygenase; Aspartyl/Asparaginyl Beta-Hydroxylase Transmembrane Protein; Beta-Hydroxylase Aspartyl/Asparaginyl Family; Peptide Aspartate B-Dioxygenase; Aspartyl/Asparaginyl-Beta-Hydroxylase; Hydroxylase; Peptide-Aspartate B-Dioxygenase; Aspartate Beta-Hydroxylase; Lipopolysaccharide Biosynthetic Protein; Fe(2+)/Alpha-Ketoglutarate-Dependent Dioxygenase LpxO; Dioxygenase; Aspartyl/Asparaginyl Beta-Hydroxylase Protein

Number of amino acids: Translated: 301; Mature: 301

Protein sequence:

>301_residues
MLKWLLIALFIASALYIHYRGRVRHRLSRQLLDHSTFMAPINTLMYLCSRVPTTPFIDPGKEFPELAPLRASWPLIRDEA
VALQQMQKIRAAEGYTDIGFNSFFRRGWKRFYLKWYGTAHPSAAELCPQTTALLKSIPTVKAAMFAELPPGSELRPHRDP
FAGSMRLHLGLATPNDDRCFIDVDGQRHSWRDGEWTMFDETYIHYARNDTDQDRIILFCDIERPMRWRWAAAVNRFVGRS
LLSAGASPNQEGDKTGGINRVFRYFYAARLKAKALKERNNPLYQVLKWSIFILVVVGIVLL

Sequences:

>Translated_301_residues
MLKWLLIALFIASALYIHYRGRVRHRLSRQLLDHSTFMAPINTLMYLCSRVPTTPFIDPGKEFPELAPLRASWPLIRDEA
VALQQMQKIRAAEGYTDIGFNSFFRRGWKRFYLKWYGTAHPSAAELCPQTTALLKSIPTVKAAMFAELPPGSELRPHRDP
FAGSMRLHLGLATPNDDRCFIDVDGQRHSWRDGEWTMFDETYIHYARNDTDQDRIILFCDIERPMRWRWAAAVNRFVGRS
LLSAGASPNQEGDKTGGINRVFRYFYAARLKAKALKERNNPLYQVLKWSIFILVVVGIVLL
>Mature_301_residues
MLKWLLIALFIASALYIHYRGRVRHRLSRQLLDHSTFMAPINTLMYLCSRVPTTPFIDPGKEFPELAPLRASWPLIRDEA
VALQQMQKIRAAEGYTDIGFNSFFRRGWKRFYLKWYGTAHPSAAELCPQTTALLKSIPTVKAAMFAELPPGSELRPHRDP
FAGSMRLHLGLATPNDDRCFIDVDGQRHSWRDGEWTMFDETYIHYARNDTDQDRIILFCDIERPMRWRWAAAVNRFVGRS
LLSAGASPNQEGDKTGGINRVFRYFYAARLKAKALKERNNPLYQVLKWSIFILVVVGIVLL

Specific function: Unknown

COG id: COG3555

COG function: function code O; Aspartyl/asparaginyl beta-hydroxylase and related dioxygenases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI194328779, Length=184, Percent_Identity=27.7173913043478, Blast_Score=67, Evalue=2e-11,
Organism=Homo sapiens, GI14589866, Length=161, Percent_Identity=27.3291925465839, Blast_Score=67, Evalue=2e-11,
Organism=Homo sapiens, GI258613943, Length=161, Percent_Identity=27.3291925465839, Blast_Score=67, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34750; Mature: 34750

Theoretical pI: Translated: 10.15; Mature: 10.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKWLLIALFIASALYIHYRGRVRHRLSRQLLDHSTFMAPINTLMYLCSRVPTTPFIDPG
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
KEFPELAPLRASWPLIRDEAVALQQMQKIRAAEGYTDIGFNSFFRRGWKRFYLKWYGTAH
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHEECCCC
PSAAELCPQTTALLKSIPTVKAAMFAELPPGSELRPHRDPFAGSMRLHLGLATPNDDRCF
CCHHHHCHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCEEE
IDVDGQRHSWRDGEWTMFDETYIHYARNDTDQDRIILFCDIERPMRWRWAAAVNRFVGRS
EEECCCCCCCCCCCEEEEHHHHHEECCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHH
LLSAGASPNQEGDKTGGINRVFRYFYAARLKAKALKERNNPLYQVLKWSIFILVVVGIVL
HHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
L
C
>Mature Secondary Structure
MLKWLLIALFIASALYIHYRGRVRHRLSRQLLDHSTFMAPINTLMYLCSRVPTTPFIDPG
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
KEFPELAPLRASWPLIRDEAVALQQMQKIRAAEGYTDIGFNSFFRRGWKRFYLKWYGTAH
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHEECCCC
PSAAELCPQTTALLKSIPTVKAAMFAELPPGSELRPHRDPFAGSMRLHLGLATPNDDRCF
CCHHHHCHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCEEE
IDVDGQRHSWRDGEWTMFDETYIHYARNDTDQDRIILFCDIERPMRWRWAAAVNRFVGRS
EEECCCCCCCCCCCEEEEHHHHHEECCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHH
LLSAGASPNQEGDKTGGINRVFRYFYAARLKAKALKERNNPLYQVLKWSIFILVVVGIVL
HHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
L
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA