| Definition | Xanthomonas campestris pv. vesicatoria str. 85-10 chromosome, complete genome. |
|---|---|
| Accession | NC_007508 |
| Length | 5,178,466 |
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The map label for this gene is 78045879
Identifier: 78045879
GI number: 78045879
Start: 370617
End: 371342
Strand: Reverse
Name: 78045879
Synonym: XCV0323
Alternate gene names: NA
Gene position: 371342-370617 (Counterclockwise)
Preceding gene: 78045881
Following gene: 78045876
Centisome position: 7.17
GC content: 65.84
Gene sequence:
>726_bases TTGACCTCGACTGCGCTTGAGGTCGTTCAATGCCGGTTTTCCAACGACATTGCCGCCATGCATCTGCGTCATCTGGTACT GCCCTGCCTGGACCCCGACCTGACCCTGCGCTTCTACCGCGATGTACTGCAGTTGCCCATCCATGGCAACGCGGTGCGCA TCGGCTGGAGCACACTGGAGTGCGTGCAGGCGCAGCGGCCGGTGGGCAGCGTGCATCTGGCCTTCAACGTGGCCCCGTCG CGCTTCCAAGCCGCTGCGCAGTGGATTGGCGCACGCGCCACCTTGCTGAGCGATGCACACGGTCGCGAGCATTTCGCCCT GGACGGCGTGTGGCAGTCGCACTCGGTGTACTTCGCCGGGCCCGATGGCGCAGTGCTGGAGTTGATCGCGCGCAATGCCT TGCAGGATGCACCGGTCGGTGACGGCCAGTTCGGCGGCGAAGAACTGCTGTGCCTGAGCGAAATCGGCCTGCCTAGCAAC AATGTCGAGGTGGTGACACGCAGCCTGGCGCATCACTTCGGCCTGCAACCGTTCGCCCCGCCGCTGGAGGGCTTTGCGGC CTTGGGCGATGACCACGGCCTGTTGATCGTGGTCGACCAGCGCCGGCGGTGGTTTCCGCAACAACGGCAACTGCCCTGGG CTGACGGCCTGCGCATCAGCGTGGACGCGCCAGAACCCGGCCTGCACCTGCGCGATGCGCAGGGGTGGGAATTGCTGGCC GCGTAA
Upstream 100 bases:
>100_bases GAAATCGATCGATGCCAGCAATTGCAGGCAAAACTCAGCCAGGTCAGCCCGCCGGCCGGCACTTACTCACCACCGGTTAC GACGCGCAGAGTGGAAACGC
Downstream 100 bases:
>100_bases ACTTCCGCGCGCAGCAGCACTGCGCTCACCGCCGGCAGGTACGGCCGGCTCGGTGCGGCATGCGGCACGGTGCACTGCGG TAACAGCGCGCCATTGCGGC
Product: hypothetical protein
Products: NA
Alternate protein names: Glyoxalase/Bleomycin Resistance Protein; Ring-Cleavage Extradiol Dioxygenase
Number of amino acids: Translated: 241; Mature: 240
Protein sequence:
>241_residues MTSTALEVVQCRFSNDIAAMHLRHLVLPCLDPDLTLRFYRDVLQLPIHGNAVRIGWSTLECVQAQRPVGSVHLAFNVAPS RFQAAAQWIGARATLLSDAHGREHFALDGVWQSHSVYFAGPDGAVLELIARNALQDAPVGDGQFGGEELLCLSEIGLPSN NVEVVTRSLAHHFGLQPFAPPLEGFAALGDDHGLLIVVDQRRRWFPQQRQLPWADGLRISVDAPEPGLHLRDAQGWELLA A
Sequences:
>Translated_241_residues MTSTALEVVQCRFSNDIAAMHLRHLVLPCLDPDLTLRFYRDVLQLPIHGNAVRIGWSTLECVQAQRPVGSVHLAFNVAPS RFQAAAQWIGARATLLSDAHGREHFALDGVWQSHSVYFAGPDGAVLELIARNALQDAPVGDGQFGGEELLCLSEIGLPSN NVEVVTRSLAHHFGLQPFAPPLEGFAALGDDHGLLIVVDQRRRWFPQQRQLPWADGLRISVDAPEPGLHLRDAQGWELLA A >Mature_240_residues TSTALEVVQCRFSNDIAAMHLRHLVLPCLDPDLTLRFYRDVLQLPIHGNAVRIGWSTLECVQAQRPVGSVHLAFNVAPSR FQAAAQWIGARATLLSDAHGREHFALDGVWQSHSVYFAGPDGAVLELIARNALQDAPVGDGQFGGEELLCLSEIGLPSNN VEVVTRSLAHHFGLQPFAPPLEGFAALGDDHGLLIVVDQRRRWFPQQRQLPWADGLRISVDAPEPGLHLRDAQGWELLAA
Specific function: Unknown
COG id: COG2514
COG function: function code R; Predicted ring-cleavage extradiol dioxygenase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26435; Mature: 26304
Theoretical pI: Translated: 5.92; Mature: 5.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSTALEVVQCRFSNDIAAMHLRHLVLPCLDPDLTLRFYRDVLQLPIHGNAVRIGWSTLE CCCHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCEEEECHHHHH CVQAQRPVGSVHLAFNVAPSRFQAAAQWIGARATLLSDAHGREHFALDGVWQSHSVYFAG HHHHCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCEECCCEEEEEC PDGAVLELIARNALQDAPVGDGQFGGEELLCLSEIGLPSNNVEVVTRSLAHHFGLQPFAP CCHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEHHCCCCCCCHHHHHHHHHHHCCCCCCCC PLEGFAALGDDHGLLIVVDQRRRWFPQQRQLPWADGLRISVDAPEPGLHLRDAQGWELLA CHHHHHHCCCCCCEEEEECCCCCCCCHHCCCCCCCCEEEEECCCCCCCEEECCCCCEEEC A C >Mature Secondary Structure TSTALEVVQCRFSNDIAAMHLRHLVLPCLDPDLTLRFYRDVLQLPIHGNAVRIGWSTLE CCHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCEEEECHHHHH CVQAQRPVGSVHLAFNVAPSRFQAAAQWIGARATLLSDAHGREHFALDGVWQSHSVYFAG HHHHCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCEECCCEEEEEC PDGAVLELIARNALQDAPVGDGQFGGEELLCLSEIGLPSNNVEVVTRSLAHHFGLQPFAP CCHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEHHCCCCCCCHHHHHHHHHHHCCCCCCCC PLEGFAALGDDHGLLIVVDQRRRWFPQQRQLPWADGLRISVDAPEPGLHLRDAQGWELLA CHHHHHHCCCCCCEEEEECCCCCCCCHHCCCCCCCCEEEEECCCCCCCEEECCCCCEEEC A C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA