| Definition | Xanthomonas campestris pv. vesicatoria str. 85-10 chromosome, complete genome. |
|---|---|
| Accession | NC_007508 |
| Length | 5,178,466 |
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The map label for this gene is qorB [H]
Identifier: 78045905
GI number: 78045905
Start: 401462
End: 402340
Strand: Reverse
Name: qorB [H]
Synonym: XCV0349
Alternate gene names: 78045905
Gene position: 402340-401462 (Counterclockwise)
Preceding gene: 78045907
Following gene: 78045904
Centisome position: 7.77
GC content: 69.06
Gene sequence:
>879_bases ATGACATCTACATCCCCCCTGATTCTTGTCACCGGCGCCAGCGGGCAGTTGGGTGCGCTGGTTGTCGAAGCGCTGCTTGG CCATCTGCCTGCCAACCGCATCGTAGCAACGGCGCGGGATACCGCGTCACTTGCCGAGTTCGCAAAACGCGACATCGCGG TACGTCAGGCCGACTATGCGAACCCGCAAAGCCTGGACACCGCCTTCGCCGGCGTGGGCCGCGTGTTGCTGGTCTCGTCC AATGCGGTCGGCCAGCGCGTGCCGCAACACCGCAACGTGATCGAGGCTGCAAGGCGCGCCGGGGTGGAACTGCTGGCGTA TACGAGCATCCTGCATGCCGATACCAGCACGCTGTCGCTGGCCGCCGAGCATGTGGCCACCGAGGCGCTGCTGCGCGAGA GCGGCGTGCCGCACGCGTTGTTGCGCAATGGCTGGTACACCGAGAACTACACCGGCTCGATCGCCGCAGAAGTCGCCCAC GGCGCGGTGATCGGCAGTGCGGGCGACGGCAAAATCAGCGCCGCCACGCGCGCCGACTATGCTGCGGCGGCGGCTGCAGT ACTGGCTTCGGACGCCCCACAGGCCGGCCAGGTGTACGAGCTGGCAGGCGATGCCGCTTTCACGATGGCCGAGTACGCCG CCGAGGTGGCGCAGCAGTCGGGCAAGCCGGTGGCCTATCACGACCTGCCGGAAGCCGATTACGCGGCAGCGCTGGTGCAG ATCGGCCTGCCGGCCGGCTTTGCGCAGGTGCTGGCGCAGTGCTCGGCCGCCTCGCGCGACGGCGCCCTGTTCGATGAGAG CCAGACGCTGGGCCGGTTGATCGGCCGCCCCACCACGCCGTTGCGCGACGCGGTGGCGGCGGCACTCGCGGCGCGCTGA
Upstream 100 bases:
>100_bases GCCTCCTTGCGGAGGCCGGGGCGGGGCTGACACTATGCGGGCGACCAATGAGGTCTAGATAGTAGACCAAATCTCTTATG CAAACCTAACGGAGCCCGTC
Downstream 100 bases:
>100_bases GTCACGGCGCGACCACTGCGCTGCCCAGCCGTTCGGCACGCAGTGGTTCGCGCAGCGTTGAGCAAGTGCGACGTGACCCC TTGGAACCCGGCGAACTTCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 292; Mature: 291
Protein sequence:
>292_residues MTSTSPLILVTGASGQLGALVVEALLGHLPANRIVATARDTASLAEFAKRDIAVRQADYANPQSLDTAFAGVGRVLLVSS NAVGQRVPQHRNVIEAARRAGVELLAYTSILHADTSTLSLAAEHVATEALLRESGVPHALLRNGWYTENYTGSIAAEVAH GAVIGSAGDGKISAATRADYAAAAAAVLASDAPQAGQVYELAGDAAFTMAEYAAEVAQQSGKPVAYHDLPEADYAAALVQ IGLPAGFAQVLAQCSAASRDGALFDESQTLGRLIGRPTTPLRDAVAAALAAR
Sequences:
>Translated_292_residues MTSTSPLILVTGASGQLGALVVEALLGHLPANRIVATARDTASLAEFAKRDIAVRQADYANPQSLDTAFAGVGRVLLVSS NAVGQRVPQHRNVIEAARRAGVELLAYTSILHADTSTLSLAAEHVATEALLRESGVPHALLRNGWYTENYTGSIAAEVAH GAVIGSAGDGKISAATRADYAAAAAAVLASDAPQAGQVYELAGDAAFTMAEYAAEVAQQSGKPVAYHDLPEADYAAALVQ IGLPAGFAQVLAQCSAASRDGALFDESQTLGRLIGRPTTPLRDAVAAALAAR >Mature_291_residues TSTSPLILVTGASGQLGALVVEALLGHLPANRIVATARDTASLAEFAKRDIAVRQADYANPQSLDTAFAGVGRVLLVSSN AVGQRVPQHRNVIEAARRAGVELLAYTSILHADTSTLSLAAEHVATEALLRESGVPHALLRNGWYTENYTGSIAAEVAHG AVIGSAGDGKISAATRADYAAAAAAVLASDAPQAGQVYELAGDAAFTMAEYAAEVAQQSGKPVAYHDLPEADYAAALVQI GLPAGFAQVLAQCSAASRDGALFDESQTLGRLIGRPTTPLRDAVAAALAAR
Specific function: Quinone oxidoreductase that may play some additional role beyond quinone reduction. Potential redox sensor protein. Overexpression induces retardation of growth [H]
COG id: COG0702
COG function: function code MG; Predicted nucleoside-diphosphate-sugar epimerases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the NmrA-type oxidoreductase family [H]
Homologues:
Organism=Escherichia coli, GI1790656, Length=280, Percent_Identity=55.3571428571429, Blast_Score=287, Evalue=6e-79,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016040 - InterPro: IPR008030 [H]
Pfam domain/function: PF05368 NmrA [H]
EC number: =1.6.5.2 [H]
Molecular weight: Translated: 29908; Mature: 29777
Theoretical pI: Translated: 5.29; Mature: 5.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 0.3 %Met (Mature Protein) 0.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSTSPLILVTGASGQLGALVVEALLGHLPANRIVATARDTASLAEFAKRDIAVRQADYA CCCCCCEEEEECCCCCHHHHHHHHHHHHCCCCCEEEECHHHHHHHHHHHHHHHHHHCCCC NPQSLDTAFAGVGRVLLVSSNAVGQRVPQHRNVIEAARRAGVELLAYTSILHADTSTLSL CCHHHHHHHHCCCEEEEEECCHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHH AAEHVATEALLRESGVPHALLRNGWYTENYTGSIAAEVAHGAVIGSAGDGKISAATRADY HHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCHHHHHHHCCEEEECCCCCCEEHHHHHHH AAAAAAVLASDAPQAGQVYELAGDAAFTMAEYAAEVAQQSGKPVAYHDLPEADYAAALVQ HHHHHHHHHCCCCCCCCEEECCCCHHHHHHHHHHHHHHHCCCCEEECCCCCHHHHHHHHH IGLPAGFAQVLAQCSAASRDGALFDESQTLGRLIGRPTTPLRDAVAAALAAR HCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHCC >Mature Secondary Structure TSTSPLILVTGASGQLGALVVEALLGHLPANRIVATARDTASLAEFAKRDIAVRQADYA CCCCCEEEEECCCCCHHHHHHHHHHHHCCCCCEEEECHHHHHHHHHHHHHHHHHHCCCC NPQSLDTAFAGVGRVLLVSSNAVGQRVPQHRNVIEAARRAGVELLAYTSILHADTSTLSL CCHHHHHHHHCCCEEEEEECCHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHH AAEHVATEALLRESGVPHALLRNGWYTENYTGSIAAEVAHGAVIGSAGDGKISAATRADY HHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCHHHHHHHCCEEEECCCCCCEEHHHHHHH AAAAAAVLASDAPQAGQVYELAGDAAFTMAEYAAEVAQQSGKPVAYHDLPEADYAAALVQ HHHHHHHHHCCCCCCCCEEECCCCHHHHHHHHHHHHHHHCCCCEEECCCCCHHHHHHHHH IGLPAGFAQVLAQCSAASRDGALFDESQTLGRLIGRPTTPLRDAVAAALAAR HCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7610040; 9278503 [H]